Miyakogusa Predicted Gene

Lj1g3v4804240.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4804240.1 Non Chatacterized Hit- tr|I3SW12|I3SW12_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0.00000004,
,BP044597.path1.1
         (58 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g38800.1                                                        48   2e-06

>Glyma03g38800.1 
          Length = 510

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/25 (84%), Positives = 23/25 (92%)

Query: 31  GSAEIESQREFSDTDRSEIQSSREE 55
           GS EIESQ+E+SDTDRSEIQ SREE
Sbjct: 483 GSGEIESQKEYSDTDRSEIQDSREE 507