Miyakogusa Predicted Gene

Lj1g3v4984110.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4984110.1 Non Chatacterized Hit- tr|I1M0W6|I1M0W6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.08,8e-17,seg,NULL,CUFF.33765.1
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36460.1                                                       255   2e-68
Glyma13g27170.1                                                        94   2e-19

>Glyma12g36460.1 
          Length = 883

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/257 (56%), Positives = 178/257 (69%), Gaps = 12/257 (4%)

Query: 1   MEAAIDVLPPKRPASSGISP--QGHKRLKLSSDSLPYSAHDKAVPEAPTN--VEDFSNPF 56
           ME+A DV   KRP  +G SP   G KRL+LSSDSLPY A D+  P+ P N  V D+SNPF
Sbjct: 1   MESADDVSASKRPLPTGFSPGPDGPKRLRLSSDSLPYPACDQIEPKTPKNPNVVDYSNPF 60

Query: 57  AISDFLNRLESGKFGSVTKDIEALITRKMQVLGPFFAKFPKLVTQSLKVVVNHDEESNKL 116
           AI+D L+RLE+GKFGSVTKDIEALI  KMQ++GP+FAK+P LV Q LKVV +HDEE+ KL
Sbjct: 61  AITDILDRLENGKFGSVTKDIEALIALKMQIMGPYFAKYPILVNQLLKVVTHHDEETPKL 120

Query: 117 ENKKGTIMSHDKVVDLEEEHTKKDASAA-QPVVIIDSDEEDDRDKNSSLPFNEEMIPNSL 175
           EN++ T ++H  V+DLE E+T+KD  A    VVIIDSDEEDDRDK S +PF+E ++P  +
Sbjct: 121 ENQQVTGLTHQSVIDLEGEYTEKDVPAVPNTVVIIDSDEEDDRDKKSVIPFHEVVLPRKV 180

Query: 176 Q-SPALRKMGYRAPIAYHGESEDLKFEPTRAAK-DKTQRDKGVYVGVQXXXXXXXXXX-- 231
             SPAL+ +GY     Y GES DLK E   A K + T+ +KGVYVG Q            
Sbjct: 181 APSPALKVIGYH---TYLGESNDLKIEINMADKGNNTRSNKGVYVGAQGEEEDKADTEDD 237

Query: 232 XXXXIWREMSMAVECSK 248
               IW+EMSMA+ECSK
Sbjct: 238 GLQDIWKEMSMAIECSK 254


>Glyma13g27170.1 
          Length = 824

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 24/122 (19%)

Query: 68  GKFGSVTKDIEALITRKMQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENKKGTIMSHD 127
           GK+GSVTKDIEAL  R+M+VLGP+ AK+PKL  Q +  V++ DEE  K E+++ T ++H 
Sbjct: 2   GKYGSVTKDIEALFARRMKVLGPYLAKYPKL-NQLIHAVIDRDEEILKSEDQQVTGLTHQ 60

Query: 128 KVVDLEE---------------------EHTKKDASAAQ--PVVIIDSDEEDDRDKNSSL 164
            V+DLE                      E+T+KD  AAQ   ++ IDSDEEDD DK S +
Sbjct: 61  NVIDLETPKLEVQQITGLTLQNVIDLEGENTEKDVHAAQIHGLIHIDSDEEDDGDKKSIV 120

Query: 165 PF 166
           P+
Sbjct: 121 PY 122