Miyakogusa Predicted Gene

Lj1g3v4763560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763560.1 Non Chatacterized Hit- tr|I1I6S1|I1I6S1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.15,3e-17,SAM_2,Sterile alpha motif, type 2; no
description,Sterile alpha motif/pointed domain;
SAM_DOMAIN,Ste,CUFF.33147.1
         (258 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g36400.1                                                       352   2e-97
Glyma19g39050.1                                                       342   2e-94
Glyma08g28950.1                                                        52   5e-07
Glyma04g37670.1                                                        52   6e-07
Glyma18g51850.1                                                        52   8e-07
Glyma05g38440.1                                                        51   1e-06

>Glyma03g36400.1 
          Length = 261

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 181/263 (68%), Positives = 212/263 (80%), Gaps = 7/263 (2%)

Query: 1   MVKPKKRDTGKVPGKKSGTA-HRLNDTPGLENQHEDGDWVIVKKQRVTILVSAAPRGE-- 57
           MVK K++ TGKVPGKKSGT+ H L ++   +NQHED DW+IVKKQRVTILV AAP  E  
Sbjct: 1   MVKTKQKRTGKVPGKKSGTSSHCLVNSGNGDNQHEDSDWIIVKKQRVTILVPAAPLNERS 60

Query: 58  --GDQEPSHVHPMPPGTLSSNRVELPMETSTLNPSGSEHEKTILPAAEEETRAVGRASPP 115
              +Q P+H+H MPP  ++SN V+LPMETST++PSG+EHEK  L A  +ETRA  RA P 
Sbjct: 61  LTANQGPNHMHLMPP-EIASNHVQLPMETSTMHPSGNEHEKATL-ALRKETRAERRAPPT 118

Query: 116 LPKSPLANSPWVDQRIEPENPHQVSTLKSHELLGVSNASKAIRQPRTLLAPRMSSNLVTL 175
           LPK  + N P +D+ IE ENPHQ ++LKSH+LLG+S+ SK I+QPRTLLAPR SSNL TL
Sbjct: 119 LPKPTVVNPPSLDEIIESENPHQTNSLKSHKLLGISDTSKVIKQPRTLLAPRRSSNLETL 178

Query: 176 SHGLRASNLTRKLERAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASA 235
           +  LRASNL RKLERAGGLS+WLTSLGL QFVRIFQG  +SKY L NLTM+KLKDMGASA
Sbjct: 179 NKSLRASNLERKLERAGGLSKWLTSLGLAQFVRIFQGNSLSKYQLVNLTMKKLKDMGASA 238

Query: 236 VGPRRKLIHAIDCVCQPYCFEAL 258
           VGPRRKLIHA+DCVCQPYCFEAL
Sbjct: 239 VGPRRKLIHAMDCVCQPYCFEAL 261


>Glyma19g39050.1 
          Length = 262

 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/263 (66%), Positives = 208/263 (79%), Gaps = 6/263 (2%)

Query: 1   MVKPKKRDTGKVPGKKSGTA-HRLNDTPGLENQHEDGDWVIVKKQRVTILVSAAPRGE-- 57
           MVK K++ TG+VPGKKSGT+ H L D+   +NQHED DW+IVKKQRVTILV AAP  +  
Sbjct: 1   MVKTKQKRTGEVPGKKSGTSSHCLVDSGDGDNQHEDSDWIIVKKQRVTILVPAAPLNDRS 60

Query: 58  --GDQEPSHVHPMPPGTLSSNRVELPMETSTLNPSGSEHEKTILPAAEEETRAVGRASPP 115
              +Q P+H+H MPP  ++SN V+LPM+TST++PSG EHEK  L A ++ET A  +A   
Sbjct: 61  LIANQGPNHMHLMPP-EIASNHVQLPMQTSTVHPSGKEHEKATLLAVQKETHAERKALLT 119

Query: 116 LPKSPLANSPWVDQRIEPENPHQVSTLKSHELLGVSNASKAIRQPRTLLAPRMSSNLVTL 175
           LPKS + N P +DQRIE ENP  +++LK H+LLGVS+ASK I+QPRTLLAPR S N  TL
Sbjct: 120 LPKSTVVNPPSLDQRIESENPQAMNSLKLHKLLGVSDASKVIKQPRTLLAPRRSFNQETL 179

Query: 176 SHGLRASNLTRKLERAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASA 235
           +  LRASNL RKLERAGGLS WLTSLGL QFVRIFQG  +SKY L NLTM+KLKDMGASA
Sbjct: 180 NKNLRASNLERKLERAGGLSNWLTSLGLGQFVRIFQGNSLSKYQLVNLTMKKLKDMGASA 239

Query: 236 VGPRRKLIHAIDCVCQPYCFEAL 258
           VGPRRKLIHA+DCVCQPYCFEAL
Sbjct: 240 VGPRRKLIHAMDCVCQPYCFEAL 262


>Glyma08g28950.1 
          Length = 263

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 185 TRKLERAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASAVGPRRKLIH 244
           +R+  ++ G+  WL  LGL ++  +F+   V    L  LT++ LKDMG +AVG RRK+  
Sbjct: 194 SRERRKSDGVRSWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYT 253

Query: 245 AI 246
           AI
Sbjct: 254 AI 255


>Glyma04g37670.1 
          Length = 254

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query: 190 RAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASAVGPRRKLIHAI 246
           R  G+  WL  LGL ++  +F+   V    L  LT++ LKDMG SAVG RRK+  AI
Sbjct: 192 RGDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAI 248


>Glyma18g51850.1 
          Length = 246

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 173 VTLSHGLRASNLTRKLERAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMG 232
           V+ + G+ + +  R+  ++ G+  WL  LGL ++  +F+   V    L  LT++ LKDMG
Sbjct: 167 VSENDGVESESQERR--KSDGVRSWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMG 224

Query: 233 ASAVGPRRKLIHAIDCV--CQP 252
            +AVG RRK+  AI  +  C P
Sbjct: 225 INAVGSRRKMYTAIQKLRKCLP 246


>Glyma05g38440.1 
          Length = 276

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 193 GLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASAVGPRRKLIHAIDCVCQP 252
           G+  WL  LGL ++  +F+   V    L  LT++ LKDMG SAVG RRK+  AI  + + 
Sbjct: 215 GVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKG 274

Query: 253 YC 254
           + 
Sbjct: 275 FS 276