Miyakogusa Predicted Gene

Lj1g3v4862830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4862830.1 Non Chatacterized Hit- tr|I1NBC1|I1NBC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26300 PE,83.75,0,DNA
repair protein MutS, domain I,DNA mismatch repair protein MutS,
N-terminal; DNA repair protein M,CUFF.33462.1
         (468 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40350.1                                                       657   0.0  
Glyma03g37750.1                                                       464   e-131
Glyma09g32150.1                                                       159   5e-39
Glyma07g09660.1                                                       159   5e-39
Glyma20g29680.1                                                        66   7e-11

>Glyma19g40350.1 
          Length = 1273

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/408 (81%), Positives = 353/408 (86%), Gaps = 3/408 (0%)

Query: 61  RAKVKPSGKAEPRKRKQSAPEKVEPVKKSKSGTEVGKGAFKLSVLEPTHNLDIIKTSNDA 120
           RAK K   K E +KRK S  EK EP KKSKSG EVGKGAFKLSVLEPT NL+I +TSN  
Sbjct: 219 RAKGK---KVETKKRKLSGTEKQEPAKKSKSGVEVGKGAFKLSVLEPTSNLEIKETSNGT 275

Query: 121 DNVATGDASERFALREAQKFRFLREDRKDAKRRRPEDENYDSRTLYLPPDFLRSLSDGQK 180
           DNVA  + SERFALREAQK RFL+EDR+DAKRRRP DENYDSRT+YLPPDFLRSLSDGQK
Sbjct: 276 DNVAITEISERFALREAQKLRFLKEDRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQK 335

Query: 181 QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVE 240
           QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKG+QPHCGFPEKNFSMNVE
Sbjct: 336 QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVE 395

Query: 241 KLARKGYRVLVVEQTETPEQLELRRKQKGSKDKVVRREICAVVTKGTLMDGELLSANPEA 300
           KLARKGYRVLVVEQT+TPEQLELRRK+KGSKDKVVRREIC+VVTKGTL DGELLSANPEA
Sbjct: 396 KLARKGYRVLVVEQTDTPEQLELRRKEKGSKDKVVRREICSVVTKGTLTDGELLSANPEA 455

Query: 301 AYLMALTXXXXXXXXXXSERTYGVCIVDVTTSRVILGQFKDDSECSALCCILSEIRPVEI 360
           AYLMALT          SE  YGVCIVDV TSRVILGQFKDD ECS LCCILSEIRPVEI
Sbjct: 456 AYLMALTEHHENHPTEVSEHLYGVCIVDVATSRVILGQFKDDLECSVLCCILSEIRPVEI 515

Query: 361 VKPAKLLSAETERVLVKHTRNPLVNELIPIVEFWDADKTLDQLKRIYRHTNDASVEDSGV 420
           VKPAKLLSAETERVL+KHTR+PLVNEL+PIVEFWDADKT+DQLKRIY ++ND SV ++ +
Sbjct: 516 VKPAKLLSAETERVLLKHTRDPLVNELVPIVEFWDADKTVDQLKRIYGNSNDVSVNNNEL 575

Query: 421 DCLPGVLLELVKTGDDSRXXXXXXXXXXXXXKQAFLDERLLRFAQFEL 468
           DCLP VLLELVKTGDDSR             +QAFLDERLLRFA+FEL
Sbjct: 576 DCLPDVLLELVKTGDDSRSALSALGGALYYLRQAFLDERLLRFAKFEL 623


>Glyma03g37750.1 
          Length = 765

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 237/320 (74%), Positives = 249/320 (77%), Gaps = 29/320 (9%)

Query: 149 DAKRRRPEDENYDSRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMD 208
           DAKRRRP DENYDSRTLYLPPDFLRSLS  QKQWWEFKSKHMDKVLFFKMGKFYELFEMD
Sbjct: 1   DAKRRRPGDENYDSRTLYLPPDFLRSLSYAQKQWWEFKSKHMDKVLFFKMGKFYELFEMD 60

Query: 209 AHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKQK 268
           AHVG KELDLQYMKG                       Y +LVVEQTETPEQ      +K
Sbjct: 61  AHVGEKELDLQYMKG-----------------------YCILVVEQTETPEQ------KK 91

Query: 269 GSKDKVVRREICAVVTKGTLMDGELLSANPEAAYLMALTXXXXXXXXXXSERTYGVCIVD 328
           GSKDKVVRREIC+VVTKGTL DGELLSANPEAAYLMALT          SE  YGVC VD
Sbjct: 92  GSKDKVVRREICSVVTKGTLTDGELLSANPEAAYLMALTEHHENHPTEVSEHIYGVCRVD 151

Query: 329 VTTSRVILGQFKDDSECSALCCILSEIRPVEIVKPAKLLSAETERVLVKHTRNPLVNELI 388
           V TSRVI GQFKDD ECSALCCILSEIRPVEIVKPAKLLSAETERVL+KHTRNPL+NEL+
Sbjct: 152 VATSRVIFGQFKDDLECSALCCILSEIRPVEIVKPAKLLSAETERVLLKHTRNPLLNELV 211

Query: 389 PIVEFWDADKTLDQLKRIYRHTNDASVEDSGVDCLPGVLLELVKTGDDSRXXXXXXXXXX 448
           PIVEFWDADKT+D+LKRIY  TND SV D+ +DCLP VLLELVKTGDDSR          
Sbjct: 212 PIVEFWDADKTVDKLKRIYGKTNDVSVNDNELDCLPDVLLELVKTGDDSRSALSALGGAL 271

Query: 449 XXXKQAFLDERLLRFAQFEL 468
              +QAF DERLLRFAQF+L
Sbjct: 272 YYLRQAFPDERLLRFAQFKL 291


>Glyma09g32150.1 
          Length = 1093

 Score =  159 bits (403), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 133/249 (53%), Gaps = 14/249 (5%)

Query: 137 AQKFRFLREDR-KDAKRRRPEDENYDSRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLF 195
           A KF +L   R +DA  RR  D  YD  TLY+PP+ L  +S  QKQ+W  K K+MD +LF
Sbjct: 188 ASKFEWLNPSRIRDANGRRSNDPLYDRTTLYIPPEALGKMSASQKQYWSVKCKYMDVLLF 247

Query: 196 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPEKNFSMNVEKLARKGYRVLVV 252
           FK+GKFYEL+EMDA +G KELD +        C   G  E      V+KL   GY+V  V
Sbjct: 248 FKVGKFYELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVQKLVACGYKVGRV 307

Query: 253 EQTETPEQLELRRKQKGSKDKVVRREICAVVTKGTLMDGELLSANPEAAYLMALTXXXXX 312
           EQ ET E+ + R       + V+RR++  VVT  T +DG +    P+A +L+++      
Sbjct: 308 EQLETSEEAKAR-----GANSVIRRKLVQVVTPSTNVDGNI---GPDAVHLLSI--KEEN 357

Query: 313 XXXXXSERTYGVCIVDVTTSRVILGQFKDDSECSALCCILSEIRPVEIVKPAKLLSAETE 372
                    YG   VD    R  +G   DD+ CSAL  +L ++ P E++   + LS E +
Sbjct: 358 NGLDNGAVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPTEVIYDNRGLSKEAQ 417

Query: 373 RVLVKHTRN 381
           + L K + N
Sbjct: 418 KALRKFSLN 426


>Glyma07g09660.1 
          Length = 1053

 Score =  159 bits (403), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 137/249 (55%), Gaps = 14/249 (5%)

Query: 137 AQKFRFLREDR-KDAKRRRPEDENYDSRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLF 195
           A KF +L   R +DA  RRP++  YD  TLY+PP+ L  +S  QKQ+W  K K+MD +LF
Sbjct: 185 ASKFEWLDPSRIRDANGRRPDNPLYDRTTLYIPPEVLGKMSASQKQYWSVKCKYMDVLLF 244

Query: 196 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPEKNFSMNVEKLARKGYRVLVV 252
           FK+GKFYEL+EMDA +G KELD +        C   G  E      V KL  +GY+V  V
Sbjct: 245 FKVGKFYELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVLKLVARGYKVGRV 304

Query: 253 EQTETPEQLELRRKQKGSKDKVVRREICAVVTKGTLMDGELLSANPEAAYLMALTXXXXX 312
           EQ ET  +     K +G+ + VVRR++  V+T  T +DG +    P+A +L+A+      
Sbjct: 305 EQLETSGE----AKSRGA-NSVVRRKLVQVLTPSTNVDGNI---GPDAVHLLAI--KEEN 354

Query: 313 XXXXXSERTYGVCIVDVTTSRVILGQFKDDSECSALCCILSEIRPVEIVKPAKLLSAETE 372
                    YG   VD    R  +G   DD+ CSAL  +L ++ P E++  ++ LS E +
Sbjct: 355 NVLDNGAVVYGFAFVDCARLRFWVGSIDDDASCSALGALLVQVSPKEVIYDSRGLSKEAQ 414

Query: 373 RVLVKHTRN 381
           + L K + N
Sbjct: 415 KALRKFSLN 423


>Glyma20g29680.1 
          Length = 835

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 11/204 (5%)

Query: 179 QKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPEKNFSM 237
           ++Q  + K+KH D +L  ++G  Y  F  DA   ++ L +  +M         P    ++
Sbjct: 99  EQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNV 158

Query: 238 NVEKLARKGYRVLVVEQTETPEQLELRRKQKGSKDKVVRREICAVVTKGTL-----MDGE 292
           +V +L   GY+V VV+QTET       +    ++     R + A+ TK TL     + G 
Sbjct: 159 HVRRLVTAGYKVGVVKQTETAA----IKAHGSNRSAPFERGLSALYTKATLEAAPDLGGA 214

Query: 293 LLSANPEAAYLMALTXXXXXXXXXXSERTYGVCIVDVTTSRVILGQFKDDSECSALCCIL 352
                 E+ YL+ +            +   G+  V+++T  V+ G+F D    SAL  ++
Sbjct: 215 EDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLRSALEAVV 274

Query: 353 SEIRPVEIVKPAKLLSAETERVLV 376
             + P E++     LS +TE++L+
Sbjct: 275 LNLSPAELLL-GDPLSKQTEKLLL 297