Miyakogusa Predicted Gene

Lj1g3v4804100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4804100.1 tr|C1MUT1|C1MUT1_MICPC Mitochondrial tRNA import
complex OS=Micromonas pusilla (strain CCMP1545)
GN=,46.72,0.000000000003,UCR_14kD,Cytochrome d ubiquinol oxidase,
14kDa subunit; Q84M34_ORYSA_Q84M34;,Cytochrome d ubiquinol
,CUFF.33292.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g31280.1                                                       176   5e-45
Glyma14g15170.1                                                       174   2e-44
Glyma17g31280.3                                                       142   1e-34
Glyma17g31280.2                                                       107   3e-24

>Glyma17g31280.1 
          Length = 122

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 96/122 (78%)

Query: 1   MASLLQSFIDPKKNWLARVHMKTISQXXXXXXXXXXXXXXXXXXXXIKEALNRLPKEVVD 60
           MAS LQSF+DPKKNW A  HMK++S+                    +KEALNRLPKEVVD
Sbjct: 1   MASFLQSFLDPKKNWFAAQHMKSLSKRLRKYGLRYDDLYDPYYDLDVKEALNRLPKEVVD 60

Query: 61  ARHARLKRAIDLSMKHEYLPEDLQAMQTPFRSYLQDMLTFVKKERAEREALGGLPLYQRT 120
           ARHARLKRAIDLSMKHEYLP++LQ+MQTPFR YLQDMLT VK+ERAEREALGGLPLYQR+
Sbjct: 61  ARHARLKRAIDLSMKHEYLPDNLQSMQTPFRGYLQDMLTLVKRERAEREALGGLPLYQRS 120

Query: 121 LP 122
           +P
Sbjct: 121 IP 122


>Glyma14g15170.1 
          Length = 122

 Score =  174 bits (440), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query: 1   MASLLQSFIDPKKNWLARVHMKTISQXXXXXXXXXXXXXXXXXXXXIKEALNRLPKEVVD 60
           MAS LQ F+DPKKNW A  HMK++S+                    +KEALNRLPKEVVD
Sbjct: 1   MASFLQWFLDPKKNWFAAQHMKSLSRRLRKYGLRYDDLYDPYYDLDVKEALNRLPKEVVD 60

Query: 61  ARHARLKRAIDLSMKHEYLPEDLQAMQTPFRSYLQDMLTFVKKERAEREALGGLPLYQRT 120
           ARHARLKRAIDLSMKHEYLP++LQAMQTPFR YLQDMLT VK+ERAEREALGGLPLYQR+
Sbjct: 61  ARHARLKRAIDLSMKHEYLPDNLQAMQTPFRGYLQDMLTLVKRERAEREALGGLPLYQRS 120

Query: 121 LP 122
           +P
Sbjct: 121 IP 122


>Glyma17g31280.3 
          Length = 107

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 78/104 (75%)

Query: 1   MASLLQSFIDPKKNWLARVHMKTISQXXXXXXXXXXXXXXXXXXXXIKEALNRLPKEVVD 60
           MAS LQSF+DPKKNW A  HMK++S+                    +KEALNRLPKEVVD
Sbjct: 1   MASFLQSFLDPKKNWFAAQHMKSLSKRLRKYGLRYDDLYDPYYDLDVKEALNRLPKEVVD 60

Query: 61  ARHARLKRAIDLSMKHEYLPEDLQAMQTPFRSYLQDMLTFVKKE 104
           ARHARLKRAIDLSMKHEYLP++LQ+MQTPFR YLQDMLT VK+E
Sbjct: 61  ARHARLKRAIDLSMKHEYLPDNLQSMQTPFRGYLQDMLTLVKRE 104


>Glyma17g31280.2 
          Length = 106

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 60/84 (71%)

Query: 1  MASLLQSFIDPKKNWLARVHMKTISQXXXXXXXXXXXXXXXXXXXXIKEALNRLPKEVVD 60
          MAS LQSF+DPKKNW A  HMK++S+                    +KEALNRLPKEVVD
Sbjct: 1  MASFLQSFLDPKKNWFAAQHMKSLSKRLRKYGLRYDDLYDPYYDLDVKEALNRLPKEVVD 60

Query: 61 ARHARLKRAIDLSMKHEYLPEDLQ 84
          ARHARLKRAIDLSMKHEYLP++LQ
Sbjct: 61 ARHARLKRAIDLSMKHEYLPDNLQ 84