Miyakogusa Predicted Gene
- Lj1g3v4863140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4863140.1 tr|A9SS49|A9SS49_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233966,32.38,5e-19,seg,NULL; Di19,Drought induced 19/
RING finger protein 114; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAM,CUFF.33487.1
(231 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g40150.1 293 1e-79
Glyma03g37530.1 285 4e-77
Glyma03g37530.2 232 2e-61
Glyma20g38290.1 157 6e-39
Glyma10g29030.1 154 7e-38
Glyma15g15560.2 134 9e-32
Glyma15g15560.1 134 9e-32
Glyma09g04490.1 129 2e-30
Glyma10g29030.2 100 2e-21
Glyma20g23800.1 83 2e-16
Glyma07g32120.1 75 5e-14
Glyma13g24420.1 72 5e-13
Glyma16g17710.1 62 6e-10
>Glyma19g40150.1
Length = 216
Score = 293 bits (749), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/229 (66%), Positives = 173/229 (75%), Gaps = 13/229 (5%)
Query: 3 MEGEDLSFGLSTASRTHRSRLKSHXXXXXXXXXXXXXXXXXXXXXXLRTAYPCPFCEEDF 62
ME E LS GLSTASR+++SRLKSH LRTAYPCPFC EDF
Sbjct: 1 MEDETLSLGLSTASRSYQSRLKSHFELFIDFDEVNGDEE-------LRTAYPCPFCTEDF 53
Query: 63 DLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDS 122
DLLELCCHIDLDH +EAKSG+ CPVC +WIG NMV+HIAAQHGN+FKSQLKSK ++ +S
Sbjct: 54 DLLELCCHIDLDHPVEAKSGI--CPVCTMWIGTNMVDHIAAQHGNLFKSQLKSKCYKDES 111
Query: 123 YPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSE 182
YP LSFSRK E HW+SF G S + STS+ A DP LSFLCGA+A E +NVQPDSS E
Sbjct: 112 YPALSFSRKGE---HWQSFSTGLSAM-STSKAASDPWLSFLCGASAVDERKNVQPDSSRE 167
Query: 183 LSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFLDPDL 231
+SIEE HS+D VL RDV+PSL DKD+IEKA+RSKFVQGLLMST LDPD
Sbjct: 168 VSIEELHSNDKVLVRDVQPSLSDKDQIEKAQRSKFVQGLLMSTILDPDF 216
>Glyma03g37530.1
Length = 218
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/229 (64%), Positives = 168/229 (73%), Gaps = 11/229 (4%)
Query: 3 MEGEDLSFGLSTASRTHRSRLKSHXXXXXXXXXXXXXXXXXXXXXXLRTAYPCPFCEEDF 62
ME E LSF LST SR+++SRLKSH LRTAYPCPFC E+F
Sbjct: 1 MEDETLSFVLSTPSRSYQSRLKSHFELFIDLDEVNGDEE-------LRTAYPCPFCAENF 53
Query: 63 DLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDS 122
DLLELCCH+DLDH IEAKSG+ CPVC +WIG NMV HIAAQHGN+ KS LKSK ++ +
Sbjct: 54 DLLELCCHVDLDHPIEAKSGI--CPVCTLWIGTNMVHHIAAQHGNLLKSHLKSKCYKDEP 111
Query: 123 YPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSE 182
YP LSFS K E D HW+SF G SP +TS+ A DP LSFLCG +A E +NVQPDSSSE
Sbjct: 112 YPALSFSSKGERDGHWQSFSTGLSP--TTSKAASDPWLSFLCGPSAVDECENVQPDSSSE 169
Query: 183 LSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFLDPDL 231
+SIEE HS+D VLERDV+PSL DKD+IEKA+ SKFVQGLLMST LDPD
Sbjct: 170 VSIEEIHSNDNVLERDVQPSLSDKDQIEKAQHSKFVQGLLMSTILDPDF 218
>Glyma03g37530.2
Length = 209
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 141/201 (70%), Gaps = 11/201 (5%)
Query: 3 MEGEDLSFGLSTASRTHRSRLKSHXXXXXXXXXXXXXXXXXXXXXXLRTAYPCPFCEEDF 62
ME E LSF LST SR+++SRLKSH LRTAYPCPFC E+F
Sbjct: 1 MEDETLSFVLSTPSRSYQSRLKSHFELFIDLDEVNGDEE-------LRTAYPCPFCAENF 53
Query: 63 DLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDS 122
DLLELCCH+DLDH IEAKSG+ CPVC +WIG NMV HIAAQHGN+ KS LKSK ++ +
Sbjct: 54 DLLELCCHVDLDHPIEAKSGI--CPVCTLWIGTNMVHHIAAQHGNLLKSHLKSKCYKDEP 111
Query: 123 YPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSE 182
YP LSFS K E D HW+SF G SP +TS+ A DP LSFLCG +A E +NVQPDSSSE
Sbjct: 112 YPALSFSSKGERDGHWQSFSTGLSP--TTSKAASDPWLSFLCGPSAVDECENVQPDSSSE 169
Query: 183 LSIEETHSDDTVLERDVEPSL 203
+SIEE HS+D VLER E SL
Sbjct: 170 VSIEEIHSNDNVLERYDEVSL 190
>Glyma20g38290.1
Length = 219
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 118/184 (64%), Gaps = 6/184 (3%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
+R + CPFC E FD++ LCCHID +H +EA++GV CPVCA+ +G +MV HI QHG+I
Sbjct: 41 IREEFLCPFCSEYFDIVGLCCHIDEEHPMEARNGV--CPVCALRVGVDMVAHITLQHGSI 98
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA 168
FK Q K K + SY TLS RK+ + + +S + GSS + S+S DPLLS
Sbjct: 99 FKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNA--DPLLSSFI-LPL 155
Query: 169 AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPS-LPDKDRIEKARRSKFVQGLLMSTFL 227
A EH + QP +E + SD+TV R+VE S L KD+ EKA+R +FVQGLL+ST L
Sbjct: 156 ANEHASSQPHLHTETRSSKKCSDETVSTRNVETSTLSVKDKEEKAKRCEFVQGLLLSTIL 215
Query: 228 DPDL 231
D +L
Sbjct: 216 DDNL 219
>Glyma10g29030.1
Length = 219
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
+R + CPFC E FD++ LCCHID +H +EAK+GV CPVCA+ +G +MV HI QHG+I
Sbjct: 41 IREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGV--CPVCALRVGVDMVAHITLQHGSI 98
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA 168
FK Q K K + SY TLS RK+ + + +S + GSS + S+S DPLLS
Sbjct: 99 FKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNA--DPLLSSFI-LPL 155
Query: 169 AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPS-LPDKDRIEKARRSKFVQGLLMSTFL 227
A EH + QP +E + D+TV R+VE S L KD+ EK +R +FVQGLL+ST L
Sbjct: 156 ANEHASSQPHLHTETRSSKKCLDETVSTRNVETSTLSVKDKEEKEKRCEFVQGLLLSTIL 215
Query: 228 DPDL 231
D +L
Sbjct: 216 DDNL 219
>Glyma15g15560.2
Length = 215
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
R + CPFC ED+D++ LCCHID H I+AK+GV CP+C +G ++V H QHGN
Sbjct: 35 FRAEFLCPFCAEDYDVVSLCCHIDDHHPIQAKNGV--CPICGKKVGVDLVGHFTTQHGNF 92
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLS-FLCGAA 167
+ Q K + + S T+S RK+ ++ +S GSS + S S + DPLLS F+
Sbjct: 93 LRVQRKRRVRKGGSASTISILRKELQEGALQSLLGGSSYLAS-SNSEPDPLLSSFMFNPV 151
Query: 168 AAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
A E + P S+ + ++E+ DD + + + L ++D++EKARR +FVQGLLMST L
Sbjct: 152 VADESVSATPPSTEDALVKESSKDDFLKRKPQQLQLSEEDQVEKARRFEFVQGLLMSTIL 211
Query: 228 DPDL 231
D L
Sbjct: 212 DDKL 215
>Glyma15g15560.1
Length = 215
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
R + CPFC ED+D++ LCCHID H I+AK+GV CP+C +G ++V H QHGN
Sbjct: 35 FRAEFLCPFCAEDYDVVSLCCHIDDHHPIQAKNGV--CPICGKKVGVDLVGHFTTQHGNF 92
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLS-FLCGAA 167
+ Q K + + S T+S RK+ ++ +S GSS + S S + DPLLS F+
Sbjct: 93 LRVQRKRRVRKGGSASTISILRKELQEGALQSLLGGSSYLAS-SNSEPDPLLSSFMFNPV 151
Query: 168 AAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
A E + P S+ + ++E+ DD + + + L ++D++EKARR +FVQGLLMST L
Sbjct: 152 VADESVSATPPSTEDALVKESSKDDFLKRKPQQLQLSEEDQVEKARRFEFVQGLLMSTIL 211
Query: 228 DPDL 231
D L
Sbjct: 212 DDKL 215
>Glyma09g04490.1
Length = 215
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
R + CPFC ED+D++ LCCHID H I+AK+GV CP+C +G ++V HI QHGN
Sbjct: 35 FRAEFLCPFCAEDYDVVSLCCHIDDHHPIQAKNGV--CPICGKKVGLDLVGHITTQHGNF 92
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLS-FLCGAA 167
+ Q K + + S T+S RK+ + S GSS + S + + DPLLS F+ A
Sbjct: 93 LRVQRKRRVRKVGSGSTMSILRKELREGALHSLLGGSSYLASCN-SEPDPLLSSFMFNPA 151
Query: 168 AAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
+ + +P S + ++E+ DD + + + L ++D++EKARR +FVQGLLMST L
Sbjct: 152 VTDDSASAKPPSVEDALVKESSKDDFLERKPQQLQLSEEDQVEKARRFEFVQGLLMSTIL 211
Query: 228 D 228
D
Sbjct: 212 D 212
>Glyma10g29030.2
Length = 191
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 34/184 (18%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
+R + CPFC E FD++ LCCHID +H +EAK+G
Sbjct: 41 IREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGR------------------------- 75
Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA 168
K K + SY TLS RK+ + + +S + GSS + S+S DPLLS
Sbjct: 76 -----KRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNA--DPLLSSFI-LPL 127
Query: 169 AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPS-LPDKDRIEKARRSKFVQGLLMSTFL 227
A EH + QP +E + D+TV R+VE S L KD+ EK +R +FVQGLL+ST L
Sbjct: 128 ANEHASSQPHLHTETRSSKKCLDETVSTRNVETSTLSVKDKEEKEKRCEFVQGLLLSTIL 187
Query: 228 DPDL 231
D +L
Sbjct: 188 DDNL 191
>Glyma20g23800.1
Length = 122
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 61 DFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQH 120
D+D++ LCCHID H ++AK GV CP+C +G ++V HI QHGN + Q K + +
Sbjct: 1 DYDVVSLCCHIDDHHPVQAKIGV--CPICGKKVGLDLVGHITMQHGNFLRVQRKRRVKKV 58
Query: 121 DSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL-SFLCGAAAAGEHQNVQPDS 179
S T+S RK+ + +S GSS + S S + DPLL SF+ A + + +P S
Sbjct: 59 GSGSTMSILRKELREGALQSLLGGSSYLAS-SNSEPDPLLSSFMFNPAVTDDSASAKPPS 117
>Glyma07g32120.1
Length = 233
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
+R +PCP+C EDFD+ L H++ +H E++ V +CP+C+V + +M+ HI QHG++
Sbjct: 42 VRPDFPCPYCYEDFDIASLSSHLEDEHSCESR--VTICPICSVKVARDMLNHITLQHGHL 99
Query: 109 FKSQLKSKRHQH--DSYPTLSFSRKDEEDRHWESFYAGSSPV-----TSTSETARDPLLS 161
FK Q + + + + TLS +D + H + G ++ A DP LS
Sbjct: 100 FKLQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGGGGYRSNSAAVSNAAATDPFLS 159
Query: 162 FL------CGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKAR-- 213
C A + D SS + H + + +PSL ++R ++ R
Sbjct: 160 SFILNFPACEAEEISKSVVTSADDSSSKNATPVH----IWKSSFDPSLSTEEREKRMRQA 215
Query: 214 --RSKFVQGLLMSTFL 227
RS FVQ L +ST L
Sbjct: 216 AGRSGFVQDLFLSTLL 231
>Glyma13g24420.1
Length = 237
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 49 LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
+R +PCP+C EDFD+ LC H++ +H E++ V +CP+C+ + NM+ HI QHG++
Sbjct: 42 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESR--VTICPICSDKVARNMLSHITLQHGHL 99
Query: 109 FKSQLKSKRHQH--DSYPTLSFSRKDEEDRHWE---------SFYAGSSPVTSTSETARD 157
K Q + + + + TLS +D + H + + + S ++ A D
Sbjct: 100 LKLQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGGGGGGYRSNSVAAAVSNAAATD 159
Query: 158 PLLSFLCGAAAAGEHQNVQPD--SSSELSIEETHSDDTVLERDVEPSLPDKDRIEKAR-- 213
P LS A E + + +S+E S + + + + + PSL ++R ++ R
Sbjct: 160 PFLSSFILNFPACEAEEISKSVVTSAENSSAKNATPEHIWKSSFGPSLSTEEREKRMRQA 219
Query: 214 --RSKFVQGLLMSTFL 227
RS FVQ L +ST L
Sbjct: 220 AGRSGFVQELFLSTLL 235
>Glyma16g17710.1
Length = 149
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 61 DFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQH 120
D+D++ LC HID H ++AK GV CP+C +G ++V HI QHGN + Q K + +
Sbjct: 1 DYDVVSLCFHIDDHHPVQAKIGV--CPICWKKVGLDLVRHITTQHGNFLRVQRKRRVRKV 58
Query: 121 DSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLS 161
S T+S RK+ + +S GSS ++S + DPLLS
Sbjct: 59 GSGSTMSILRKELREGALQSLL-GSSSYLASSNSEPDPLLS 98