Miyakogusa Predicted Gene

Lj1g3v4830120.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830120.2 Non Chatacterized Hit- tr|K4AXF2|K4AXF2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.84,0.00000000000002,seg,NULL; coiled-coil,NULL; SNF7 -
RELATED,NULL; Snf7,Snf7,CUFF.33366.2
         (337 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40990.1                                                       496   e-140
Glyma03g38400.1                                                       117   1e-26

>Glyma19g40990.1 
          Length = 347

 Score =  496 bits (1278), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/338 (73%), Positives = 283/338 (83%), Gaps = 4/338 (1%)

Query: 2   RTLDLVDPRSGRVSQLFRKVGSLITKSATPPDIVAEEFVVVTAVLKDKAAEVVKHLSENH 61
           RT+DL DP SGR SQL R+VG+LIT+  TP DI+AE+ V+VTA+LKDKAAEVVKHLSE+H
Sbjct: 9   RTVDLEDPTSGRFSQLVRRVGNLITRPPTP-DIMAEQCVIVTAMLKDKAAEVVKHLSESH 67

Query: 62  WNSSCIITMKKFQDVCGGPDEASVILRYLSGCRTAQYLSVHKKEFVEGVKISLSTAVLSS 121
           WNSSCI+TMKKFQD+CGGPDEASV+LRYLSGCRTAQYLSV+KK+F+EGVK+SLS   LSS
Sbjct: 68  WNSSCIVTMKKFQDMCGGPDEASVMLRYLSGCRTAQYLSVNKKDFLEGVKVSLSAGALSS 127

Query: 122 ISNLDYDVLYLIWTTEKLQQQLDVIDRRYELSRKSALASLHSGNKEVALRYVRELKLITQ 181
           I+NLDYDVL+LIWTTEKLQ QLDV DRRYEL RKSALASL SGNK++AL Y RELKL+TQ
Sbjct: 128 ITNLDYDVLHLIWTTEKLQLQLDVTDRRYELLRKSALASLQSGNKKLALNYARELKLVTQ 187

Query: 182 SREKCLSFLNRVEEVLSIISDAESTKKVSEAMQIGARAIKENKISVEDVDLCLRDLEESI 241
           SREKC S LNRVEEVLS+I+DAESTKKV+EAMQIGARAIKENKISVEDVDLCLRD++ESI
Sbjct: 188 SREKCSSLLNRVEEVLSVIADAESTKKVTEAMQIGARAIKENKISVEDVDLCLRDIQESI 247

Query: 242 DSQKEVEKALEQTPSHAYVXXXXXXXXFKKLEQAFGEEVQVPAPEKTIANAEGSDTSGAA 301
           DS KEVE ALE+ PS+  +        FKKLE A G++ QVPA EK   N EG   S AA
Sbjct: 248 DSHKEVENALERMPSYVDIEDEDIEEEFKKLELAVGQDAQVPALEKAF-NEEGRMASEAA 306

Query: 302 EFISDAFSNLKLSDGPAERPRITQV--SGSKKTANLEM 337
           +FISD FSNLKLSD PAE+P ITQ    G K T  LEM
Sbjct: 307 DFISDTFSNLKLSDRPAEKPGITQAVSEGDKITKKLEM 344


>Glyma03g38400.1 
          Length = 186

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 66/76 (86%), Gaps = 1/76 (1%)

Query: 2   RTLDLVDPRSGRVSQLFRKVGSLITKSATPPDIVAEEFVVVTAVLKDKAAEVVKHLSENH 61
           RT+DL DP SGR SQL  +V SLIT+S TP DI+AE+ V+VTA+LKDKAAEVV+HLSE+H
Sbjct: 90  RTVDLADPTSGRFSQLVWRVSSLITRSPTP-DIMAEQCVIVTAMLKDKAAEVVRHLSESH 148

Query: 62  WNSSCIITMKKFQDVC 77
           WNSSCI+TMKKF D+C
Sbjct: 149 WNSSCIVTMKKFHDIC 164