Miyakogusa Predicted Gene

Lj1g3v4955290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4955290.1 Non Chatacterized Hit- tr|I1JJ48|I1JJ48_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.07,0.0000001,coiled-coil,NULL,CUFF.33704.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45650.1                                                        61   6e-10
Glyma14g03160.1                                                        56   2e-08

>Glyma02g45650.1 
          Length = 313

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 11/89 (12%)

Query: 35  ESLEKQVQELKKVNSEKEMLMRDLQRKIWVLKMKEVQERDSRI------RDTIDYHKEKI 88
           ESLE+++  LKKV +E E+ +RDL+RKI VL+ KE++ER+ RI      RD ID  + +I
Sbjct: 132 ESLERELAGLKKVKAESEVRVRDLERKIGVLETKEIEERNKRIRFEEETRDKIDEKEREI 191

Query: 89  ILLRQGLEGFEKLEKVVAQ--SELEKMLK 115
              RQ +EG   LEKV A+  +EL++++K
Sbjct: 192 KGYRQKVEG---LEKVAAEKKTELDELVK 217


>Glyma14g03160.1 
          Length = 313

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 11/89 (12%)

Query: 35  ESLEKQVQELKKVNSEKEMLMRDLQRKIWVLKMKEVQERDSRI------RDTIDYHKEKI 88
           ESLE ++  LKKV +E ++ +RDL+RKI VL+ KE++ER+ RI      RD ID  + +I
Sbjct: 133 ESLENELAGLKKVKAESDVRVRDLERKIGVLETKEIEERNKRIRFEEETRDKIDEKEREI 192

Query: 89  ILLRQGLEGFEKLEKVVAQ--SELEKMLK 115
              RQ +   E+LEKV A+  +EL++++K
Sbjct: 193 KGYRQKV---EELEKVAAEKKTELDELVK 218