Miyakogusa Predicted Gene

Lj1g3v4955480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4955480.1 Non Chatacterized Hit- tr|D8SA29|D8SA29_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.13,1e-18,seg,NULL; no description,NULL; SEC-C,SEC-C
motif,CUFF.33723.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43000.1                                                       266   9e-72
Glyma03g40380.1                                                       177   1e-44

>Glyma19g43000.1 
          Length = 211

 Score =  266 bits (681), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 133/210 (63%), Positives = 153/210 (72%), Gaps = 4/210 (1%)

Query: 6   ITIANKIHHRLSQYSNS--RSIFSTPQLQNSWVDXXXXXXXXXXXXXXXXXXXXXXXXFT 63
           + I NKI + ++Q      R+I ST QLQ SW++                        F+
Sbjct: 4   LRILNKICYSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASES--FS 61

Query: 64  LLHFADEMKKARKIGAFKDYVVGRSSEVTFTTAFEKNEAIIRFLGVLDPTGEKLQSXXXX 123
           LL FADEMK A++IGAFK+++VGRSSE TF++AF+K EAIIRFLG LDPTGE LQ+    
Sbjct: 62  LLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQKQ 121

Query: 124 XXXXHCNCTIIDVENALAKFTWAKEAQKKIEKLKEEGKPMPTSIAEVQKLVGSSPLDHAR 183
               HCNCTI DVENALAKFTWAKEAQKK+EKLKEEGKPMP S AEVQKLVGS+PLD AR
Sbjct: 122 EAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQKLVGSTPLDLAR 181

Query: 184 SNLAQSGQISRNAPCPCGSKKRYKRCCAKD 213
           SNLAQ+GQISRNA CPCGSKKRYKRCC KD
Sbjct: 182 SNLAQAGQISRNALCPCGSKKRYKRCCGKD 211


>Glyma03g40380.1 
          Length = 198

 Score =  177 bits (448), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 112/173 (64%), Gaps = 4/173 (2%)

Query: 6   ITIANKIHHRLSQYSNS--RSIFSTPQLQNSWVDXXXXXXXXXXXXXXXX--XXXXXXXX 61
           + I NKI + ++Q      R+I ST QLQ SW++                          
Sbjct: 4   LRILNKICYSINQNCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVTSDS 63

Query: 62  FTLLHFADEMKKARKIGAFKDYVVGRSSEVTFTTAFEKNEAIIRFLGVLDPTGEKLQSXX 121
           FTLL FADEMK A++IGAFK+++ GRSSE TF++AF+K EAIIR LG LDPTGE L +  
Sbjct: 64  FTLLRFADEMKNAKRIGAFKEFMAGRSSEATFSSAFDKYEAIIRSLGALDPTGENLPTAQ 123

Query: 122 XXXXXXHCNCTIIDVENALAKFTWAKEAQKKIEKLKEEGKPMPTSIAEVQKLV 174
                 HCNCTI DVE+ALAKFTWAKEAQKKI+KLKEEGKPMP S AEV  L+
Sbjct: 124 KQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVMLLI 176