Miyakogusa Predicted Gene
- Lj1g3v4931730.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4931730.2 Non Chatacterized Hit- tr|I1HIT8|I1HIT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.46,1e-17,seg,NULL; UNCHARACTERIZED,NULL,CUFF.34042.2
(153 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g39850.1 249 8e-67
Glyma19g42410.1 245 1e-65
Glyma20g37720.1 230 5e-61
Glyma10g29590.1 221 2e-58
Glyma03g39850.2 178 1e-45
Glyma14g07110.1 86 1e-17
Glyma02g41860.1 84 4e-17
>Glyma03g39850.1
Length = 279
Score = 249 bits (636), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 1 MMSGKYTSIDNQQLQGSXXXXXXXXXXXXKFTDSNLKTFPPSETQGKITGGSRPPRDADD 60
MMSGKYTSID QQLQGS F DSNL+TFPPS QGKIT S PPRDADD
Sbjct: 1 MMSGKYTSIDAQQLQGSVPAVPDSRPATVNFADSNLQTFPPSGAQGKITAASGPPRDADD 60
Query: 61 SFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTATN 120
SFSKPVSGSDEPQQ GGW TFT+AAYKPYFD+D+SDVLERI DSLFPFRG+FNEKTATN
Sbjct: 61 SFSKPVSGSDEPQQ-GGWFQTFTIAAYKPYFDVDTSDVLERIIDSLFPFRGSFNEKTATN 119
Query: 121 PDLYGPFWICTTLIFVAASIGTFVTYLAHKLK 152
PDLYGPFWICTTLIFVAASIGTFVTY+AHKLK
Sbjct: 120 PDLYGPFWICTTLIFVAASIGTFVTYIAHKLK 151
>Glyma19g42410.1
Length = 279
Score = 245 bits (626), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 127/152 (83%), Gaps = 1/152 (0%)
Query: 1 MMSGKYTSIDNQQLQGSXXXXXXXXXXXXKFTDSNLKTFPPSETQGKITGGSRPPRDADD 60
MMSGKYTSID QQLQGS F DSNL+TFPPS GKIT S PPRDADD
Sbjct: 1 MMSGKYTSIDAQQLQGSVPAVPDSRPATVNFADSNLQTFPPSGPLGKITAASGPPRDADD 60
Query: 61 SFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTATN 120
SFSKPVSGSDEPQQ GGW TFT+AAYKPYFD+D+SDVLERI DSLFPFRG+FNEKTATN
Sbjct: 61 SFSKPVSGSDEPQQ-GGWFQTFTIAAYKPYFDVDTSDVLERIIDSLFPFRGSFNEKTATN 119
Query: 121 PDLYGPFWICTTLIFVAASIGTFVTYLAHKLK 152
PDLYGPFWICTTLIFVAASIGTFVTY+AHKLK
Sbjct: 120 PDLYGPFWICTTLIFVAASIGTFVTYVAHKLK 151
>Glyma20g37720.1
Length = 277
Score = 230 bits (586), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 127/153 (83%), Gaps = 3/153 (1%)
Query: 1 MMSGKYTSIDNQQLQGSXXXXXXXXXXXXKFTDSNLKTFPPSETQGKITGGSRPPRDADD 60
MMSG YTSIDNQ++ GS KF+DSNL+TFPPS QGKI+GGSRPPRD DD
Sbjct: 1 MMSGHYTSIDNQKVSGSVPAVEPPPF---KFSDSNLQTFPPSGAQGKISGGSRPPRDVDD 57
Query: 61 SFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTATN 120
+FSK SGSDEPQ+Q GW F++A+YKPYFD+D+ DVL+RIKDSL PF GTFNEKTA++
Sbjct: 58 TFSKSGSGSDEPQRQSGWFQAFSLASYKPYFDVDTIDVLDRIKDSLCPFSGTFNEKTASH 117
Query: 121 PDLYGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
PDLYGPFWICTTLIFVAASIGTFVTY+AHKLKD
Sbjct: 118 PDLYGPFWICTTLIFVAASIGTFVTYIAHKLKD 150
>Glyma10g29590.1
Length = 304
Score = 221 bits (563), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 125/177 (70%), Gaps = 24/177 (13%)
Query: 1 MMSGKYTSIDNQQLQGSX------------------------XXXXXXXXXXXKFTDSNL 36
MMSG YTSID+Q++ GS F SNL
Sbjct: 1 MMSGNYTSIDSQKVSGSVPTYKVDTVVGAYKIRLWVRIPLSDISNQTNNLCFFVFLYSNL 60
Query: 37 KTFPPSETQGKITGGSRPPRDADDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSS 96
+TFPPS QGKI GGSR PRD DD+FSKPVSGSDEPQQQ GW F++A+YKPYFD+D+
Sbjct: 61 QTFPPSGAQGKIGGGSRHPRDVDDTFSKPVSGSDEPQQQSGWFKAFSLASYKPYFDVDTI 120
Query: 97 DVLERIKDSLFPFRGTFNEKTATNPDLYGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
DVL+RIKDSL+PF GTFNEKTA++PDLYGPFWICTTLIFVAASIGTFVTY+AHKLKD
Sbjct: 121 DVLDRIKDSLYPFNGTFNEKTASHPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKD 177
>Glyma03g39850.2
Length = 225
Score = 178 bits (452), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 89/93 (95%), Gaps = 1/93 (1%)
Query: 60 DSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTAT 119
DSFSKPVSGSDEPQQ GGW TFT+AAYKPYFD+D+SDVLERI DSLFPFRG+FNEKTAT
Sbjct: 6 DSFSKPVSGSDEPQQ-GGWFQTFTIAAYKPYFDVDTSDVLERIIDSLFPFRGSFNEKTAT 64
Query: 120 NPDLYGPFWICTTLIFVAASIGTFVTYLAHKLK 152
NPDLYGPFWICTTLIFVAASIGTFVTY+AHKLK
Sbjct: 65 NPDLYGPFWICTTLIFVAASIGTFVTYIAHKLK 97
>Glyma14g07110.1
Length = 270
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 1 MMSGKYTSIDNQQLQGSXXXXXXXXXXXXKF--TDSNLKTFPPSETQGKITGGSRPPRDA 58
M YT + L GS K T +N++ FPP+ GG R P
Sbjct: 1 MEESSYTGLPTSHLLGSVPAVVTEENNASKHVATSANMQIFPPNN------GGDRGP--G 52
Query: 59 DDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTA 118
++ P + + E Q W F++++Y YF++D+ VL R+ SL P G F K
Sbjct: 53 YNTLGSP-TEAFEQQPANNWRGVFSISSYSEYFNVDTDVVLIRLISSLNPVAGDFFSKID 111
Query: 119 TNPDLYGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
NPDLYG WI TTL+FV AS+G T+L K D
Sbjct: 112 ANPDLYGLIWISTTLVFVLASLGNLATFLMQKHVD 146
>Glyma02g41860.1
Length = 270
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 1 MMSGKYTSIDNQQLQGSXXXXXXXXXXXXKF--TDSNLKTFPPSETQGKITGGSRPPRDA 58
M YT + L GS K T +N++TFPP+ GG R P
Sbjct: 1 MEESSYTGLPTSHLLGSVPAVITEENNATKHVATGANMQTFPPNN------GGDRGP--G 52
Query: 59 DDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTA 118
+ P + + E Q W F++++Y YF++D+ VL R+ SL P F K
Sbjct: 53 HQTLGSP-TEAFEQQPANNWRGIFSMSSYSEYFNVDTDVVLIRLISSLNPVAADFFSKID 111
Query: 119 TNPDLYGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
NPDLYG WI TTL+FV AS+G T+L K D
Sbjct: 112 ANPDLYGLIWISTTLVFVLASLGNLATFLMQKHAD 146