Miyakogusa Predicted Gene
- Lj1g3v4766270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4766270.1 tr|J9J073|J9J073_9SPIT RING/U-box protein
OS=Oxytricha trifallax PE=4 SV=1,34.55,1e-17,SUBFAMILY NOT NAMED,NULL;
SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING
PROTEIN,NU,CUFF.33218.1
(857 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g38280.1 738 0.0
Glyma10g29040.1 598 e-171
Glyma08g02750.1 70 7e-12
Glyma13g23910.1 57 9e-08
Glyma19g01310.1 57 9e-08
Glyma19g05660.1 55 3e-07
Glyma17g08990.1 55 4e-07
Glyma01g42890.1 52 2e-06
>Glyma20g38280.1
Length = 794
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/564 (66%), Positives = 415/564 (73%), Gaps = 31/564 (5%)
Query: 295 YEFTISEEEREQVREAKKXXXXXXXXXXXXXXXMENEEVGVYEDLNQQPKPPGRKGKEKS 354
+EFTISEEEREQVREAK+ + NEEVGV+E + Q KPP RKGKEK
Sbjct: 261 FEFTISEEEREQVREAKRLCGNLRNNLRSSSHLINNEEVGVHEYQHPQRKPPARKGKEKI 320
Query: 355 EEPQGRKGKEKVGNSKSEVGKQVCGICLSEENKRRVRGVLDCCTHYFCFTCIMEWSKVET 414
EEP GRKGKEKV + KS+ GKQ CGICLSEE+KRRVRGVL+CCTH+FCF CIMEW+KVE+
Sbjct: 321 EEPLGRKGKEKVEDLKSK-GKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVES 379
Query: 415 RCPLCKQRFKTINKPTRSTAGLDLREVVIQVPERDQVYQPSEEELRSYIDPYETVLCSEC 474
RCPLCKQRFK I+KP RST G+DLREVVIQVPERDQVYQPSEEELRSYIDPYE V+CSEC
Sbjct: 380 RCPLCKQRFKAISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVICSEC 439
Query: 475 HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQIQERVADSR 534
HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVAL S +SQ+QE VAD R
Sbjct: 440 HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADPR 499
Query: 535 VSTQNPSVRSSPVLHSQESIDLNLTSSP-GPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 593
VS Q+ VR PVLH +ESIDLNL SSP
Sbjct: 500 VSVQSHPVRPPPVLHVRESIDLNLISSPRAAFNQGFGHLPSSRFSGRSAEGASPVSGGAP 559
Query: 594 TLSERRWIHRQIHQLLSTDRMTSTTGRTNSISALSSTSNLQNTQIDQSREPTTQHTRTQD 653
TLSERRWIHRQI QLLS DRM ST GRTN ISA SSTSNL ++ DQSR TT H RTQD
Sbjct: 560 TLSERRWIHRQIQQLLSIDRMASTPGRTNGISATSSTSNLYSSHFDQSRGTTTLHARTQD 619
Query: 654 VGTSYHTLVEERLRNDISPLMQNGDPFSTIVSNSRRPIIEDSTMLSNRPVNGVLWPGLLG 713
VGTSYHT +ERL N+ SPLMQNG LW GL+G
Sbjct: 620 VGTSYHTFFDERLCNNSSPLMQNG----------------------------ALWSGLMG 651
Query: 714 TPTLSDHQPIHQFSSRPNSAIESSLSPAIKEESNFHIVKEQVRAMVKSHLQSLSRDIDLG 773
TP + D + +HQFS R N + LSPA++EESNFH KEQ+++MVKSHL+SLS++IDLG
Sbjct: 652 TPPVPDCEQVHQFS-RSNIVPDGGLSPAVREESNFHFAKEQLQSMVKSHLKSLSQNIDLG 710
Query: 774 HSTFKDIARSSTHTLLAACGLEHRKSEVCTVAPPPVCHHMEQIAGEQTSLIKDCCSSCFD 833
H+T KDIARSS HT+LAAC LEH KSEVCTV PP C HME +AG QTSLIK CCSSCFD
Sbjct: 711 HNTIKDIARSSMHTILAACDLEHMKSEVCTVPPPSACSHMELMAGGQTSLIKGCCSSCFD 770
Query: 834 RFVVDVVKKILDTTMSSQWLRLGL 857
FV DVVK+ILDT +SSQWLRLGL
Sbjct: 771 SFVGDVVKRILDTRISSQWLRLGL 794
>Glyma10g29040.1
Length = 759
Score = 598 bits (1542), Expect = e-171, Method: Compositional matrix adjust.
Identities = 304/472 (64%), Positives = 341/472 (72%), Gaps = 31/472 (6%)
Query: 295 YEFTISEEEREQVREAKKXXXXXXXXXXXXXXXMENEEVGVYEDLNQQPKPPGRKGKEKS 354
+EFTISEEEREQVREAK+ + N+E GV+ED ++Q KPP RKGKEK
Sbjct: 312 FEFTISEEEREQVREAKRLCGNLRNNLRSSSHPI-NKEAGVHEDQHRQRKPPARKGKEKI 370
Query: 355 EEPQGRKGKEKVGNSKSEVGKQVCGICLSEENKRRVRGVLDCCTHYFCFTCIMEWSKVET 414
EEPQGRKGKEKV + KSE GKQ CGICLSEE+KRRVRGVL+CCTH+FCF CIMEW+KVE+
Sbjct: 371 EEPQGRKGKEKVEDLKSEKGKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVES 430
Query: 415 RCPLCKQRFKTINKPTRSTAGLDLREVVIQVPERDQVYQPSEEELRSYIDPYETVLCSEC 474
RCPLCKQRFKTI+KP RST G+DLREVVIQVPERDQVYQPSEEELRSYIDPYE V+CSEC
Sbjct: 431 RCPLCKQRFKTISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVMCSEC 490
Query: 475 HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQIQERVADSR 534
HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVAL S +SQ+QE VAD R
Sbjct: 491 HQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADPR 550
Query: 535 VSTQNPSVRSSPVLHSQESIDLNLTSSP-GPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 593
VS Q+ +R P LH +ESIDLNL SSP
Sbjct: 551 VSVQSHPIRPPPALHVRESIDLNLISSPRAAFNQGFGHLPSSRFSGRSVEGASPVSGGAP 610
Query: 594 TLSERRWIHRQIHQLLSTDRMTSTTGRTNSISALSSTSNLQNTQIDQSREPTTQHTRTQD 653
TLSERRWIHRQI QLLS DRM S+ GRTN +SA SSTSNL ++QIDQSR T H RTQD
Sbjct: 611 TLSERRWIHRQIQQLLSIDRMASSPGRTNGVSATSSTSNLYSSQIDQSRGTATLHARTQD 670
Query: 654 VGTSYHTLVEERLRNDISPLMQNGDPFSTIVSNSRRPIIEDSTMLSNRPVNGVLWPGLLG 713
VGTSYHT +ERL N+ SPLMQNG LWPGL+G
Sbjct: 671 VGTSYHTFFDERLCNNSSPLMQNG----------------------------ALWPGLMG 702
Query: 714 TPTLSDHQPIHQFSSRPNSAIESSLSPAIKEESNFHIVKEQVRAMVKSHLQS 765
T + D + HQFS R N +S LSPAI+EESNFHI KEQ+++MVKSHL++
Sbjct: 703 TTPVPDCELAHQFS-RSNIVPDSGLSPAIREESNFHIAKEQLQSMVKSHLKN 753
>Glyma08g02750.1
Length = 177
Score = 70.5 bits (171), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 378 CGICLSEENKRRVRGVLDCCTHYFCFTCIMEWSKVETRCPLCKQRFKTIN-KPTRSTAGL 436
CGIC+ R G+LDCC H+FCF CI W+ + CPLC+ F+ I P T G
Sbjct: 10 CGICMDMVIDR---GLLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGN 66
Query: 437 DLREVVIQVPERDQVYQPSEEELR--SYIDPYETVLC-----SECHQG-----GDDGL-- 482
+ E + D + L SY V+C + G GD L
Sbjct: 67 NKVEDDSFFRDDDWSIEEKNNTLSFPSYYIDENAVICLDGDGCKVRNGLATIEGDSDLDT 126
Query: 483 MLLCDICDSPAHTYCVGLGRE-VPEGNWYC 511
+ CD CD H +CVG E + W C
Sbjct: 127 SIACDSCDIWYHAFCVGFDTEGTSDSTWLC 156
>Glyma13g23910.1
Length = 2142
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 465 PYETVLCSECHQGGDDGLMLLCDICDSPAHTYCVG--LGREVPEGNWYCDGC 514
P++ +C C DD +LLCD CD+ HTYC+ L R +PEGNWYC C
Sbjct: 1286 PWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLAR-IPEGNWYCPSC 1336
>Glyma19g01310.1
Length = 2092
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 465 PYETVLCSECHQGGDDGLMLLCDICDSPAHTYCVG--LGREVPEGNWYCDGC 514
P++ +C C DD +LLCD CD+ HTYC+ L R +PEGNWYC C
Sbjct: 1223 PWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLAR-IPEGNWYCPSC 1273
>Glyma19g05660.1
Length = 468
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 378 CGICLSEENKRRVRGVLDCCTHYFCFTCIMEWSKVETR------CPLCKQRFKTINKPTR 431
C ICL+E + RG+L C H FCF CI W+ T CPLCK F I K
Sbjct: 316 CVICLTEFSS--TRGILPC-GHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKK-VE 371
Query: 432 STAGLDLREVVIQVP---ERDQVYQPSEEELRSYI-DPYETVLCSECHQGGDDGLMLLCD 487
A D + +P ++ P ++ L I + ++ C C + L+ CD
Sbjct: 372 HAATADQKIYSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESCD 431
Query: 488 ICD-SPAHTYCVGLGREVPEGNWYCDGCRPVAL 519
+C H+YC+ + P W C C+ + +
Sbjct: 432 VCHIRKIHSYCM----DPPLRPWICTHCKELRM 460
>Glyma17g08990.1
Length = 204
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 464 DPYETVLCSECHQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGC 514
D Y C CH G D+ L+LLCD+CD+ +HTYCVGLG VPEG+W+C C
Sbjct: 7 DSYTETKCGVCHAGTDEHLLLLCDLCDTASHTYCVGLGYTVPEGDWFCHDC 57
>Glyma01g42890.1
Length = 1362
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 470 LCSECHQGGDDGLMLLCDICDSPAHTYCVGLGRE-VPEGNWYCDGC 514
+C +C G LMLLCD CD HTYC+ E +P GNWYC C
Sbjct: 184 ICEQCKSGLHGELMLLCDRCDKGWHTYCLSPPLEHIPPGNWYCFNC 229