Miyakogusa Predicted Gene
- Lj1g3v4897990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4897990.1 Non Chatacterized Hit- tr|J3LXM1|J3LXM1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,69.44,3e-19,2FE2S_FER_2,2Fe-2S ferredoxin-type domain;
fdx_plant: ferredoxin [2Fe-2S],Ferredoxin [2Fe-2S], plant,CUFF.33575.1
(152 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g24500.1 224 2e-59
Glyma10g42540.2 216 6e-57
Glyma10g42540.1 216 6e-57
Glyma11g18980.1 169 7e-43
Glyma12g09500.2 168 2e-42
Glyma12g09500.1 168 2e-42
Glyma12g29100.1 122 1e-28
Glyma12g29090.1 121 3e-28
Glyma12g29110.1 121 3e-28
Glyma05g30200.1 120 6e-28
Glyma08g13360.1 113 7e-26
Glyma08g20110.1 101 3e-22
Glyma05g23690.1 72 2e-13
Glyma17g16610.1 70 8e-13
Glyma05g23690.2 70 1e-12
Glyma01g44850.1 69 1e-12
Glyma05g23690.3 69 2e-12
Glyma11g00800.1 68 3e-12
>Glyma20g24500.1
Length = 154
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/149 (73%), Positives = 119/149 (79%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+S MRLP A L GT RRSCA TKS SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 5 NMSTMRLPRASLSGTTPARRSCALTKSPSSLRSVKNVSKVFGLKSSSFRVSAMAVYKVKL 64
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EFEAPDD+YILD+AENAGV+LPYSCRAGACSTCAGQ+VSG
Sbjct: 65 IGPDGEENEFEAPDDTYILDSAENAGVELPYSCRAGACSTCAGQVVSGSVDQADQSFLDD 124
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+EKGYLLTCVSYPKSDCVI+THKEE+L
Sbjct: 125 HQIEKGYLLTCVSYPKSDCVIHTHKEEDL 153
>Glyma10g42540.2
Length = 154
Score = 216 bits (551), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/149 (71%), Positives = 117/149 (78%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+S +RLP A L GT RRSCA K+ SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 5 NMSTVRLPRASLSGTTPARRSCALIKNPSSLRSVKNVSKVFGLKSSSFRVSAMAVYKVKL 64
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EFEAPDD+YILDAAENAGV+LPYSCRAGACSTCAG +VSG
Sbjct: 65 IGPDGEENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGHVVSGSVDQADQSFLDD 124
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
++KGYLLTCVSYPKSDCVI+THKEE+L
Sbjct: 125 HQIKKGYLLTCVSYPKSDCVIHTHKEEDL 153
>Glyma10g42540.1
Length = 154
Score = 216 bits (551), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/149 (71%), Positives = 117/149 (78%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+S +RLP A L GT RRSCA K+ SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 5 NMSTVRLPRASLSGTTPARRSCALIKNPSSLRSVKNVSKVFGLKSSSFRVSAMAVYKVKL 64
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EFEAPDD+YILDAAENAGV+LPYSCRAGACSTCAG +VSG
Sbjct: 65 IGPDGEENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGHVVSGSVDQADQSFLDD 124
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
++KGYLLTCVSYPKSDCVI+THKEE+L
Sbjct: 125 HQIKKGYLLTCVSYPKSDCVIHTHKEEDL 153
>Glyma11g18980.1
Length = 155
Score = 169 bits (429), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 114/155 (73%), Gaps = 3/155 (1%)
Query: 1 MSTISAMRLPTAPLPGTAHTRRSCAFT--KSASSLGSVKNVSKAFALKSSS-FRVCAMAA 57
M+T+S +++ + TA S T K SS GSVK++S++F LKSSS FRV AMA+
Sbjct: 1 MATLSTVKVSPHCMFQTASKNPSTVATTMKCPSSFGSVKSISRSFGLKSSSSFRVTAMAS 60
Query: 58 YKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXX 117
YKVKLIGPDG E+EFEA DD+YILDAAE+AGV+LPYSCRAGACSTCAG++V+G
Sbjct: 61 YKVKLIGPDGTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120
Query: 118 XXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+++G++LTCVSYP +DCVI THKE +LY
Sbjct: 121 SFLDDNQLKEGFVLTCVSYPTADCVIETHKEGDLY 155
>Glyma12g09500.2
Length = 151
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 26 FTKSASSLGSVKNVSKAFALKS-SSFRVCAMAAYKVKLIGPDGAESEFEAPDDSYILDAA 84
K SSL SVK+VS++F LKS SSFRV AMA+YKVKLIGPDG E+EFEA DD+YILDAA
Sbjct: 24 IVKCPSSLRSVKSVSRSFGLKSASSFRVTAMASYKVKLIGPDGTENEFEATDDTYILDAA 83
Query: 85 ENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXXXVEKGYLLTCVSYPKSDCVIY 144
E+AGV+LPYSCRAGACSTCAG++VSG +++G++LTCVSYP +DCVI
Sbjct: 84 ESAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADCVIE 143
Query: 145 THKEEELY 152
THKE +LY
Sbjct: 144 THKEGDLY 151
>Glyma12g09500.1
Length = 151
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 26 FTKSASSLGSVKNVSKAFALKS-SSFRVCAMAAYKVKLIGPDGAESEFEAPDDSYILDAA 84
K SSL SVK+VS++F LKS SSFRV AMA+YKVKLIGPDG E+EFEA DD+YILDAA
Sbjct: 24 IVKCPSSLRSVKSVSRSFGLKSASSFRVTAMASYKVKLIGPDGTENEFEATDDTYILDAA 83
Query: 85 ENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXXXVEKGYLLTCVSYPKSDCVIY 144
E+AGV+LPYSCRAGACSTCAG++VSG +++G++LTCVSYP +DCVI
Sbjct: 84 ESAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADCVIE 143
Query: 145 THKEEELY 152
THKE +LY
Sbjct: 144 THKEGDLY 151
>Glyma12g29100.1
Length = 147
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Query: 36 VKNVSKAFALKSS-SFRVCAMAAYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYS 94
+K + F LK RV AMA+Y VKLI P+G E EFE PDD +IL+ AE G+DLPYS
Sbjct: 31 LKANAGVFGLKGGRGGRVSAMASYNVKLITPEG-EQEFECPDDVFILEKAEEFGIDLPYS 89
Query: 95 CRAGACSTCAGQLVSGXXXXXXXXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
C+AGACS+CAG++VSG + G++LTCV+YP SD VI TH+E+EL+
Sbjct: 90 CKAGACSSCAGKVVSGKVDQSDGSYLDDTQIGNGFVLTCVAYPTSDVVIQTHQEDELF 147
>Glyma12g29090.1
Length = 145
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 54 AMAAYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXX 113
AMA YKVKLI P+G E EFE PDD YILD AE G+DLPYSCRAG+CS CA ++VSG
Sbjct: 47 AMATYKVKLITPEG-EQEFECPDDIYILDQAEENGIDLPYSCRAGSCSACAAKVVSGKLD 105
Query: 114 XXXXXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
++ G++LTCV+YP SD VI TH+EEEL
Sbjct: 106 QSDGSFLDDDQIDAGFVLTCVAYPTSDIVIETHREEEL 143
>Glyma12g29110.1
Length = 147
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 54 AMAAYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXX 113
AMA++KVKLI P+G E EFE PDD YILD AE G++LPYSCRAG+CS CAG++VSG
Sbjct: 48 AMASFKVKLITPEG-EKEFECPDDVYILDQAEEEGLELPYSCRAGSCSVCAGKVVSGKVD 106
Query: 114 XXXXXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+E G+ LTCV+YP SD VI THKEE+L
Sbjct: 107 NSDATFLEDEQLEAGFTLTCVAYPTSDVVIETHKEEDL 144
>Glyma05g30200.1
Length = 147
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 9/153 (5%)
Query: 1 MSTISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKA-FALKSS-SFRVCAMAAY 58
M+T +A+ + + T+ RR T +SL + NV +A F LKS RV MA+Y
Sbjct: 1 MATTAAL---SGTMVSTSFMRRQPMTT---TSLKTFPNVGEALFGLKSGRGGRVTCMASY 54
Query: 59 KVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXX 118
KVKLI P+G E EFE PDD +I+D AE+ G++LPYSCRAG+C +C G++V G
Sbjct: 55 KVKLITPEG-EVEFECPDDVFIVDKAEDEGIELPYSCRAGSCVSCVGKIVEGNVDQSDGS 113
Query: 119 XXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
++ G++LTCV+ P+SD VI THKE E+
Sbjct: 114 FLDDEQIDSGWVLTCVAQPRSDVVIETHKEGEI 146
>Glyma08g13360.1
Length = 144
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 89/152 (58%), Gaps = 10/152 (6%)
Query: 1 MSTISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSS-SFRVCAMAAYK 59
M+T +A+ + + T+ R+ TKS + + F LK RV MA+YK
Sbjct: 1 MATTAAL---SGTMVSTSFMRKQPMTTKSLKTFPNA-----LFGLKGGRGGRVTCMASYK 52
Query: 60 VKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXX 119
VKLI P+G E EFE PDD +I+D AE G++LPYSCRAG+C +C G++V G
Sbjct: 53 VKLITPEG-EVEFECPDDVFIVDKAEEEGIELPYSCRAGSCVSCVGKIVKGDVDQSDGSF 111
Query: 120 XXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+E G++LTCV+ P+SD VI THK+ E+
Sbjct: 112 LDDEQIESGWVLTCVALPRSDVVIETHKDGEI 143
>Glyma08g20110.1
Length = 100
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 51 RVCAMAAYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSG 110
RV AMA+YKVKLI P+G E EFE PDD ILD AE G++LPYSCRAG+CS CAG++
Sbjct: 4 RVTAMASYKVKLITPEG-EQEFECPDDVCILDQAEEKGLELPYSCRAGSCSVCAGKV--- 59
Query: 111 XXXXXXXXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+ G++LT V+YP SD V+ TH EEEL
Sbjct: 60 --EQSDGNFLDDDQIVAGFVLTRVAYPTSDVVVETHWEEEL 98
>Glyma05g23690.1
Length = 179
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 7 MRLPTAPLPGT-----AHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVK 61
+R+P PL ++TRR T + + LG+ + +S S V +KV
Sbjct: 6 LRIPGMPLTNQHQSFPSNTRRKA--TTAKAELGTAVARTGGAGYQSPSVDV---PTHKVT 60
Query: 62 LIGPD-GAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXX 120
+ G EF P+D YIL AE + LP++CR G C++CA ++ G
Sbjct: 61 VHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQPEALGI 120
Query: 121 XXXXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+KGY L CV +P SD + T E+E+Y
Sbjct: 121 SAELRDKGYALLCVGFPTSDVEVETQDEDEVY 152
>Glyma17g16610.1
Length = 179
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 67 GAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXXXVE 126
G EF P+D YIL AE + LP++CR G C++CA ++ +G +
Sbjct: 67 GIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKNGKIRQPEALGISAELRD 126
Query: 127 KGYLLTCVSYPKSDCVIYTHKEEELY 152
KGY L CV +P SD + T E+E+Y
Sbjct: 127 KGYALLCVGFPTSDVEVETQDEDEVY 152
>Glyma05g23690.2
Length = 159
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 7 MRLPTAPLPGT-----AHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVK 61
+R+P PL ++TRR T + + LG+ + +S S V +KV
Sbjct: 6 LRIPGMPLTNQHQSFPSNTRRKA--TTAKAELGTAVARTGGAGYQSPSVDV---PTHKVT 60
Query: 62 LIGPD-GAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXX 120
+ G EF P+D YIL AE + LP++CR G C++CA ++ G
Sbjct: 61 VHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQPEALGI 120
Query: 121 XXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+KGY L CV +P SD + T E+E+
Sbjct: 121 SAELRDKGYALLCVGFPTSDVEVETQDEDEV 151
>Glyma01g44850.1
Length = 147
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 4 ISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKLI 63
+++++L T P R+ KS +S + + RV ++ +YKV +I
Sbjct: 1 MASLQLTTTPFTLLRQQRQHPTKKKSTAS--------QLNPPRPRPLRV-SVRSYKV-VI 50
Query: 64 GPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXX 123
DG +E E D IL A ++G+ +P+ C+ G C TC +L+SG
Sbjct: 51 EHDGESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISG-SVDQSDGMLSDD 109
Query: 124 XVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
VE+GY L C +YP+SDC I E+EL
Sbjct: 110 VVERGYALLCAAYPQSDCHIKIIPEDEL 137
>Glyma05g23690.3
Length = 156
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 7 MRLPTAPLPGT-----AHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVK 61
+R+P PL ++TRR T + + LG+ + +S S V +KV
Sbjct: 6 LRIPGMPLTNQHQSFPSNTRRKA--TTAKAELGTAVARTGGAGYQSPSVDV---PTHKVT 60
Query: 62 LIGPD-GAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXX 120
+ G EF P+D YIL AE + LP++CR G C++CA ++ G
Sbjct: 61 VHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQPEALGI 120
Query: 121 XXXXVEKGYLLTCVSYPKSDCVIYTHKEEE 150
+KGY L CV +P SD + T E+E
Sbjct: 121 SAELRDKGYALLCVGFPTSDVEVETQDEDE 150
>Glyma11g00800.1
Length = 103
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 57 AYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXX 116
+YKV +I DG +E E D IL A ++G+ +P+ C+ G C TC +L+SG
Sbjct: 1 SYKV-VIEHDGESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISG-SVDQS 58
Query: 117 XXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
VE+GY L C +YP+SDC I EEEL
Sbjct: 59 DGMLSDDVVERGYALLCAAYPQSDCHIKIIPEEEL 93