Miyakogusa Predicted Gene

Lj1g3v4730390.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4730390.1 Non Chatacterized Hit- tr|I0YUZ3|I0YUZ3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,45.71,0.000003,UNKNOWN PROTEIN,NULL; 34 KDA TRANSCRIPTIONAL
CO-ACTIVATOR-RELATED,NULL; seg,NULL; Med27,Mediator com,CUFF.33060.1
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g03150.1                                                       552   e-157
Glyma03g36030.3                                                       549   e-156
Glyma03g36030.2                                                       549   e-156
Glyma03g36030.1                                                       549   e-156
Glyma17g25960.1                                                       137   1e-32
Glyma17g25970.1                                                        96   6e-20
Glyma05g25170.1                                                        81   1e-15
Glyma14g12460.1                                                        73   5e-13

>Glyma19g03150.1 
          Length = 420

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 266/317 (83%), Positives = 280/317 (88%)

Query: 1   MEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 60
           +EESGVL ESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT
Sbjct: 104 LEESGVLSESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 163

Query: 61  DQKRRFFPHLDDGLETNESASKKFRGSEEVTVDTKEEVSFFRTVQDVLKSLEKDVPNVKI 120
           DQKRRFFPHLDDGLET+ESASKK  GSEE+ VD KE +SF RT+ DVLKSLEKDVPN+KI
Sbjct: 164 DQKRRFFPHLDDGLETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKI 223

Query: 121 STFERLDWLKRAXXXXXXXXXXXXXHNYPGSSKLRLGSVGTVAAEKVAVIELLFPSIFRA 180
            TFERLDWLKRA             HNY GS+KLRLGSVGTV AEKVAVIELLFP +FRA
Sbjct: 224 LTFERLDWLKRASTLTSSTNENSLEHNYHGSNKLRLGSVGTVPAEKVAVIELLFPCVFRA 283

Query: 181 VISLHPAGSIDPDAVAFFAPDESGSYVHARGFSVHHVNRHITDYAAVALQYFLGNQPETS 240
           VISLHPAGS+DPDAVAFFAPDESGSYVHARGFSVHHV RHIT+YAA ALQYFLGNQ ET 
Sbjct: 284 VISLHPAGSMDPDAVAFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETC 343

Query: 241 LYSLLHWISSYQTLFSRPCSKCSKLLAMDKQTNLLLPPVHRPYWKFSFSKILSNISLKDQ 300
           LY LLHWI SYQTLFSRPCSKCS+LLAMDKQ+ LLLPPVHRPYW+FSFSKIL NIS KDQ
Sbjct: 344 LYFLLHWICSYQTLFSRPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQ 403

Query: 301 NSDTTQAYHTGCLTEEV 317
           NSDTTQAYH  CL+EE 
Sbjct: 404 NSDTTQAYHIDCLSEET 420


>Glyma03g36030.3 
          Length = 425

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/317 (83%), Positives = 279/317 (88%)

Query: 1   MEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 60
           +EESGVL ESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT
Sbjct: 109 LEESGVLSESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 168

Query: 61  DQKRRFFPHLDDGLETNESASKKFRGSEEVTVDTKEEVSFFRTVQDVLKSLEKDVPNVKI 120
           DQKRRFFPHLDDGLET+ESASKK  GSEE+ VD KE +SF RT+ DVLKSLEKDVPN+KI
Sbjct: 169 DQKRRFFPHLDDGLETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKI 228

Query: 121 STFERLDWLKRAXXXXXXXXXXXXXHNYPGSSKLRLGSVGTVAAEKVAVIELLFPSIFRA 180
            TFERLDWLKRA             HNY GS+KLRLGSVGTV AEKVAVIELLFP +FRA
Sbjct: 229 LTFERLDWLKRASTLTLSTNENYLEHNYHGSNKLRLGSVGTVPAEKVAVIELLFPCVFRA 288

Query: 181 VISLHPAGSIDPDAVAFFAPDESGSYVHARGFSVHHVNRHITDYAAVALQYFLGNQPETS 240
           VISLHPAGS+DPD VAFFAPDESGSYVHARGFSVHHV RHIT+YAA ALQYFLGNQ ET 
Sbjct: 289 VISLHPAGSMDPDVVAFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETC 348

Query: 241 LYSLLHWISSYQTLFSRPCSKCSKLLAMDKQTNLLLPPVHRPYWKFSFSKILSNISLKDQ 300
           LY LLHWI SYQTLFS+PCSKCS+LLAMDKQ+ LLLPPVHRPYW+FSFSKIL NIS KDQ
Sbjct: 349 LYFLLHWICSYQTLFSKPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQ 408

Query: 301 NSDTTQAYHTGCLTEEV 317
           NSDTTQAYH  CL+EE 
Sbjct: 409 NSDTTQAYHIDCLSEET 425


>Glyma03g36030.2 
          Length = 425

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/317 (83%), Positives = 279/317 (88%)

Query: 1   MEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 60
           +EESGVL ESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT
Sbjct: 109 LEESGVLSESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 168

Query: 61  DQKRRFFPHLDDGLETNESASKKFRGSEEVTVDTKEEVSFFRTVQDVLKSLEKDVPNVKI 120
           DQKRRFFPHLDDGLET+ESASKK  GSEE+ VD KE +SF RT+ DVLKSLEKDVPN+KI
Sbjct: 169 DQKRRFFPHLDDGLETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKI 228

Query: 121 STFERLDWLKRAXXXXXXXXXXXXXHNYPGSSKLRLGSVGTVAAEKVAVIELLFPSIFRA 180
            TFERLDWLKRA             HNY GS+KLRLGSVGTV AEKVAVIELLFP +FRA
Sbjct: 229 LTFERLDWLKRASTLTLSTNENYLEHNYHGSNKLRLGSVGTVPAEKVAVIELLFPCVFRA 288

Query: 181 VISLHPAGSIDPDAVAFFAPDESGSYVHARGFSVHHVNRHITDYAAVALQYFLGNQPETS 240
           VISLHPAGS+DPD VAFFAPDESGSYVHARGFSVHHV RHIT+YAA ALQYFLGNQ ET 
Sbjct: 289 VISLHPAGSMDPDVVAFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETC 348

Query: 241 LYSLLHWISSYQTLFSRPCSKCSKLLAMDKQTNLLLPPVHRPYWKFSFSKILSNISLKDQ 300
           LY LLHWI SYQTLFS+PCSKCS+LLAMDKQ+ LLLPPVHRPYW+FSFSKIL NIS KDQ
Sbjct: 349 LYFLLHWICSYQTLFSKPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQ 408

Query: 301 NSDTTQAYHTGCLTEEV 317
           NSDTTQAYH  CL+EE 
Sbjct: 409 NSDTTQAYHIDCLSEET 425


>Glyma03g36030.1 
          Length = 425

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/317 (83%), Positives = 279/317 (88%)

Query: 1   MEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 60
           +EESGVL ESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT
Sbjct: 109 LEESGVLSESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFT 168

Query: 61  DQKRRFFPHLDDGLETNESASKKFRGSEEVTVDTKEEVSFFRTVQDVLKSLEKDVPNVKI 120
           DQKRRFFPHLDDGLET+ESASKK  GSEE+ VD KE +SF RT+ DVLKSLEKDVPN+KI
Sbjct: 169 DQKRRFFPHLDDGLETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKI 228

Query: 121 STFERLDWLKRAXXXXXXXXXXXXXHNYPGSSKLRLGSVGTVAAEKVAVIELLFPSIFRA 180
            TFERLDWLKRA             HNY GS+KLRLGSVGTV AEKVAVIELLFP +FRA
Sbjct: 229 LTFERLDWLKRASTLTLSTNENYLEHNYHGSNKLRLGSVGTVPAEKVAVIELLFPCVFRA 288

Query: 181 VISLHPAGSIDPDAVAFFAPDESGSYVHARGFSVHHVNRHITDYAAVALQYFLGNQPETS 240
           VISLHPAGS+DPD VAFFAPDESGSYVHARGFSVHHV RHIT+YAA ALQYFLGNQ ET 
Sbjct: 289 VISLHPAGSMDPDVVAFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETC 348

Query: 241 LYSLLHWISSYQTLFSRPCSKCSKLLAMDKQTNLLLPPVHRPYWKFSFSKILSNISLKDQ 300
           LY LLHWI SYQTLFS+PCSKCS+LLAMDKQ+ LLLPPVHRPYW+FSFSKIL NIS KDQ
Sbjct: 349 LYFLLHWICSYQTLFSKPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQ 408

Query: 301 NSDTTQAYHTGCLTEEV 317
           NSDTTQAYH  CL+EE 
Sbjct: 409 NSDTTQAYHIDCLSEET 425


>Glyma17g25960.1 
          Length = 92

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 74/92 (80%)

Query: 103 TVQDVLKSLEKDVPNVKISTFERLDWLKRAXXXXXXXXXXXXXHNYPGSSKLRLGSVGTV 162
           T+ DVLKSLEKDVPN+KI TFERLDWLKRA             HNY GS+KLRLGSVGTV
Sbjct: 1   TLPDVLKSLEKDVPNLKILTFERLDWLKRASTLTSSTNESSLEHNYHGSNKLRLGSVGTV 60

Query: 163 AAEKVAVIELLFPSIFRAVISLHPAGSIDPDA 194
           AAEKVA+IELLFPSIFRAV+S HP GS+DPDA
Sbjct: 61  AAEKVAMIELLFPSIFRAVLSWHPVGSMDPDA 92


>Glyma17g25970.1 
          Length = 173

 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 49/68 (72%), Gaps = 16/68 (23%)

Query: 16  DFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLE 75
           DF GLHMPLVCPDGAV+AYAWK                LALKAFTDQKR FFPHLDDGLE
Sbjct: 60  DFCGLHMPLVCPDGAVIAYAWK----------------LALKAFTDQKRHFFPHLDDGLE 103

Query: 76  TNESASKK 83
           T+ES SKK
Sbjct: 104 TSESTSKK 111


>Glyma05g25170.1 
          Length = 40

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/40 (82%), Positives = 34/40 (85%)

Query: 17 FWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLAL 56
          FWGLHMPLVCPDG VVAYAWKRQL GQ GAS +DRTR  L
Sbjct: 1  FWGLHMPLVCPDGTVVAYAWKRQLTGQVGASTIDRTRFNL 40


>Glyma14g12460.1 
          Length = 107

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 1  MEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAW 36
          +EESGVL E VR RKDFWGLH PLVCPDGAVVAYAW
Sbjct: 61 LEESGVLSELVRLRKDFWGLHKPLVCPDGAVVAYAW 96