Miyakogusa Predicted Gene

Lj1g3v4830290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830290.1 tr|C1FIY8|C1FIY8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_63177
,42.27,0.0000000005,Nefa_Nip30_N,NEFA-interacting nuclear protein
NIP30, N-terminal; SUBFAMILY NOT NAMED,NULL; NEFA-INTE,CUFF.33408.1
         (212 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40910.1                                                       352   2e-97
Glyma03g38310.1                                                       351   3e-97

>Glyma19g40910.1 
          Length = 211

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 172/210 (81%), Positives = 188/210 (89%)

Query: 3   NDDTDLPIRIMNFVSEDQLAESKRTRGERVEDGTAHRDRPLYEILKEQKDKKDAEFNERF 62
           ++D+D PIRIMNFVSEDQL E+K+TRGERVEDGTA RDRPLYEILKE KDKKDAEFNERF
Sbjct: 2   DEDSDRPIRIMNFVSEDQLVEAKKTRGERVEDGTAQRDRPLYEILKENKDKKDAEFNERF 61

Query: 63  KHRPPKALDEDETEFLDNYETTRREYEQKVADEEAQQIRSFQAAVAVQSNTVHEIKENPP 122
           KHRPPKALDEDETEFLD YETTRREYE++VADEEAQQIRSFQAAV  QSN VHE+KE  P
Sbjct: 62  KHRPPKALDEDETEFLDTYETTRREYERQVADEEAQQIRSFQAAVEAQSNIVHEVKEKTP 121

Query: 123 LPIVQEEKPAGKRNPASRPLSMIIKVKPQTKKAKVDEGNAEEVSKARTTPVNDNNKSLEL 182
           LP+VQE+K AGK+NPAS PL MIIKVKPQ KKAKVD+GNAEE+SKA  TPVND +KSLE 
Sbjct: 122 LPVVQEQKSAGKKNPASGPLGMIIKVKPQAKKAKVDQGNAEEISKAGNTPVNDKSKSLET 181

Query: 183 VQSLNGEADKSHEIAQTGLVSYSDESDDDL 212
           VQ LNGEADKS  +A TGLVSYSDESD+DL
Sbjct: 182 VQPLNGEADKSQVVALTGLVSYSDESDEDL 211


>Glyma03g38310.1 
          Length = 210

 Score =  351 bits (900), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 172/210 (81%), Positives = 192/210 (91%), Gaps = 1/210 (0%)

Query: 3   NDDTDLPIRIMNFVSEDQLAESKRTRGERVEDGTAHRDRPLYEILKEQKDKKDAEFNERF 62
           ++D+D PIRIMNFVSEDQL E+K+TRGERVEDGTA RDRPLYEILKE KDKKDAEFNERF
Sbjct: 2   DEDSDRPIRIMNFVSEDQLVEAKKTRGERVEDGTAQRDRPLYEILKENKDKKDAEFNERF 61

Query: 63  KHRPPKALDEDETEFLDNYETTRREYEQKVADEEAQQIRSFQAAVAVQSNTVHEIKENPP 122
           KHRPPKALDEDETEFLDNYETTRREYE++VADEEA QI+SFQAAV  QSN VHE+KENPP
Sbjct: 62  KHRPPKALDEDETEFLDNYETTRREYERQVADEEALQIQSFQAAVEAQSNVVHEVKENPP 121

Query: 123 LPIVQEEKPAGKRNPASRPLSMIIKVKPQTKKAKVDEGNAEEVSKARTTPVNDNNKSLEL 182
           LP+VQE+K AGK+NPASRPL +IIKVKPQ KK KV++GNAEE+SKA  TPVND +KSLE 
Sbjct: 122 LPVVQEQKSAGKKNPASRPLGLIIKVKPQAKKTKVNQGNAEEISKAGNTPVNDRSKSLEP 181

Query: 183 VQSLNGEADKSHEIAQTGLVSYSDESDDDL 212
           VQ+LNGEADKS ++A TGLVSYSDESDDDL
Sbjct: 182 VQALNGEADKS-QVALTGLVSYSDESDDDL 210