Miyakogusa Predicted Gene

Lj1g3v4763870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763870.1 Non Chatacterized Hit- tr|B8AWC4|B8AWC4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,47.42,0.00000000000002,TRAF domain-like,TRAF-like; seg,NULL;
ZF_TRAF,Zinc finger, TRAF-type; TNF RECEPTOR ASSOCIATED
FACTOR,CUFF.33167.1
         (540 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g39140.1                                                       744   0.0  
Glyma02g26780.1                                                       547   e-155
Glyma03g36480.1                                                       222   8e-58

>Glyma19g39140.1 
          Length = 520

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/521 (71%), Positives = 429/521 (82%), Gaps = 29/521 (5%)

Query: 1   MSISSSMDLPTIDVDLGPRKIEDEREGGPLFHCDLCDTEVVHKLAQMFLPGLASACVDNT 60
           MSI SSMD+PTIDVDLGP K+EDE++GGPL HCDLCDTEVVHKLAQMFLPGLASACVDNT
Sbjct: 1   MSILSSMDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNT 60

Query: 61  SGDLFKTPGLVANDLRKEMIDYLTLRSESFVAESVILEGGPDGEESDHPFDIISNFVDDF 120
           SGDLFKTPG VA DLRKEMI+Y+T RSESFVAESVILEGGPDGEESDHPFDIIS+FVDDF
Sbjct: 61  SGDLFKTPGSVAVDLRKEMIEYVTQRSESFVAESVILEGGPDGEESDHPFDIISDFVDDF 120

Query: 121 VSLKRNLFSRVSGWLLSEKREDKIDDFVQEMEMKGFWTLDRRETIAETLLKNVDFENSFH 180
           VS KRNLFSRVSGWLLSEKRED+IDDFVQEMEM GFWTLDRRETIAETLLKNVDFENS+H
Sbjct: 121 VSSKRNLFSRVSGWLLSEKREDRIDDFVQEMEMNGFWTLDRRETIAETLLKNVDFENSYH 180

Query: 181 CSMNFNSKEELASHVTGCNFRTMICQNEGCNSRFCAGHLKKHDSTCPFKIIQCEQKCSDN 240
           C+M+FNS EEL +HV  CNFRTMIC+NEGCNSRFCA HLK HDSTCPFKII CEQKCSD 
Sbjct: 181 CNMSFNSAEELVNHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCPFKIIPCEQKCSDC 240

Query: 241 IMRRDMDRHCITVCPMKLVNCPFFAVGCRSAVAQCMIEKHFSDDIRSHLWHLLKGIHKEA 300
           IMRR+MDRHCIT+CPMKLVNCPF+ VGCRSAVAQCMIEKH  DD+ SHLWHLLKGI+K+A
Sbjct: 241 IMRREMDRHCITICPMKLVNCPFYVVGCRSAVAQCMIEKHRLDDVHSHLWHLLKGIYKQA 300

Query: 301 SGEDLKRRVDQIVEASSSSQLAKARDVRSLTFVVKDIEAKLGPLEVSVVEKNNAEISPKS 360
            G+DLKRRV+QIV+ASSSS+LA+ARDVRSL F+VKDIEAKLGP +VSV+EKNNAEI  K 
Sbjct: 301 YGDDLKRRVEQIVQASSSSRLAEARDVRSLNFIVKDIEAKLGPFKVSVLEKNNAEIVTK- 359

Query: 361 DDDGEDSDTNTNVTEQSTQASHITNSSDTAQGSDIVNTHNAENTTKNEDSEHRRVENKSN 420
           +D+GE  D     TE+S +AS + NS D A+ SD+ N +NA++TTKNED E   VENK  
Sbjct: 360 NDEGEAGD-----TEKSMKASDMVNSPDKAELSDMKNMNNAKSTTKNEDREPVPVENKGC 414

Query: 421 EEKTQTSN--ELPDKVKNDVVKEDSAEIYKDIKDVAASELKTAGNEENTMDN----SSEK 474
           EE  QTSN   L DK +  +  +++       KD AASELK  G+EE+T  +    S+E+
Sbjct: 415 EEMAQTSNTTNLSDKTEVGLPNDEN-------KDAAASELKIKGDEEHTQTHKEKLSNEE 467

Query: 475 IRVTDDDSPKNSIKNRSIEGSNFKDKDNEQSIQDMKIETQG 515
           +   D+ S +N IK+          K NEQSIQ+ K+ET+G
Sbjct: 468 VSAPDEGSAENIIKS----------KYNEQSIQNSKMETKG 498


>Glyma02g26780.1 
          Length = 401

 Score =  547 bits (1410), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/414 (65%), Positives = 322/414 (77%), Gaps = 20/414 (4%)

Query: 1   MSISSSMDLPTIDVDLGPRKIEDEREGGPLFHCDLCDTEVVHKLAQMFLPGLASACVDNT 60
           MS+  SM+LPT DVDL P+KIE E+  GPLFHCD CDTEVVHKLAQMFLPGLA A     
Sbjct: 1   MSVLPSMELPTTDVDLEPKKIEPEKNEGPLFHCDFCDTEVVHKLAQMFLPGLACA----- 55

Query: 61  SGDLFKTPGLVANDLRKEMIDYLTLRSESFVAESVILEGGPDGEESDHPFDIISNFVDDF 120
                     +A DLRKEMI+++T +SESFVAESVILEGGPDG   +HPFDII  FVD+F
Sbjct: 56  ----------LAVDLRKEMIEFVTQKSESFVAESVILEGGPDGGALEHPFDIICYFVDEF 105

Query: 121 VSLKRNLFSRVSGWLLSEKREDKIDDFVQEMEMKGFWTLDRRETIAETLLKNVDFENSFH 180
           VS KRNL S+VSGWLLS+KREDKIDDFVQEMEM GFW LDRRET+A+TL+KNVD ++SFH
Sbjct: 106 VSSKRNLLSQVSGWLLSDKREDKIDDFVQEMEMNGFWPLDRRETLAKTLIKNVDVKSSFH 165

Query: 181 CSMNFNSKEELASHVT-GCNFRTMICQNEGCNSRFCAGHLKKHDSTCPFKIIQCEQKCSD 239
           CSM+F S  +LA+H   GCNFR +IC+NEGC++RF AGHLK+HDS C FKI+ CEQKC+D
Sbjct: 166 CSMSFKSARDLANHADDGCNFRPVICRNEGCDARFSAGHLKEHDSACDFKIVPCEQKCTD 225

Query: 240 NIMRRDMDRHCITVCPMKLVNCPFFAVGCRSAVAQCMIEKHFSDDIRSHLWHLLKGIHKE 299
           +I+RR+MDRHCITVCPMKLVNCPF+AVGCRSA+AQ MI KH SDDI SHL  +LKGIH+E
Sbjct: 226 SILRREMDRHCITVCPMKLVNCPFYAVGCRSAIAQSMIRKHCSDDIESHLLLMLKGIHQE 285

Query: 300 ASGEDLKRRVDQIVEASSSSQLAKARDVRSLTFVVKDIEAKLGPLEVSVVEKNNAEISPK 359
           ASGEDLKRRV+QI++ASS S+LA+ARDVRS   +VKD+E KLGPLEV   EK +AE +  
Sbjct: 286 ASGEDLKRRVEQILQASSRSKLAEARDVRSYKNIVKDLEVKLGPLEVIAKEKTSAE-TVA 344

Query: 360 SDDDGEDSDTNTNVTEQSTQASHITNSSDTAQGSDIVNTHNAENTTKNEDSEHR 413
            ++D ED+ T T   EQ TQ     NS D A+ S I+    A N     DSEH+
Sbjct: 345 ENEDSEDNRTKTKDKEQHTQT---LNSLDKAEVSAILEKTCAGNAVNKVDSEHK 395


>Glyma03g36480.1 
          Length = 614

 Score =  222 bits (566), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 100/115 (86%), Positives = 107/115 (93%)

Query: 7   MDLPTIDVDLGPRKIEDEREGGPLFHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK 66
           MD+PTIDVDLGP K+EDE++GGPL HCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK
Sbjct: 1   MDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK 60

Query: 67  TPGLVANDLRKEMIDYLTLRSESFVAESVILEGGPDGEESDHPFDIISNFVDDFV 121
           TPG VA DLRKEMI+Y+T RSESFVAESVILEG PDGE SDHPFDIISN VDDF+
Sbjct: 61  TPGSVAVDLRKEMIEYVTQRSESFVAESVILEGSPDGEVSDHPFDIISNLVDDFI 115



 Score =  153 bits (386), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/303 (40%), Positives = 166/303 (54%), Gaps = 62/303 (20%)

Query: 243 RRDMDRHCITVCPMKLVNCP--FFAVGCRSAV---AQCMIEKHFSDDIRSHLWHLLKGIH 297
           RRD + H  T CP+ L+  P  F ++  R+ +   AQC  E+ + +              
Sbjct: 337 RRDSNSHA-TFCPI-LICLPNTFPSIATRTFLLEKAQCS-ERCYPN-------------- 379

Query: 298 KEASGEDLKRRVDQI---VEASSSSQLAKARDVRSLTFVVKDIEAKLGPLEVSVVEKNNA 354
           +E  G +    VD +   ++ASSSS+LA+ARDVRSL F+VKDIEAKLGP +VS VEKNN 
Sbjct: 380 QEFEGMNFYPGVDWLNSCLQASSSSRLAEARDVRSLNFIVKDIEAKLGPFKVSAVEKNNG 439

Query: 355 EISPKSDDDGEDSDTNTNVTEQSTQASHITNSSDTAQGSDIVNTHNAENTTKNEDSEHRR 414
           E   K +  GE  +T+ N  E+S +AS + NS D A+ S +VN +NAENTTKNED E   
Sbjct: 440 ETVTK-NGQGEGGETDMNGREKSMKASDMVNSPDKAELSGMVNMNNAENTTKNEDRESVP 498

Query: 415 VENKSNEEKTQTSN--ELPDKVKNDVVKEDSAEIYKDIKDVAASELKTAGNEENTMDN-- 470
           +ENK  EE  QTSN   L DK +  +  +       +IKD A SELK  GNEE+T     
Sbjct: 499 LENKGFEEIAQTSNMTNLSDKTEVGLPND-------EIKDDADSELKIKGNEESTQTQKE 551

Query: 471 -------------------------SSEKIRVTDDDSPKNSIKNRSIEGSNFKDKDNEQS 505
                                    S+EK+  T++ S +NSIK+   E + F+ KDNEQS
Sbjct: 552 KLSNEEVSATDKGNEESTQTHKEKLSNEKVSATNEGSAENSIKSNYNEDNKFEVKDNEQS 611

Query: 506 IQD 508
           IQ+
Sbjct: 612 IQN 614