Miyakogusa Predicted Gene
- Lj1g3v4764360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4764360.1 tr|B9I9Y2|B9I9Y2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_572763 PE=4
SV=1,24.74,0.0005,seg,NULL; BRCT domain,BRCT domain; BRCT,BRCT domain;
coiled-coil,NULL; no description,NULL; PAX TRAN,CUFF.33192.1
(859 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g36660.1 465 e-131
Glyma19g39310.1 372 e-102
Glyma15g10570.1 276 5e-74
Glyma13g28520.1 276 1e-73
Glyma13g28550.2 275 1e-73
Glyma13g28550.1 234 3e-61
Glyma19g31520.1 60 8e-09
Glyma03g28780.1 60 1e-08
>Glyma03g36660.1
Length = 515
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/432 (57%), Positives = 285/432 (65%), Gaps = 66/432 (15%)
Query: 435 NRLNHQVLVSPRLSATSSFSSIDSWVYLKRPRGKRKRANVQTNPNAPATLCIDGKESNIY 494
+RLNH VSP+LSATSSFS DSWVY KR RGKRK ANV T+ +AP
Sbjct: 136 SRLNHLAQVSPQLSATSSFSRTDSWVYPKRSRGKRKGANVGTSLDAPTA----------- 184
Query: 495 STRCLEGQDVDKSCNTRSPCNASSIVNGRCVLQGTYVQPGSAGNAITSEENLHDIRPLLQ 554
G +V PGSAG+A+ E NL D+ PLL
Sbjct: 185 ---------------------------------GNFVPPGSAGDAMKVE-NLPDMHPLLL 210
Query: 555 AHVEILSNKSAAKLGLDIPATVASSESIKISNASHTYNKNHXXXXXXXXXXXXXXXXXIR 614
AHV I SNKS A+ ++PATV +S+ IK+ + IR
Sbjct: 211 AHVGISSNKSIAQSRSEMPATVTASKGIKLCEKT--------------LPKTSVLKELIR 256
Query: 615 LGVPESSPVLVWRDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATH 674
LG P+ + +W+DLRHRRDM VRVLFSQHL+DS++K+QKKILAR NI +AS SMEATH
Sbjct: 257 LGAPKFTSDKMWKDLRHRRDMTDVRVLFSQHLDDSIMKQQKKILARLNISVASCSMEATH 316
Query: 675 FVADKFTRTKNMLEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPA 734
F+ADKFTRT+NMLE MALGK+VV HLWLESCGQANCFIDEKNYILRDMKKEKEIGF+MP
Sbjct: 317 FIADKFTRTRNMLETMALGKLVVNHLWLESCGQANCFIDEKNYILRDMKKEKEIGFNMPV 376
Query: 735 SLARARQKPLLKGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQI-------CGXXXXX 787
SLARARQKPLLKG+RVYITPHIKPDKE+V +LVTAVH Q+ I
Sbjct: 377 SLARARQKPLLKGKRVYITPHIKPDKEVVASLVTAVHAQLTGGCNIRRVWAILIYYMNDN 436
Query: 788 XXXXXXXXSCEDDYAICCDFLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRRINPS 847
SCEDDYAIC FLKRGTAVYSSELVLNGIV+QKLE ERH+LFMNQV R NPS
Sbjct: 437 VFDDLLILSCEDDYAICHRFLKRGTAVYSSELVLNGIVIQKLELERHQLFMNQVTRNNPS 496
Query: 848 TSNRFGKVYRRR 859
SNRFGK+YRRR
Sbjct: 497 VSNRFGKIYRRR 508
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 84/156 (53%), Gaps = 41/156 (26%)
Query: 259 QFGNDTSKPIYSEHVPLED-------GCSLGKYVSFQPSAREPRNLSNESKWTRIKDQPS 311
QF NDT +P + L D CSLG++ SFQP+A E + +NES+ TRIKDQ S
Sbjct: 61 QF-NDTHQPENALDGSLSDLTENEAQVCSLGEHTSFQPAAEESEDWNNESRQTRIKDQQS 119
Query: 312 HHTAKDNNVKEKGVIRHKKGNGLVADPVKLGVKTKHPKLPTNSCGEARKSRLNHQVLVSP 371
H T +NNVKEK ARKSRLNH VSP
Sbjct: 120 HLTEGNNNVKEK---------------------------------VARKSRLNHLAQVSP 146
Query: 372 RLSATSSFSSMDSWVYPKRPRGKGKRANVQINPNAP 407
+LSATSSFS DSWVYPKR RGK K ANV + +AP
Sbjct: 147 QLSATSSFSRTDSWVYPKRSRGKRKGANVGTSLDAP 182
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 62/82 (75%)
Query: 111 MATENNNSLKELDAELRATRENLNVYSNVPHTEGMYDIGLDTQIAAEAMDALANEPPPAF 170
MAT+NNNS KELD + A EN+NVYS+V H E M+DIGLDTQIAAEAM+ALA PP
Sbjct: 1 MATKNNNSPKELDVQPIAINENVNVYSSVTHIEDMHDIGLDTQIAAEAMNALAFVPPSGC 60
Query: 171 CFNDADQPENAFGGSLSDLNED 192
FND QPENA GSLSDL E+
Sbjct: 61 QFNDTHQPENALDGSLSDLTEN 82
>Glyma19g39310.1
Length = 583
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/373 (54%), Positives = 242/373 (64%), Gaps = 59/373 (15%)
Query: 435 NRLNHQVLVSPRLSATSSFSSIDSWVYLKRPRGKRKRANVQTNPNAPATLCIDGKESNIY 494
+RLNH VSP+LSA S +CIDGKE+N++
Sbjct: 265 SRLNHLAQVSPQLSAIS-------------------------------IVCIDGKENNVF 293
Query: 495 STRCLEGQD-VDKSC--NTRSPCNASSIVNGRCVLQGTYVQPGSAGNAITSEENLHDIRP 551
S R LE QD VDK C +T CNAS SAG+A+ + NLHD+ P
Sbjct: 294 SPRGLEDQDDVDKPCFPHTHPLCNASC----------------SAGDAMKVD-NLHDMHP 336
Query: 552 LLQAHVEILSNKSAAKLGLDIPATVASSESIKISNASHTYNKNHXXXXXXXXXXXXXXXX 611
LL AHVE+ SNKS A+ +IPATV +S+ IK +
Sbjct: 337 LLLAHVELSSNKSIAQSRSEIPATVTASKGIK--------HHKKPCEKSLPKTSVSVLKE 388
Query: 612 XIRLGVPESSPVLVWRDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSME 671
IRLGVPE + ++W+ LRHRRDM V+VLFSQHL+DS+IK+QKKILAR NI +ASSS+E
Sbjct: 389 LIRLGVPEFTSDMMWKHLRHRRDMTDVQVLFSQHLDDSIIKQQKKILARLNISVASSSIE 448
Query: 672 ATHFVADKFTRTKNMLEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFS 731
ATHF+ADKFTRTKNMLE MALGK+VV HLWLESCGQANCFIDE+NYILRDMKKEK+IGF+
Sbjct: 449 ATHFIADKFTRTKNMLETMALGKLVVNHLWLESCGQANCFIDEENYILRDMKKEKQIGFN 508
Query: 732 MPASLARARQKPLLKGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXX 791
MP SLA+ARQKPLLKG+RVYITPHIKPDKE++ +LVT VHGQV+DES +C
Sbjct: 509 MPVSLAQARQKPLLKGKRVYITPHIKPDKEVLVSLVTDVHGQVVDESGVCADMNDNSLDD 568
Query: 792 XXXXSCEDDYAIC 804
SCEDDYAIC
Sbjct: 569 LLILSCEDDYAIC 581
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 196/433 (45%), Gaps = 156/433 (36%)
Query: 1 MDSFEGIHCRKITREKSPNVMIAGGVGPLSLAKKIKARTHNEAKEPFKWVGCDKNDKNAD 60
+D F+ IH K TREKSP V+ GPL+LAKKIKART N +
Sbjct: 29 VDLFQVIHYGKTTREKSPYVL--SSRGPLNLAKKIKARTQNTNR---------------- 70
Query: 61 IFCEKVEASANFRSYRLAYKRRRQKKDDPLQNQGNCSPGNRCDKSVQGPRMATENNNSLK 120
+ R + KK K QGPR TENNNSLK
Sbjct: 71 ------------------HIREKDKK-----------------KLRQGPRTETENNNSLK 95
Query: 121 ELDAELRATRENLNVYSNVPHTEGMYDIGLDTQIAAEAMDALANEPPPAFCFNDADQPEN 180
ELD + A EN+NVYS+V H E +YDIGLDTQ +A E A F
Sbjct: 96 ELDVQPSAISENVNVYSSVTHIEDLYDIGLDTQ--------IAAEAMNALAF-------- 139
Query: 181 AFGGSLSDLNEDCQKSYSYRQDPALHSVTLKSNKINVSSCRFRKLTSSSSCLDTENQEPN 240
+ S C SSC T+ QEP+
Sbjct: 140 ----------------------------------VPPSGCH-------SSCKHTDKQEPS 158
Query: 241 CVTGXXXXXXXXXXXVEGQFGNDTSKPIYSEHVPLEDGCSLGKYVSFQPSAREPRNLSNE 300
V+ EGQ N+TS PI C K S QP+A EP++ +NE
Sbjct: 159 LVSWKMKKMRSKPNS-EGQIDNNTSLPI----------C---KSTSLQPAAEEPKDWNNE 204
Query: 301 SKWTRIKDQPSHHTAKDNNVKEKGVIRHKKGNGLVADPVKLGVKTKHPKLPTNSCGEARK 360
S+ TRIKDQPSHHT +NNV EKG+ +KG+GLVA+PVK GV+TK KLPTNSC ARK
Sbjct: 205 SRQTRIKDQPSHHTEGNNNVTEKGIKHKRKGSGLVAEPVKFGVRTKRLKLPTNSCTVARK 264
Query: 361 SRLNHQVLVSPRLSATSSFSSMDSWVYPKRPRGKGKRANVQINPNAPATLCIDGKESNIY 420
SRLNH VSP+LSA S +CIDGKE+N++
Sbjct: 265 SRLNHLAQVSPQLSAIS-------------------------------IVCIDGKENNVF 293
Query: 421 STRCLEGQ-DVDK 432
S R LE Q DVDK
Sbjct: 294 SPRGLEDQDDVDK 306
>Glyma15g10570.1
Length = 859
Score = 276 bits (707), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 164/217 (75%)
Query: 627 RDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNM 686
+D R RRDM VR+L+S HL++ ++K QKKILAR + +ASS +ATHF+A++F RT+NM
Sbjct: 622 KDSRKRRDMTDVRILYSHHLDEDILKHQKKILARLGVSVASSIADATHFIANQFVRTRNM 681
Query: 687 LEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKPLLK 746
+E +A GK VVTHLW+ESCGQA+CFIDE+NYILRD KKEKE+GFSMP SLARA Q PLLK
Sbjct: 682 VEAIAFGKPVVTHLWIESCGQASCFIDERNYILRDAKKEKELGFSMPVSLARAIQHPLLK 741
Query: 747 GRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCD 806
GRRV +T + KP KE+V+NL AV GQV+++ SCE+DYA C
Sbjct: 742 GRRVLVTTNTKPSKEIVSNLARAVQGQVVEKVGRSVFKGNTIADNLLILSCEEDYASCVP 801
Query: 807 FLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRR 843
FL++G VYSSEL+LNGIV QKLE++RH+LF + V++
Sbjct: 802 FLEKGAMVYSSELLLNGIVTQKLEYQRHRLFADNVKK 838
>Glyma13g28520.1
Length = 518
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 164/217 (75%)
Query: 627 RDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNM 686
+D R RRDM VR+L+S HL++ ++K QKKILAR + +ASS +ATHF+A++F RT+NM
Sbjct: 281 KDSRKRRDMTDVRILYSHHLDEDIVKHQKKILARLGVSVASSIADATHFIANQFVRTRNM 340
Query: 687 LEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKPLLK 746
LE +A GK VVTHLW+ESCGQA+CFIDE+NYILRD+KKEKE+GFSMP SLA A Q PLLK
Sbjct: 341 LEAIAFGKPVVTHLWIESCGQASCFIDERNYILRDVKKEKELGFSMPVSLAHAIQHPLLK 400
Query: 747 GRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCD 806
GRRV +T + KP KE+V+NL AV GQV+++ SCE+DYA C
Sbjct: 401 GRRVLVTTNTKPSKEIVSNLTRAVQGQVVEKVGRSVFKGDTISDDLLILSCEEDYASCVP 460
Query: 807 FLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRR 843
FL++G VYSSEL+LNGIV QKLE++RH+LF + V++
Sbjct: 461 FLEKGAMVYSSELLLNGIVTQKLEYQRHRLFADIVKK 497
>Glyma13g28550.2
Length = 972
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 164/217 (75%)
Query: 627 RDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNM 686
+D R RRDM VR+L+S HL++ ++K QKKILAR + +ASS +ATHF+A++F RT+NM
Sbjct: 735 KDSRKRRDMTDVRILYSHHLDEDIVKHQKKILARLGVSVASSIADATHFIANQFVRTRNM 794
Query: 687 LEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKPLLK 746
LE +A GK VVTHLW+ESCGQA+CFIDE+NYILRD+KKEKE+GFSMP SLA A Q PLLK
Sbjct: 795 LEAIAFGKPVVTHLWIESCGQASCFIDERNYILRDVKKEKELGFSMPVSLAHAIQHPLLK 854
Query: 747 GRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCD 806
GRRV +T + KP KE+V+NL AV GQV+++ SCE+DYA C
Sbjct: 855 GRRVLVTTNTKPSKEIVSNLTRAVQGQVVEKVGRSVFKGDTISDDLLILSCEEDYASCVP 914
Query: 807 FLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRR 843
FL++G VYSSEL+LNGIV QKLE++RH+LF + V++
Sbjct: 915 FLEKGAMVYSSELLLNGIVTQKLEYQRHRLFADIVKK 951
>Glyma13g28550.1
Length = 986
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 141/193 (73%)
Query: 627 RDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNM 686
+D R RRDM VR+L+S HL++ ++K QKKILAR + +ASS +ATHF+A++F RT+NM
Sbjct: 735 KDSRKRRDMTDVRILYSHHLDEDIVKHQKKILARLGVSVASSIADATHFIANQFVRTRNM 794
Query: 687 LEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKPLLK 746
LE +A GK VVTHLW+ESCGQA+CFIDE+NYILRD+KKEKE+GFSMP SLA A Q PLLK
Sbjct: 795 LEAIAFGKPVVTHLWIESCGQASCFIDERNYILRDVKKEKELGFSMPVSLAHAIQHPLLK 854
Query: 747 GRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCD 806
GRRV +T + KP KE+V+NL AV GQV+++ SCE+DYA C
Sbjct: 855 GRRVLVTTNTKPSKEIVSNLTRAVQGQVVEKVGRSVFKGDTISDDLLILSCEEDYASCVP 914
Query: 807 FLKRGTAVYSSEL 819
FL++G ++ S L
Sbjct: 915 FLEKGQKLFHSAL 927
>Glyma19g31520.1
Length = 480
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 639 RVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNMLEVMALGKIVVT 698
R++ +D+ + K++ I+ TH V K RT N + G V++
Sbjct: 283 RIMLMNIADDAKKTQLTKVIEDLGGTISHDGSMTTHVVTGKVRRTLNFCTALCSGAWVIS 342
Query: 699 HLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKP--LLKGRRVYITPHI 756
WL+ + F+DE +IL D + + +++ R++ P L KG + I H+
Sbjct: 343 SSWLKESFREGRFVDELPHILNDTDYLLKYKSDLKSAILRSKVSPHALFKGYNICIAAHV 402
Query: 757 KPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCDFLKRGTAVYS 816
+ K +++ +V + G V I G +CE+D ++G +S
Sbjct: 403 QTPK-ILSAIVRSAGGNV-----ISGLEKVNETSTKIFVACEEDTEEAMIAAQKGIWTFS 456
Query: 817 SELVLNGIVVQKLEFE 832
SE +N ++ Q+L+ E
Sbjct: 457 SEWFMNCVMRQELDLE 472
>Glyma03g28780.1
Length = 579
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
Query: 639 RVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNMLEVMALGKIVVT 698
R++ +D+ + K++ I+ TH V K +T N + G V++
Sbjct: 382 RIMLMNIADDAKKTQLTKVIEDLGGSISHDGSMTTHVVTGKVRKTLNFCTALCSGAWVIS 441
Query: 699 HLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKP--LLKGRRVYITPHI 756
WL+ + F+DE +IL D + + ++ RA+ P L KG + I H+
Sbjct: 442 SSWLKESYRQGRFVDELPHILNDTDYLLKYKSDLKNAVLRAKASPDALFKGYNICIAAHV 501
Query: 757 KPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICCDFLKRGTAVYS 816
+ K + + +V + G V I G +CE+D ++G +S
Sbjct: 502 QTPKTL-SAIVRSAGGNV-----ISGLETVNETSTTIFVACEEDTEEAMIAAQKGIWTFS 555
Query: 817 SELVLNGIVVQKLEFERHKL 836
SE +N ++ Q+L+ E +
Sbjct: 556 SEWFMNCVMRQELDLEASQF 575