Miyakogusa Predicted Gene

Lj1g3v4955350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4955350.1 tr|Q56VR6|Q56VR6_LOTJA Superoxide dismutase
[Cu-Zn] OS=Lotus japonicus GN=sodCc PE=2 SV=1,100,0,Cu,Zn superoxide
dismutase-like,Superoxide dismutase, copper/zinc binding domain; no
description,Sup,CUFF.33903.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g40280.3                                                       261   2e-70
Glyma03g40280.1                                                       261   2e-70
Glyma19g42890.2                                                       261   2e-70
Glyma19g42890.1                                                       261   2e-70
Glyma16g27020.2                                                       209   1e-54
Glyma16g27020.1                                                       202   1e-52
Glyma12g08650.1                                                       202   2e-52
Glyma11g19840.2                                                       201   2e-52
Glyma11g19840.3                                                       195   2e-50
Glyma11g19840.1                                                       193   5e-50
Glyma12g30260.1                                                       190   5e-49
Glyma19g42890.3                                                       178   2e-45
Glyma03g40280.2                                                       150   6e-37
Glyma05g04170.1                                                        60   1e-09

>Glyma03g40280.3 
          Length = 152

 Score =  261 bits (668), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/152 (86%), Positives = 139/152 (91%)

Query: 1   MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLGSS+ V GTI F QEG GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHA 120
            HFNP  KEHGAPED  RHAGDLGNV VGDDGT SF+ITDSQIPLTGPN+IIGRAVVVHA
Sbjct: 61  SHFNPNNKEHGAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
           DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152


>Glyma03g40280.1 
          Length = 152

 Score =  261 bits (668), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/152 (86%), Positives = 139/152 (91%)

Query: 1   MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLGSS+ V GTI F QEG GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHA 120
            HFNP  KEHGAPED  RHAGDLGNV VGDDGT SF+ITDSQIPLTGPN+IIGRAVVVHA
Sbjct: 61  SHFNPNNKEHGAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
           DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152


>Glyma19g42890.2 
          Length = 152

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/152 (86%), Positives = 139/152 (91%)

Query: 1   MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLGSS+ V GTI F+QEG+GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHA 120
            HFNP   EHGAPED  RHAGDLGNV VGDDGT SFSITDSQIPLTGPNSIIGRAVVVHA
Sbjct: 61  AHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
           D DDLGKGGHELSKTTGNAGGRVACGIIGLQG
Sbjct: 121 DSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152


>Glyma19g42890.1 
          Length = 152

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/152 (86%), Positives = 139/152 (91%)

Query: 1   MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLGSS+ V GTI F+QEG+GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHA 120
            HFNP   EHGAPED  RHAGDLGNV VGDDGT SFSITDSQIPLTGPNSIIGRAVVVHA
Sbjct: 61  AHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
           D DDLGKGGHELSKTTGNAGGRVACGIIGLQG
Sbjct: 121 DSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152


>Glyma16g27020.2 
          Length = 160

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/150 (68%), Positives = 119/150 (79%)

Query: 2   VKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGP 61
           VK VA++   +N++G++ F Q  +G T+V+G ++GL  G HGFH+HA GDTTNGC STGP
Sbjct: 8   VKGVAIIIGDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTGP 67

Query: 62  HFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHAD 121
           HFNP  K+HGAP D  RHAGDLGN+  G DG    SI D QIPLTG +SIIGRAVVVHAD
Sbjct: 68  HFNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGRAVVVHAD 127

Query: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
           PDDLG+GGHELSKTTGNAG RVACGIIGLQ
Sbjct: 128 PDDLGRGGHELSKTTGNAGARVACGIIGLQ 157


>Glyma16g27020.1 
          Length = 167

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/157 (64%), Positives = 119/157 (75%), Gaps = 7/157 (4%)

Query: 2   VKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLST-- 59
           VK VA++   +N++G++ F Q  +G T+V+G ++GL  G HGFH+HA GDTTNGC ST  
Sbjct: 8   VKGVAIIIGDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTVL 67

Query: 60  -----GPHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGR 114
                GPHFNP  K+HGAP D  RHAGDLGN+  G DG    SI D QIPLTG +SIIGR
Sbjct: 68  TSSTPGPHFNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGR 127

Query: 115 AVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
           AVVVHADPDDLG+GGHELSKTTGNAG RVACGIIGLQ
Sbjct: 128 AVVVHADPDDLGRGGHELSKTTGNAGARVACGIIGLQ 164


>Glyma12g08650.1 
          Length = 204

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/148 (65%), Positives = 115/148 (77%)

Query: 3   KAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL  +  V+G  T  QE DGPT VS +I+GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 54  KAVAVLKGTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTTNGCISTGAH 113

Query: 63  FNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHADP 122
           FNP    HGAPED +RHAGDLGN+    +G    +I D+QIPL+GPNS++GRA+VVH   
Sbjct: 114 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELE 173

Query: 123 DDLGKGGHELSKTTGNAGGRVACGIIGL 150
           DDLGKGGHELS TTGNAGGR+ACG++GL
Sbjct: 174 DDLGKGGHELSLTTGNAGGRLACGVVGL 201


>Glyma11g19840.2 
          Length = 204

 Score =  201 bits (511), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/148 (65%), Positives = 114/148 (77%)

Query: 3   KAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL  +  V+G  T  QE DGPT VS  I+GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 54  KAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAH 113

Query: 63  FNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHADP 122
           FNP    HGAPED +RHAGDLGN+    +G    +I D+QIPL+GPNS++GRA+VVH   
Sbjct: 114 FNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELE 173

Query: 123 DDLGKGGHELSKTTGNAGGRVACGIIGL 150
           DDLGKGGHELS TTGNAGGR+ACG++GL
Sbjct: 174 DDLGKGGHELSLTTGNAGGRLACGVVGL 201


>Glyma11g19840.3 
          Length = 203

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 1/148 (0%)

Query: 3   KAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL  +  V+G  T  QE DGPT VS  I+GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 54  KAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAH 113

Query: 63  FNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHADP 122
           FNP    HGAPED +RHAGDLGN+    +G    +I D+QIPL+GPNS++GRA+VVH   
Sbjct: 114 FNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELE 173

Query: 123 DDLGKGGHELSKTTGNAGGRVACGIIGL 150
           DDLGKGGHELS TTGNAGGR+AC ++GL
Sbjct: 174 DDLGKGGHELSLTTGNAGGRLAC-VVGL 200


>Glyma11g19840.1 
          Length = 209

 Score =  193 bits (491), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 94/143 (65%), Positives = 109/143 (76%)

Query: 3   KAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL  +  V+G  T  QE DGPT VS  I+GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 54  KAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAH 113

Query: 63  FNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHADP 122
           FNP    HGAPED +RHAGDLGN+    +G    +I D+QIPL+GPNS++GRA+VVH   
Sbjct: 114 FNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELE 173

Query: 123 DDLGKGGHELSKTTGNAGGRVAC 145
           DDLGKGGHELS TTGNAGGR+AC
Sbjct: 174 DDLGKGGHELSLTTGNAGGRLAC 196


>Glyma12g30260.1 
          Length = 183

 Score =  190 bits (482), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 92/149 (61%), Positives = 113/149 (75%), Gaps = 1/149 (0%)

Query: 3   KAVAVLGSSDNVKGTITFSQEGD-GPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGP 61
           KAVA+L  + +V G +T +Q+ D GPT V+  +SGL PG HGFH+H  GD TNGC+STGP
Sbjct: 32  KAVAILKGNSSVHGLVTLTQQQDNGPTTVTVRVSGLTPGPHGFHLHEFGDITNGCISTGP 91

Query: 62  HFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHAD 121
           HFNP   +HGAPED IRHAGDLGN+    DG    +  D+QIPL GPNS++GRA+VVH  
Sbjct: 92  HFNPNKLKHGAPEDKIRHAGDLGNIVANADGVAEATTVDNQIPLIGPNSVVGRALVVHEL 151

Query: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGL 150
            DDLGKGG ELS +TGNAGGR+ACG++GL
Sbjct: 152 EDDLGKGGQELSLSTGNAGGRLACGVVGL 180


>Glyma19g42890.3 
          Length = 116

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 105/152 (69%), Gaps = 36/152 (23%)

Query: 1   MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLGSS+ V GTI F+QEG+GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHA 120
            HFNP   EHGAPED  RHAGDLGNV VGDD                             
Sbjct: 61  AHFNPNNNEHGAPEDENRHAGDLGNVNVGDD----------------------------- 91

Query: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
                  GGHELSKTTGNAGGRVACGIIGLQG
Sbjct: 92  -------GGHELSKTTGNAGGRVACGIIGLQG 116


>Glyma03g40280.2 
          Length = 109

 Score =  150 bits (378), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 83/97 (85%)

Query: 1  MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTG 60
          MVKAVAVLGSS+ V GTI F QEG GPT V+G+++GLKPGLHGFHVHALGDTTNGCLSTG
Sbjct: 1  MVKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTG 60

Query: 61 PHFNPAGKEHGAPEDAIRHAGDLGNVTVGDDGTTSFS 97
           HFNP  KEHGAPED  RHAGDLGNV VGDD ++ ++
Sbjct: 61 SHFNPNNKEHGAPEDENRHAGDLGNVNVGDDDSSHWT 97


>Glyma05g04170.1 
          Length = 304

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 13  NVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPHFNPAGKEHGA 72
           ++ G +  +Q       +    SGL PG HG+ ++  GD T G  STG  FNP  +E+  
Sbjct: 157 DIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNEENSK 216

Query: 73  PEDAIRHAGDLGNVTVGDDGTTSFSITDSQIPLTGPNSIIGRAVVVHADPD 123
                   GDLG +   + G   +S    ++ +     +IGR+VVV+A  D
Sbjct: 217 -----EPLGDLGTLEANEKGEAFYSGVKEKLRVA---DLIGRSVVVYATED 259