Miyakogusa Predicted Gene
- Lj1g3v4865390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4865390.1 tr|I3SJE5|I3SJE5_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,100,0,coiled-coil,NULL; seg,NULL;
Ribosomal protein L19 (L19e),Ribosomal protein L19/L19e; 60S RIBOSOMAL
P,CUFF.33513.1
(212 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g02060.1 338 2e-93
Glyma10g02050.1 338 2e-93
Glyma02g01950.1 337 4e-93
Glyma19g40080.1 336 9e-93
Glyma03g37460.1 336 1e-92
Glyma19g40080.2 335 1e-92
Glyma19g39570.1 335 2e-92
Glyma03g36920.1 333 1e-91
Glyma02g01940.1 332 1e-91
Glyma19g39570.3 323 6e-89
Glyma01g33730.1 290 6e-79
Glyma19g39570.2 242 2e-64
Glyma19g40080.3 205 2e-53
Glyma14g13350.1 80 1e-15
>Glyma10g02060.1
Length = 212
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/188 (89%), Positives = 173/188 (92%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERKNARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
Query: 181 LAQGPGDK 188
LAQGPG++
Sbjct: 181 LAQGPGER 188
>Glyma10g02050.1
Length = 212
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/188 (89%), Positives = 173/188 (92%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRE+KKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERKNARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
Query: 181 LAQGPGDK 188
LAQGPG+K
Sbjct: 181 LAQGPGEK 188
>Glyma02g01950.1
Length = 212
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 168/188 (89%), Positives = 173/188 (92%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERKNARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
Query: 181 LAQGPGDK 188
LAQGPG++
Sbjct: 181 LAQGPGER 188
>Glyma19g40080.1
Length = 212
Score = 336 bits (862), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/188 (89%), Positives = 172/188 (91%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
Query: 181 LAQGPGDK 188
LAQGPG+K
Sbjct: 181 LAQGPGEK 188
>Glyma03g37460.1
Length = 212
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/188 (89%), Positives = 172/188 (91%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
Query: 181 LAQGPGDK 188
LAQGPG+K
Sbjct: 181 LAQGPGEK 188
>Glyma19g40080.2
Length = 205
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/188 (89%), Positives = 172/188 (91%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
Query: 181 LAQGPGDK 188
LAQGPG+K
Sbjct: 181 LAQGPGEK 188
>Glyma19g39570.1
Length = 212
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/212 (81%), Positives = 176/212 (83%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRL++SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
Query: 181 LAQGPGDKXXXXXXXXXXXXXXXXXXXKKSKK 212
LAQGP DK KKSKK
Sbjct: 181 LAQGPVDKSFTAPSAPAATVPQSAQAPKKSKK 212
>Glyma03g36920.1
Length = 212
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/188 (89%), Positives = 171/188 (90%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAK+KGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKKKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREER 180
Query: 181 LAQGPGDK 188
LAQGP DK
Sbjct: 181 LAQGPIDK 188
>Glyma02g01940.1
Length = 253
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 171/188 (90%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANSR NIRKLVKDGFIIRKPTKIHSR
Sbjct: 42 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRLNIRKLVKDGFIIRKPTKIHSR 101
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRE+KKIDKHMY
Sbjct: 102 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 161
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 162 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 221
Query: 181 LAQGPGDK 188
LAQGPG+K
Sbjct: 222 LAQGPGEK 229
>Glyma19g39570.3
Length = 187
Score = 323 bits (829), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 164/183 (89%), Positives = 167/183 (91%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRL++SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
Query: 181 LAQ 183
LAQ
Sbjct: 181 LAQ 183
>Glyma01g33730.1
Length = 202
Score = 290 bits (743), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 157/188 (83%), Gaps = 10/188 (5%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRLA+SVLKCGRGKVWLDPNE NEISMANS QNIRKLV+DGFIIRKPTKIHS
Sbjct: 1 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSLQNIRKLVEDGFIIRKPTKIHSC 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
RARRMKEAK+KGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 LRARRMKEAKKKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
HDM MKVKGN SIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARR+ER
Sbjct: 121 HDMCMKVKGN----------SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARRKER 170
Query: 181 LAQGPGDK 188
LAQGP DK
Sbjct: 171 LAQGPVDK 178
>Glyma19g39570.2
Length = 165
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/136 (87%), Positives = 121/136 (88%)
Query: 1 MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
MVSLKLQKRL++SVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMY
Sbjct: 61 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
Query: 121 HDMYMKVKGNVFKNKR 136
HDMYMKVKGNVFKNKR
Sbjct: 121 HDMYMKVKGNVFKNKR 136
>Glyma19g40080.3
Length = 147
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 108/123 (87%)
Query: 66 MKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYM 125
MKEAKRKGRHSGYGKRKGTREARLPTKI KYRESKKIDKHMYHDMYM
Sbjct: 1 MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYM 60
Query: 126 KVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREERLAQGP 185
KVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK ARREERLAQGP
Sbjct: 61 KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGP 120
Query: 186 GDK 188
G+K
Sbjct: 121 GEK 123
>Glyma14g13350.1
Length = 54
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 127 VKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNA 175
+KGN+FKNKRVL+ESIHK KAEKAREKTL DQFEAK KNKASRE++N
Sbjct: 1 IKGNIFKNKRVLVESIHKAKAEKAREKTLPDQFEAKSTKNKASREKENC 49