Miyakogusa Predicted Gene

Lj1g3v4830100.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830100.2 Non Chatacterized Hit- tr|G3PQV1|G3PQV1_GASAC
Uncharacterized protein OS=Gasterosteus aculeatus
GN=P,55.79,2e-19,UNCHARACTERIZED,Pre-mRNA-splicing factor 38;
PRP38,Pre-mRNA-splicing factor 38,CUFF.33367.2
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39220.1                                                       199   5e-52
Glyma02g40900.1                                                       195   1e-50

>Glyma14g39220.1 
          Length = 444

 Score =  199 bits (506), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 94/97 (96%)

Query: 1  MEIQTSGRPIGSLLEKVLCMIILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
          MEIQT GRPI SLLEKVLCM ILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1  MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61 GPSTSFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAI 97
          GPST+FCLLYKFFTMKLTVKQMHGLLKHPDSPYIRA+
Sbjct: 61 GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAV 97


>Glyma02g40900.1 
          Length = 428

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/97 (93%), Positives = 93/97 (95%)

Query: 1  MEIQTSGRPIGSLLEKVLCMIILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
          MEIQT GRPI SLLEKVLCM ILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1  MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61 GPSTSFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAI 97
          GPST+FCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+
Sbjct: 61 GPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAV 97