Miyakogusa Predicted Gene
- Lj1g3v4995150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4995150.1 Non Chatacterized Hit- tr|K3Z5F8|K3Z5F8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021776,61.43,3e-19,Eukaryotic type KH-domain (KH-domain type
I),NULL; no description,NULL; KH_1,K Homology domain,
type,CUFF.33905.1
(132 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g40840.1 120 5e-28
Glyma19g43540.1 117 5e-27
Glyma10g03910.1 107 3e-24
Glyma03g31670.1 107 3e-24
Glyma19g34470.1 107 3e-24
Glyma03g31670.3 107 5e-24
Glyma03g31670.2 106 6e-24
Glyma10g03910.2 106 6e-24
Glyma15g18010.1 94 3e-20
Glyma13g00510.1 94 3e-20
Glyma09g06750.1 94 3e-20
Glyma17g06640.1 92 2e-19
Glyma02g15850.1 79 2e-15
Glyma18g49600.1 52 2e-07
Glyma09g37070.2 52 2e-07
Glyma09g37070.1 52 2e-07
Glyma08g07190.1 51 3e-07
Glyma07g30120.1 49 1e-06
Glyma13g05520.1 49 1e-06
Glyma09g38290.1 49 2e-06
Glyma13g05520.3 49 2e-06
Glyma13g05520.2 49 2e-06
Glyma19g02840.2 49 2e-06
Glyma19g02840.3 49 2e-06
Glyma19g02840.1 49 2e-06
Glyma08g10330.1 48 2e-06
Glyma05g27340.1 48 3e-06
Glyma06g09460.1 48 3e-06
Glyma13g32960.2 47 4e-06
Glyma18g48080.1 47 4e-06
Glyma13g32960.3 47 4e-06
Glyma13g32960.1 47 4e-06
>Glyma03g40840.1
Length = 443
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 58/62 (93%)
Query: 45 AEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQ 104
AEKKWPGWPGESVFRMLVPA KVGGIIGRKGEFIKKIVEETRARVKILDGPPGT +RAV
Sbjct: 33 AEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVM 92
Query: 105 CS 106
S
Sbjct: 93 IS 94
>Glyma19g43540.1
Length = 446
Score = 117 bits (292), Expect = 5e-27, Method: Composition-based stats.
Identities = 57/65 (87%), Positives = 59/65 (90%)
Query: 42 IAAAEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPER 101
+ AEKKWPGWPGESVFRMLVPA KVGGIIGRKGEFIKKIVEETRARVKILDGPPGT +R
Sbjct: 33 VVVAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQR 92
Query: 102 AVQCS 106
AV S
Sbjct: 93 AVMIS 97
>Glyma10g03910.1
Length = 565
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFI+KI E+T+AR+KILDGPPGT ERAV S
Sbjct: 153 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVS 212
>Glyma03g31670.1
Length = 529
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFIKKI EET+AR+KILDGPPG ERAV S
Sbjct: 117 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVS 176
>Glyma19g34470.1
Length = 528
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFIKKI EET+AR+KILDGPPG ERAV S
Sbjct: 116 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVS 175
>Glyma03g31670.3
Length = 452
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFIKKI EET+AR+KILDGPPG ERAV S
Sbjct: 117 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVS 176
>Glyma03g31670.2
Length = 405
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFIKKI EET+AR+KILDGPPG ERAV S
Sbjct: 117 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVS 176
>Glyma10g03910.2
Length = 473
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 47 KKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
KKWPGWPGE+VFRMLVP KVG IIGRKGEFI+KI E+T+AR+KILDGPPGT ERAV S
Sbjct: 153 KKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVS 212
>Glyma15g18010.1
Length = 234
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 46 EKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQC 105
EK+WPGWPG+ VFR++VP KVG IIGRKGE IKK+ EETR+R+++LD P GTP+R V
Sbjct: 51 EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV 110
Query: 106 S 106
S
Sbjct: 111 S 111
>Glyma13g00510.1
Length = 436
Score = 94.4 bits (233), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 51/66 (77%)
Query: 41 PIAAAEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPE 100
P AAAEK+WPGWPG VFR++VP KVG IIGRKGE IKK EET+AR+++LDG GT +
Sbjct: 31 PDAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSD 90
Query: 101 RAVQCS 106
R V S
Sbjct: 91 RIVLIS 96
>Glyma09g06750.1
Length = 443
Score = 94.0 bits (232), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 46 EKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQC 105
EK+WPGWPG+ VFR++VP KVG IIGRKGE IKK+ EETR+R+++LD P GTP+R V
Sbjct: 43 EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV 102
Query: 106 S 106
S
Sbjct: 103 S 103
>Glyma17g06640.1
Length = 436
Score = 91.7 bits (226), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 43 AAAEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERA 102
AAAEK+WPGWPG VFR++VP KVG IIGRKGE IKK EET+AR+++LDG GT +R
Sbjct: 33 AAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRI 92
Query: 103 VQCS 106
V S
Sbjct: 93 VLIS 96
>Glyma02g15850.1
Length = 348
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 40/47 (85%)
Query: 60 MLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
MLVP KVG IIGRKGEFI+KI EET+AR+KILDGPPGT ERAV S
Sbjct: 1 MLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGTAERAVMVS 47
>Glyma18g49600.1
Length = 543
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++VFR L P K+G +IGR G+ +K++ +T+A+++I D PG ER V
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVV 91
>Glyma09g37070.2
Length = 540
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++VFR L P K+G +IGR G+ +K++ +T+A+++I D PG ER V
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVV 91
>Glyma09g37070.1
Length = 540
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++VFR L P K+G +IGR G+ +K++ +T+A+++I D PG ER V
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVV 91
>Glyma08g07190.1
Length = 624
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 58 FRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
FR+L A +VG IIG+ G IK + E T A+++I+D PP +P+R + S
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVS 75
>Glyma07g30120.1
Length = 590
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 58 FRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
FR+L A +VG IIG+ G IK + E T A+++I D PP +P+R + S
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVS 75
>Glyma13g05520.1
Length = 561
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma09g38290.1
Length = 258
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 41 PIAAAEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPE 100
P +A K+ G + +FR++VP+ ++G +IG++G I+KI E+T+A +KI D E
Sbjct: 8 PEQSAAKRAKGQ--DVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEE 65
Query: 101 RAVQCSNFKGND 112
R + S+ K ND
Sbjct: 66 RVIIISS-KDND 76
>Glyma13g05520.3
Length = 548
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma13g05520.2
Length = 548
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma19g02840.2
Length = 533
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma19g02840.3
Length = 548
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma19g02840.1
Length = 548
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 ESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
++V+R + P K+G +IGR GE +K++ ET+A+++I + PG ER V
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVV 89
>Glyma08g10330.1
Length = 625
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 57 VFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCSNF 108
V+R+L P +G +IG+ G+ I I +ETRA+VK++D PG+ +R + +
Sbjct: 38 VYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCY 89
>Glyma05g27340.1
Length = 621
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 57 VFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
V+R+L P +G +IG+ G+ I I +ETRA+VKI+D PG +R +
Sbjct: 38 VYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKIVDPFPGAKDRVI 84
>Glyma06g09460.1
Length = 528
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 53 PGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAVQCS 106
PG VFR+L A ++GG+IG+ G I +I +ET +++I + PG ER + S
Sbjct: 20 PGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITIS 73
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 57 VFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGT 98
FR+L PA +VG IIG+ G IK + +ET + +K+L+ PP +
Sbjct: 245 TFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDS 286
>Glyma13g32960.2
Length = 684
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 54 GESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
G FR+L A ++GG+IG+ G IK + + T A+++I D P +P+R +
Sbjct: 43 GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVI 92
>Glyma18g48080.1
Length = 338
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 41 PIAAAEKKWPGWPGESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPE 100
P +A K+ G + +FR++VP+ +G +IG++G I+KI E+T+A +KI D E
Sbjct: 42 PDQSAAKRAKGQ--DVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEE 99
Query: 101 RAVQCSNFKGND 112
R + S+ K ND
Sbjct: 100 RVIIISS-KDND 110
>Glyma13g32960.3
Length = 604
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 54 GESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
G FR+L A ++GG+IG+ G IK + + T A+++I D P +P+R +
Sbjct: 43 GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVI 92
>Glyma13g32960.1
Length = 685
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 54 GESVFRMLVPAHKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTPERAV 103
G FR+L A ++GG+IG+ G IK + + T A+++I D P +P+R +
Sbjct: 43 GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVI 92