Miyakogusa Predicted Gene

Lj1g3v4830100.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830100.3 tr|A8IDN7|A8IDN7_CHLRE Pre-mRNA splicing factor
PRP38 family protein OS=Chlamydomonas reinhardtii
GN,52.81,8e-19,PRP38,Pre-mRNA-splicing factor 38;
UNCHARACTERIZED,Pre-mRNA-splicing factor 38,CUFF.33367.3
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39220.1                                                       181   2e-46
Glyma02g40900.1                                                       181   2e-46

>Glyma14g39220.1 
          Length = 444

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 84/88 (95%), Positives = 85/88 (96%)

Query: 1  MEIQTSGRPIGSLLEKVLCMIILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
          MEIQT GRPI SLLEKVLCM ILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1  MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61 GPSTSFCLLYKFFTMKLTVKQMHGLLKH 88
          GPST+FCLLYKFFTMKLTVKQMHGLLKH
Sbjct: 61 GPSTAFCLLYKFFTMKLTVKQMHGLLKH 88


>Glyma02g40900.1 
          Length = 428

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 84/88 (95%), Positives = 85/88 (96%)

Query: 1  MEIQTSGRPIGSLLEKVLCMIILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
          MEIQT GRPI SLLEKVLCM ILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1  MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61 GPSTSFCLLYKFFTMKLTVKQMHGLLKH 88
          GPST+FCLLYKFFTMKLTVKQMHGLLKH
Sbjct: 61 GPSTAFCLLYKFFTMKLTVKQMHGLLKH 88