Miyakogusa Predicted Gene
- Lj1g3v4931460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4931460.1 Non Chatacterized Hit- tr|I3SCH1|I3SCH1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,70.49,1e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.33637.1
(183 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g03290.1 103 1e-22
Glyma07g15490.1 84 1e-16
Glyma01g02160.1 73 2e-13
Glyma01g11130.1 66 2e-11
Glyma09g33780.1 64 6e-11
Glyma04g19880.1 55 6e-08
Glyma13g01580.1 53 2e-07
Glyma02g07090.1 53 2e-07
Glyma17g07700.1 52 4e-07
Glyma16g26080.1 51 6e-07
Glyma10g35650.1 49 3e-06
>Glyma08g03290.1
Length = 285
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%)
Query: 99 PGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYITANQFFNSRIT 157
PGRGY+E RL GFS+WLRNHVTGS SW +IR CLA SDVC KLTQDYITA+QFFNS I+
Sbjct: 121 PGRGYKEYRLHGFSSWLRNHVTGSGSWQKIRPCLAASDVCSKLTQDYITADQFFNSHIS 179
>Glyma07g15490.1
Length = 273
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 99 PGRGYRESRLDGFSAWLRNHV---TGSRSWNRIRTCLADSDVCIKLTQDYITANQFFNS 154
PGRG++ES L GFS WLRNHV + + SWN+I TCLA S VCIKLTQDY +A+ FFNS
Sbjct: 105 PGRGFKESMLVGFSPWLRNHVFTASSTTSWNKITTCLAHSYVCIKLTQDYASADHFFNS 163
>Glyma01g02160.1
Length = 166
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 1 MGVSNNITAVVNFIALMASIPIIASGV--------SCVASLQARQRVXXXXXXXXXXXXX 52
M +SNN+ +NF+A++ SIPII +G+ SCV LQ +
Sbjct: 1 MAMSNNVIGCINFVAVILSIPIIGAGIWLTNGDADSCVQFLQWPVIILGVLILVVALAGF 60
Query: 53 XXXXX-XNWLRRXXXXXXXXXXXXXXXXXXXXXRLCIYSYSTRWKLFPGRGYRESRLDGF 111
+WL + + + + P R Y E R+D F
Sbjct: 61 IGAFFRVSWLLIVYLVAMLVLVILLVSLVAFVYMVTLRGHG---NIEPNRAYLEYRMDDF 117
Query: 112 SAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYITANQFFNSRIT 157
S +LR V S W+RIR+CL+ +++C +L Q Y A FFN+R+T
Sbjct: 118 SGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQSYRMAQDFFNARLT 163
>Glyma01g11130.1
Length = 269
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 94 RWKLFPGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYITANQFFN 153
R + P R Y E R+D FS WLR V S W+ IR+CL S++C L Q Y TA +FFN
Sbjct: 100 RGNIEPNRSYLEYRMDDFSIWLRRRVRSSSKWDGIRSCLRSSNICADLDQQYRTAQEFFN 159
Query: 154 SRIT 157
+ +T
Sbjct: 160 AHLT 163
>Glyma09g33780.1
Length = 269
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 99 PGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYITANQFFNSRIT 157
P R Y E R+D FS +LR V S W+RIR+CL+ +++C +L Q Y A FFN+R+T
Sbjct: 105 PNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQGYRMAQDFFNARLT 163
>Glyma04g19880.1
Length = 267
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 96 KLFPGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYI--TANQFFN 153
++ RGYRE RL +S WL+N VT +WNRI++CL + +C K + +A QF+
Sbjct: 104 EVVSNRGYREYRLGDYSNWLQNRVTNPHTWNRIKSCLQSAKLCDKFETQFANDSAQQFYA 163
Query: 154 SRIT 157
++
Sbjct: 164 ENLS 167
>Glyma13g01580.1
Length = 296
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 96 KLFPGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYI--TANQFFN 153
++ RGY+E RL +S WL+ V +++WNRIR+CL VC + ++ T +F++
Sbjct: 129 EVVSNRGYKEYRLGDYSNWLQKRVNNTKTWNRIRSCLQSGKVCTEFQSKFLNDTVTEFYS 188
Query: 154 SRIT 157
++
Sbjct: 189 ENLS 192
>Glyma02g07090.1
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 99 PGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKL 141
PGR Y+E RLD +S WLRN + + W+ IR+C+ S+ C KL
Sbjct: 105 PGRAYKEYRLDRYSPWLRNRIKDPQYWSTIRSCILGSNTCAKL 147
>Glyma17g07700.1
Length = 270
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 101 RGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKLTQDYI--TANQFFNSRIT 157
RGY+E RL +S WL+ V +++WNRI +CL VC + ++ T QF+ ++
Sbjct: 108 RGYKEYRLGDYSNWLQKKVNNTKTWNRISSCLHSGKVCTEFQSKFLNDTVTQFYTEHLS 166
>Glyma16g26080.1
Length = 283
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 99 PGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKL 141
PGR Y+E RL+ +S WLRN + + W+ IR+C+ S+ C KL
Sbjct: 105 PGRAYKEYRLERYSPWLRNRIQDPQYWSTIRSCILGSNTCAKL 147
>Glyma10g35650.1
Length = 283
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 99 PGRGYRESRLDGFSAWLRNHVTGSRSWNRIRTCLADSDVCIKL 141
PGR Y+E RL +S WLR + R WN IR C+ S C KL
Sbjct: 105 PGRVYKEYRLQDYSPWLRKRIQDPRYWNTIRGCILGSKTCEKL 147