Miyakogusa Predicted Gene

Lj1g3v4931160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4931160.1 Non Chatacterized Hit- tr|I3T2E9|I3T2E9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,90.91,0.000000000000001,DUF543,Protein of unknown function
DUF543; seg,NULL,CUFF.33631.1
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g48350.2                                                        68   2e-12
Glyma06g48350.1                                                        68   2e-12

>Glyma06g48350.2 
          Length = 93

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 37/44 (84%)

Query: 1  MADNKEIIPPQYGLDAKWDACLDLTVCRFVFSSFVGALGGLLFF 44
          MA+ KE+IP Q+ +DAKWDAC+DLTV RFV+S+  GA GGLLFF
Sbjct: 1  MAEKKEMIPQQFDIDAKWDACIDLTVRRFVYSATAGAFGGLLFF 44


>Glyma06g48350.1 
          Length = 94

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 37/44 (84%)

Query: 1  MADNKEIIPPQYGLDAKWDACLDLTVCRFVFSSFVGALGGLLFF 44
          MA+ KE+IP Q+ +DAKWDAC+DLTV RFV+S+  GA GGLLFF
Sbjct: 1  MAEKKEMIPQQFDIDAKWDACIDLTVRRFVYSATAGAFGGLLFF 44