Miyakogusa Predicted Gene

Lj1g3v4954970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4954970.1 Non Chatacterized Hit- tr|C6TIQ3|C6TIQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54049
PE,46.67,0.0000000000008,seg,NULL,CUFF.33675.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g40040.1                                                        82   1e-16
Glyma19g42590.1                                                        73   5e-14

>Glyma03g40040.1 
          Length = 146

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 73/140 (52%), Gaps = 40/140 (28%)

Query: 11  NVGICYKLYHFIMKTLAAQAMKTVTLGHP------------SQYG--------------- 43
           N+GICY+LY+FIMKTLA+QAMKTVTLG              +Q G               
Sbjct: 7   NLGICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTEKMVLAETPC 66

Query: 44  --------SSSIDDDQALISN---APKKIVSINDKVEEIIXXXXXXXXXXXXXXXXLDQE 92
                   +++ID+   ++ +   APKK+VSIND VEEII                LDQ 
Sbjct: 67  EEKNIPCRNNNIDEKVLMVGDLPHAPKKMVSINDNVEEII-LPSKKRSKTFQESNSLDQ- 124

Query: 93  EEYPMPLRSILKSGSNLNDK 112
           +E+P PLRSILK G+ LN K
Sbjct: 125 QEHPKPLRSILKVGAKLNYK 144


>Glyma19g42590.1 
          Length = 112

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 11  NVGICYKLYHFIMKTLAAQAMKTVTLGHPSQYGSSSID---DDQALISNAPKKIVSINDK 67
           N+GICY+LYHFIM+TLA+QAMKTVTLG  S Y SSS       +   +NA K +      
Sbjct: 7   NLGICYRLYHFIMETLASQAMKTVTLGRSSHYDSSSTKVKITTRGFGANADKVVQPEIPC 66

Query: 68  VEEIIXXXXXXXXXXXXXXXXLDQEEEYPMPLRSILKSGSNLNDK 112
           VE+ I                L    +   PLRSILK G+NLNDK
Sbjct: 67  VEKNI-PCRNSIDEKVVVVGDLPHAPKKMKPLRSILKVGANLNDK 110