Miyakogusa Predicted Gene

Lj1g3v4766290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4766290.1 Non Chatacterized Hit- tr|F6H6U2|F6H6U2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.75,0.000000000000007,Ribonuclease H-like,Ribonuclease H-like
domain; no description,NULL; no description,Exonuclease;
seg,CUFF.33219.1
         (332 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39230.1                                                       405   e-113
Glyma19g41790.1                                                       404   e-113
Glyma10g29010.1                                                       336   3e-92
Glyma20g38310.1                                                       112   7e-25

>Glyma03g39230.1 
          Length = 329

 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/326 (66%), Positives = 238/326 (73%), Gaps = 8/326 (2%)

Query: 1   MKTGSMIFSLLQLPRCRIHSLANYWGETXXXXXXXX-XXXXIRLLSSRINGLQEGHRKKW 59
           MKTGSMIFSL  +PRCRI SLAN WGET             IRLL SRI GLQ G RKKW
Sbjct: 1   MKTGSMIFSLFHVPRCRIQSLANCWGETFHGFSTTCGNNSSIRLLGSRIYGLQGGQRKKW 60

Query: 60  TRRPITTNTEGKGGTKSRSTKHEIXXXXXXXXXXXXXNKTQLGEFQDIQYCDVK-EIAQK 118
           TR PITTNTEGKG TKS+S KHEI             NKTQL + Q+IQ CD++ EIA+ 
Sbjct: 61  TR-PITTNTEGKGSTKSKSIKHEILSETILANATANVNKTQLDQSQEIQDCDIQQEIAEN 119

Query: 119 KNLSSLVTVIAFDIETTGCGAKKHRSIEIALRDRQGGENSTFQTLVNPQRYVPNSDVHGI 178
           K+LSS  TVI FDIETTG   +  R IEIALRD QGGENSTFQTLVNPQ  VPNS +HGI
Sbjct: 120 KDLSSY-TVIVFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGI 178

Query: 179 TNQMVNSPDVPRMEDLIPILLHYVRSREKPGGYVLWVAHNARSFDVPFFINELGRSSVKI 238
           T QMVN PDVPRMEDLIPIL  YVRSREKPGG VL+VAHNAR FDVPF I+EL R S+KI
Sbjct: 179 TTQMVNKPDVPRMEDLIPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRYSIKI 238

Query: 239 PSNWLFLDTLPLGRELMMKLKAESEEKKPPANLAALCEHYNVKLNGAAHRAMVDVDALSV 298
           P NWLFLDTLPL RELM               LAAL + Y +K++G+AHRAMVDV+ LS+
Sbjct: 239 PPNWLFLDTLPLARELMKSGGTTLSSSS----LAALRDLYGIKVDGSAHRAMVDVNTLSL 294

Query: 299 IFSRLTFDLKLTLSDLVEKSFQESDI 324
           I SRLT DLKLTLSDLV+KSF ESDI
Sbjct: 295 ILSRLTSDLKLTLSDLVDKSFTESDI 320


>Glyma19g41790.1 
          Length = 329

 Score =  404 bits (1038), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/335 (65%), Positives = 243/335 (72%), Gaps = 11/335 (3%)

Query: 1   MKTGSMIFSLLQLPRCRIHSLANYWGETXXXXXXXX-XXXXIRLLSSRINGLQEGHRKKW 59
           MKTGSMIFSLL +PR RI SLAN WGET             +RLL SRI GLQ G RKKW
Sbjct: 1   MKTGSMIFSLLHVPRFRIQSLANCWGETFHSFSTTCGNNSNVRLLGSRIYGLQGGQRKKW 60

Query: 60  TRRPITTNTEGKGGTKSRSTKHEIXXXXXXXXXXXXXNKTQLGEFQDIQYCDVK-EIAQK 118
           TR PITTN EGKG TKS+S KHEI             NKTQL + Q+IQYCD++ EIA+ 
Sbjct: 61  TR-PITTNIEGKGSTKSKSIKHEILSETILANATVNVNKTQLDKSQEIQYCDIQQEIAEN 119

Query: 119 KNLSSLVTVIAFDIETTGCGAKKHRSIEIALRDRQGGENSTFQTLVNPQRYVPNSDVHGI 178
           K+LSS  TVI FDIETTG   +  R IEIALRD QGGENSTFQTLVNPQ  VPNS +HGI
Sbjct: 120 KDLSSY-TVIVFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGI 178

Query: 179 TNQMVNSPDVPRMEDLIPILLHYVRSREKPGGYVLWVAHNARSFDVPFFINELGRSSVKI 238
           T  MVN P VPRMEDLIPILL YVRSREKPGG V++VAHNAR FDVPF INEL R SV+I
Sbjct: 179 TTHMVNKPGVPRMEDLIPILLQYVRSREKPGGDVIFVAHNARCFDVPFIINELRRYSVEI 238

Query: 239 PSNWLFLDTLPLGRELMMKLKAESEEKKPPANLAALCEHYNVKLNGAAHRAMVDVDALSV 298
           P NWLFLDTLPL REL+              +LAAL + Y +K++G+AHRAMVDV+ALS+
Sbjct: 239 PPNWLFLDTLPLARELI----KSGGTTLSSTSLAALRDLYGIKVDGSAHRAMVDVNALSL 294

Query: 299 IFSRLTFDLKLTLSDLVEKSFQESDIT---KKKKN 330
           I SRLT DLKLTLSDLV+KSF ESDI     KKKN
Sbjct: 295 ILSRLTSDLKLTLSDLVKKSFTESDIINSKNKKKN 329


>Glyma10g29010.1 
          Length = 309

 Score =  336 bits (861), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/336 (54%), Positives = 218/336 (64%), Gaps = 33/336 (9%)

Query: 1   MKTGSMIFSLLQLPRCRIHSLANYWGETX--XXXXXXXXXXXIRLLSSRINGLQEGHRKK 58
           M+TGS+IFSLLQ+PRC+IHSLANY  E               IRLL  RI GL+ G   K
Sbjct: 1   MRTGSLIFSLLQVPRCKIHSLANYGEEALHGFSKAYGNNNSSIRLLGPRIYGLERGLNTK 60

Query: 59  WTRRPITTNTEGKGGTKSRSTKHEIXXXXXXXXXXXXXNKTQLGEFQDIQYCDVKEIAQK 118
             +R I T  EG   T S +T  +I                         Y DV+EIAQ 
Sbjct: 61  LIQRLIATRAEGSKQTTSSATAKKIL------------------------YPDVQEIAQY 96

Query: 119 KNLSSLVTVIAFDIETTGCGAKKHRSIEIALRDRQGGENSTFQTLVNPQRYVPNSDVHGI 178
           +NLS LVT+I FD+ETTG      R IEIALRD +GGENSTFQTLVNPQ +VPNS +HGI
Sbjct: 97  ENLSDLVTIIVFDLETTGYSKVNDRIIEIALRDLKGGENSTFQTLVNPQCHVPNSRIHGI 156

Query: 179 TNQMVNSPDVPRMEDLIPILLHYVRSREKPGGYVLWVAHNARSFDVPFFINELGRSSVKI 238
           + +MVN PDVPRMEDLIPILL Y++SREK GGYVLW+AHN R+FD PF I+E  R   ++
Sbjct: 157 STKMVNIPDVPRMEDLIPILLQYIKSREKQGGYVLWIAHNGRAFDAPFLIHEFFRCCAEL 216

Query: 239 PSNWLFLDTLPLGRELMMKLKAESEEKKPPANLAALCEHYNVKLNGAAHRAMVDVDALSV 298
           P N LFLDTLPLGREL   +K+E       A+L AL E Y VK++G+AHRAMVDV+ LS 
Sbjct: 217 PRNSLFLDTLPLGREL---IKSEGRNLS-SASLVALREFYKVKVDGSAHRAMVDVNTLSQ 272

Query: 299 IFSRLTFDLKLTLSDLVEKSFQESDIT---KKKKNS 331
           I   LT+DLKLTLSDL+ KS   SD+    K KKNS
Sbjct: 273 ILPMLTYDLKLTLSDLIRKSLNISDLINAKKTKKNS 308


>Glyma20g38310.1 
          Length = 107

 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 77/120 (64%), Gaps = 14/120 (11%)

Query: 191 MEDLIPILLHYVRSREKPGGYVLWVAHNARSFDVPFFINELGRSSVKIPSNWLFLDTLPL 250
           MEDLIPILL Y++SREK GGYVL V H AR+FD PF I+E  R S +          LPL
Sbjct: 1   MEDLIPILLQYIKSREKHGGYVLLVDHIARTFDAPFLIHEFIRCSTE----------LPL 50

Query: 251 GRELMMKLKAESEEKKPPANLAALCEHYNVKLNGAAHRAMVDVDALSVIFSRLTFDLKLT 310
           GREL+      S      A+L AL E Y VK++G+AHRA VDV++L+ I   LT DLKLT
Sbjct: 51  GRELI----KSSGTNLSSASLVALQEFYEVKVDGSAHRARVDVNSLTQILPMLTPDLKLT 106