Miyakogusa Predicted Gene
- Lj1g3v4957760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4957760.1 Non Chatacterized Hit- tr|I1Q8L6|I1Q8L6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,42.42,0.000000000000001,PROTEIN BICAUDAL D HOMOLOG 2 (BIC-D 2)
[SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q8TD16],NULL;
SERINE/THREONI,CUFF.33752.1
(311 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g40550.1 407 e-113
Glyma20g37180.1 337 1e-92
Glyma19g43210.1 313 2e-85
Glyma20g28410.1 206 3e-53
Glyma10g39390.1 163 2e-40
Glyma10g30210.1 108 8e-24
Glyma07g05930.1 53 4e-07
Glyma06g18630.1 53 4e-07
Glyma04g36260.1 52 1e-06
Glyma01g32450.1 51 2e-06
>Glyma03g40550.1
Length = 629
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/345 (64%), Positives = 246/345 (71%), Gaps = 42/345 (12%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNFCINC 61
DTALSVATEMVAELDITDQDV+ IADMIDGEIASLVPEW+PGPGIEET H N FC NC
Sbjct: 292 DTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHHLNNFFCHNC 351
Query: 62 VSNHASGGTDMDLMSHSQGGNGKNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVTEDA 121
VS H SGG M+ +SH+Q GKN QL QCCRHGC SMHGRFEEITF S E DNHV DA
Sbjct: 352 VSIHTSGGNVMEFLSHNQC--GKNSQLPQCCRHGCTSMHGRFEEITFPS-ECDNHVRGDA 408
Query: 122 PNISSQSDCLQYQESWNHHESRELSPVESVRSHSDDQYEHLDKSALAEDKGHD-VWENNV 180
P SSQSDCLQ QESWNHHES ELSPVES SHS +Q+ DK LAEDKG +WEN
Sbjct: 409 PIKSSQSDCLQRQESWNHHESCELSPVESDESHSGEQF---DKPVLAEDKGKKGIWENKF 465
Query: 181 --------------------------ENEYEKEIQQELRWLRAKYQMELMELKDKQLGLA 214
E EYEKE++QE+RW++AK+ E EL DK+ G+A
Sbjct: 466 AHDPGNPPRSLSGNYFSAIRFLCCGPEIEYEKEVRQEMRWIKAKHNRESRELGDKRFGIA 525
Query: 215 ATA---DRKQHKTEQDFMALPLTETAKEDH-GIHLKPFGNNWNCDSSCESQVQKSHPNLD 270
+ ++HKTEQ M PL +TA H GIHLKP GN WN +SSC SQVQK+HPNLD
Sbjct: 526 TESSHTSNREHKTEQCIMP-PLPQTANGVHNGIHLKPLGNIWNYESSCRSQVQKNHPNLD 584
Query: 271 TQRAQNCEVMCSHGEGMVTAKSFYTG----TLHRTVSLPVDAVDV 311
TQRAQNCEVMCSH EGMVT KSFYTG TLHRTVSLPVDAVDV
Sbjct: 585 TQRAQNCEVMCSHKEGMVTEKSFYTGSLRDTLHRTVSLPVDAVDV 629
>Glyma20g37180.1
Length = 698
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/338 (55%), Positives = 220/338 (65%), Gaps = 64/338 (18%)
Query: 1 MDTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNFCIN 60
+DTA+SVATEMVAELD+TDQDV+RIADMIDGEIASLVPEWRPGPGI+ET +AN+ FC N
Sbjct: 398 LDTAISVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRYANEGFCHN 457
Query: 61 CVSNHASGGTDMDLMSHSQGGNGKNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVTED 120
CVSNH S G+ +D +S++ G KNLQLL+CCRHGCASMHGRF EITFQSE+
Sbjct: 458 CVSNHTSSGSFLDFLSNNPG--NKNLQLLECCRHGCASMHGRFGEITFQSED-------- 507
Query: 121 APNISSQSDCLQYQESWNHHESRELSPVESVRSHSDDQYEHLDKSALAEDKGHDVWEN-- 178
LQYQE WN HESRELSPVES +SHSD+Q E LDK A+DK DVWE
Sbjct: 508 ----------LQYQELWNQHESRELSPVESDQSHSDEQCEQLDKPIPAKDKAQDVWEKKF 557
Query: 179 -------------------------NVENEYEKEIQQELRWLRAKYQMELMELKDKQLGL 213
++E++YEKEIQ+ELRWLRAKYQMEL + KD Q G
Sbjct: 558 SPNAANSLRNLSGSHDFSTIRSTYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDGQFGQ 617
Query: 214 AATADRKQHKTEQDFMALPLTETAKEDHGIHLKPFGNNWNCDSSCESQVQKSHPNLDTQR 273
+ + +H+TE F++ LTET K GNN + V +S PN DTQR
Sbjct: 618 CSHSSNSEHRTENGFLSPSLTETLKG---------GNN---GTRSHPHVHESSPNSDTQR 665
Query: 274 AQNCEVMCSHGEGMVTAKSFYTGTLHRTVSLPVDAVDV 311
AQNCE + S GEG + S LHRTVSLPVDAVD+
Sbjct: 666 AQNCEAIESPGEGSLLPHS-----LHRTVSLPVDAVDI 698
>Glyma19g43210.1
Length = 680
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/338 (53%), Positives = 207/338 (61%), Gaps = 78/338 (23%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNFCINC 61
DTALSVATEMVAELDITDQDV+ I+DMIDGEIASLVPEW+PGPGIEET H+ N+ C NC
Sbjct: 393 DTALSVATEMVAELDITDQDVTSISDMIDGEIASLVPEWKPGPGIEETNHYLNKIVCHNC 452
Query: 62 VSNHASGGTDMDLMSHSQGGNGKNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVTEDA 121
VSN KNLQL QCCRHGCASMHGRFEEITF S E DNHV DA
Sbjct: 453 VSNQGR----------------KNLQLPQCCRHGCASMHGRFEEITFPS-ECDNHVRGDA 495
Query: 122 PNISSQSDCLQYQESWNHHESRELSPVESVRSHSDDQYEHLDKSALAEDK-GHDVWENNV 180
P SSQSDCLQYQESWNHHES ELSPVES +SHS +QYE DK LAEDK G +WEN
Sbjct: 496 PIKSSQSDCLQYQESWNHHESCELSPVESDQSHSGEQYEQFDKPVLAEDKEGKGIWENKF 555
Query: 181 --------------------------ENEYEKEIQQELRWLRAKYQMELMELKDKQLGLA 214
ENEYEKE+QQE+RW++AK++ E +L+DK
Sbjct: 556 AHDPGNPPRSLSGNYFSAIRFLCCGPENEYEKEVQQEMRWIKAKHERESRKLRDKL---- 611
Query: 215 ATADRKQHKTEQDFMALPLTETAKE-DHGIHLKPFGNNWNCDSSCESQVQKSHPNLDTQR 273
+HKT+Q M PL +T DHGIHLKP GN WN DS + +++ P
Sbjct: 612 ------EHKTQQGIMP-PLPQTVNGVDHGIHLKPLGNFWNYDSVAVLKSKRTTP------ 658
Query: 274 AQNCEVMCSHGEGMVTAKSFYTGTLHRTVSLPVDAVDV 311
+ G +V RTVSLPVDAVD+
Sbjct: 659 -----IWAPKGPKIV-----------RTVSLPVDAVDI 680
>Glyma20g28410.1
Length = 505
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 186/340 (54%), Gaps = 40/340 (11%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNFCINC 61
DTALSVA EMVAELDI DQDV+ +A MID EIA LVPEW+ GP IEE + ++ + C+NC
Sbjct: 176 DTALSVANEMVAELDINDQDVTNLASMIDNEIARLVPEWKTGPRIEEKSECSSASVCLNC 235
Query: 62 VSNHASGGTDMDLMSHSQGGNGKNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVTEDA 121
+N G+ D +S S GKNLQ L C + GCA++HGRFEEIT+Q E +N E A
Sbjct: 236 AAN----GSLFDYVS-SNNPCGKNLQFLHCSKTGCAAVHGRFEEITYQVEGSENSAREGA 290
Query: 122 PNISSQSDCLQYQESWNHHESRELSPVESVRSHSDDQYEHLDKSALAEDK---------- 171
+ SSQS+ +QY + W + +L E H D +E + S + ED+
Sbjct: 291 LDESSQSNGIQYTDIWAQRDEPDLCHEELKEMHCDQAHEASNSSNIKEDRKTVNVDEQSD 350
Query: 172 ------GHDVWENNVENEYEKEIQQELRWLRAKYQMELMELKDKQLG-------LAATAD 218
+ N V +YE EI+QELRWL+AKYQM+L EL+D+QLG ++ +
Sbjct: 351 LNTKKSSSNPAPNCVFLDYENEIRQELRWLKAKYQMQLRELRDQQLGRKPKFTSISPDPE 410
Query: 219 RKQHKTEQDFMALPLTETAKEDHGIHLKPFGNNWNCDSSCESQVQKSHPNLDTQRAQNCE 278
+ +H + + L T K + KP + +K + L Q QN +
Sbjct: 411 KLEH-LKDGILRLSDTPNLKIQNN---KPLLRTIVSGKHFHVESEKCN-TLADQMVQNVD 465
Query: 279 VMCSHG--EGMVTAKSFYTG-----TLHRTVSLPVDAVDV 311
+C E M+TA+ F+TG +L R SLPVDAVDV
Sbjct: 466 EICQSNSPEQMITARDFFTGVLLPHSLQRATSLPVDAVDV 505
>Glyma10g39390.1
Length = 652
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 160/315 (50%), Gaps = 68/315 (21%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNFCINC 61
DTALSVA EMVAELDI DQDV+ +A+MID EIA+LVPEW+ GP IEE + ++ + C+NC
Sbjct: 401 DTALSVANEMVAELDINDQDVTNLANMIDNEIATLVPEWKTGPIIEEKSECSSASVCLNC 460
Query: 62 VSNHASGGTDMDLMSHSQGGNGKNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVTEDA 121
+N G D + S GKNLQ L C + GCA++HGRFEEIT+Q E N E A
Sbjct: 461 AAN----GYLFDYVL-SNNPCGKNLQFLHCSKTGCAAVHGRFEEITYQVEGSKNSARE-A 514
Query: 122 PNISSQSDCLQYQESWNHHESRELSPVESVRSHSDDQYEHLDKSALAEDKGHDVWENNVE 181
S+ S+ + ++ N E +L + R S + N V
Sbjct: 515 HEASNSSNIKEDGKTINVDEQSDL----NTRKPSSNP-----------------APNCVF 553
Query: 182 NEYEKEIQQELRWLRAKYQMELMELKDKQLGLAATADRKQHKTEQDFMALPLTETAKEDH 241
+YE EI+QELRWL+AKYQM+L EL+D+QLG + F ++ + D
Sbjct: 554 LDYENEIRQELRWLKAKYQMQLRELRDQQLG-----------GKPKFTSI----SPDTDK 598
Query: 242 GIHLKPFGNNWNCDSSCESQVQKSHPNLDTQRAQNCEVMCSHGEGMVTAKSFYTG----- 296
HLK + ++Q + P L T F+TG
Sbjct: 599 LEHLK--DGILRLSDASNLKIQNNKPLLKTI-------------------DFFTGVLLPH 637
Query: 297 TLHRTVSLPVDAVDV 311
+L R SLPVDAVDV
Sbjct: 638 SLQRATSLPVDAVDV 652
>Glyma10g30210.1
Length = 480
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Query: 1 MDTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGPGIEETTHFANQNF--- 57
MDTA+SVATEMVAELD+TDQDV+RIADMIDGEIASLVPEWRPGPGI+ET FANQ
Sbjct: 398 MDTAISVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGMDVL 457
Query: 58 -CINCVSNHASGGTDMDLM 75
C++ + S M +M
Sbjct: 458 QCMDGLGRLPSNLKSMTIM 476
>Glyma07g05930.1
Length = 710
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWRPGP 44
DTA+SVATEMV L++ D DV IA++ID I L+P W+P P
Sbjct: 438 DTAVSVATEMVEHLELADHDVDFIAELIDYLIMKLLPWWKPSP 480
>Glyma06g18630.1
Length = 567
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEW 40
DT++SVA+EMV EL++TDQDV+ IA MID EI +P W
Sbjct: 346 DTSISVASEMVEELELTDQDVTTIAGMIDSEIRYHIPSW 384
>Glyma04g36260.1
Length = 569
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEW 40
DT++SVA EMV EL++TDQDV+ IA MID EI +P W
Sbjct: 326 DTSISVAGEMVEELELTDQDVTTIARMIDSEIRYHIPSW 364
>Glyma01g32450.1
Length = 505
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 2 DTALSVATEMVAELDITDQDVSRIADMIDGEIASLVPEWR 41
DTA+ VA EMV EL+I+D + IA MI+ EI++LVP+WR
Sbjct: 261 DTAIDVAMEMVKELEISDLEPLEIAKMIEEEISALVPKWR 300