Miyakogusa Predicted Gene

Lj1g3v4719680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4719680.1 tr|B9HBX0|B9HBX0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561466 PE=4 SV=1,42.47,1e-16,PH
domain-like,NULL; SUBFAMILY NOT NAMED,NULL; TRANSCRIPTION FACTOR SMIF
(DECAPPING ENZYME DCP1),Dcp,CUFF.33043.1
         (356 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g38280.1                                                       389   e-108
Glyma03g35640.1                                                       374   e-104
Glyma12g31190.2                                                       275   4e-74
Glyma13g39120.1                                                       273   2e-73
Glyma12g31190.1                                                       236   2e-62

>Glyma19g38280.1 
          Length = 359

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/364 (61%), Positives = 251/364 (68%), Gaps = 13/364 (3%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ KKLTPNLD+QSTKVLNLTVL+R+DPFI+EILFTAAHVS YDFNIESNQWSRK+VEG
Sbjct: 1   MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIEEILFTAAHVSFYDFNIESNQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLLDFEYELKKPYLLYRNAKQEVNGIWFYN 119
           SLFVV+RN Q  P FQFIVMNRRNTDNL ENLLDFEYELKKPYLLYRNA QEVNGIWFYN
Sbjct: 61  SLFVVKRNSQ--PRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYN 118

Query: 120 PDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSII-RXXXXXXXXXXXXXNT 178
           PDECEEV NLFNRI++ YPK  P+T++P + SE EEL+PVSII               + 
Sbjct: 119 PDECEEVANLFNRILNAYPKTAPTTVLPVNISESEELQPVSIIPESPLESSSATASAIDA 178

Query: 179 PEDYVFINSLNASKVTGNYASSVESFGRPYHSATVTSTVPNGLFTPAPSVQIPXXXXXXX 238
            ED    N L+  KVTGNYAS++E+F +  HSATVTS  P+GLF+ AP+VQIP       
Sbjct: 179 VEDPANTNFLSTLKVTGNYASNMENFRQ--HSATVTS-APSGLFSTAPAVQIPSASHSTS 235

Query: 239 XX------XXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHPLILPN 292
                     ET   GNQ+  LV PSTF A               V P+AAV H L LP 
Sbjct: 236 SISGFPLDSLETAKSGNQIINLVKPSTFFASTSSSSLLVPPISSSVQPSAAVQHSLNLPR 295

Query: 293 QYGTPVFQHFXXXXXXXXXXXXXXXXXXRPVISRDKVRDALLSLVQDDQFIDMVFQKLLK 352
           QYGTPV Q F                  RPV SRD VRDALLSLVQ+DQFIDM+FQ LLK
Sbjct: 296 QYGTPVLQPFPPPNPPLSLTPISSSTPNRPVFSRDNVRDALLSLVQEDQFIDMMFQALLK 355

Query: 353 VNLS 356
           V+ S
Sbjct: 356 VSHS 359


>Glyma03g35640.1 
          Length = 359

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/364 (62%), Positives = 250/364 (68%), Gaps = 13/364 (3%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ KKLTPNLD+QSTKVLNLTVL+R+DP+IDEILFTAAHVS YDFNIESNQWSRK+VEG
Sbjct: 1   MSQTKKLTPNLDQQSTKVLNLTVLQRIDPYIDEILFTAAHVSFYDFNIESNQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLLDFEYELKKPYLLYRNAKQEVNGIWFYN 119
           SLFVV+RN Q  P FQFIVMNRRNTDNL ENLLDFEYELKKPYLLYRNA QEVNGIWFYN
Sbjct: 61  SLFVVKRNSQ--PRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYN 118

Query: 120 PDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSII-RXXXXXXXXXXXXXNT 178
           PDECEEV NLFNRI++ YPK PP+TI P + SE EEL+PVSII               + 
Sbjct: 119 PDECEEVANLFNRILNAYPKTPPTTIPPVNISESEELQPVSIIPESPLESSSVAASAIDA 178

Query: 179 PEDYVFINSLNASKVTGNYASSVESFGRPYHSATVTSTVPNGLFTPAPSVQIPXXXXXXX 238
            ED  F N  +  KVTGNYAS++E+F +  HSATVTS  P GL + AP+VQIP       
Sbjct: 179 VEDPAFTNFFSTLKVTGNYASNMENFRQ--HSATVTSA-PGGLLSTAPTVQIPSASHSTS 235

Query: 239 XX------XXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHPLILPN 292
                     ET   GNQV  LV PSTF A               VPP+A VHH L +P 
Sbjct: 236 SISGFPLDSLETAKSGNQVINLVKPSTFFASTSSSSLLVPPIYSSVPPSAVVHHSLNVPR 295

Query: 293 QYGTPVFQHFXXXXXXXXXXXXXXXXXXRPVISRDKVRDALLSLVQDDQFIDMVFQKLLK 352
           QYGTPV Q F                  RPVISRD VRDALLSLVQ+D FIDM+FQ LLK
Sbjct: 296 QYGTPVLQPFPPPNPPLSLTPISSSTPNRPVISRDNVRDALLSLVQEDHFIDMMFQALLK 355

Query: 353 VNLS 356
           V+ S
Sbjct: 356 VSHS 359


>Glyma12g31190.2 
          Length = 366

 Score =  275 bits (704), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 176/371 (47%), Positives = 222/371 (59%), Gaps = 20/371 (5%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ  KL PNLD+ STK+LNLTVL+R+DPF++EIL TAAHV+ Y+FNI+ +QWSRK+VEG
Sbjct: 1   MSQNGKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLL-DFEYELKKPYLLYRNAKQEVNGIWFY 118
           SLFVV+RN Q  P FQFIVMNRRNT+NL ENLL DFEYE++ PYLLYRNA QEVNGIWFY
Sbjct: 61  SLFVVKRNTQ--PRFQFIVMNRRNTENLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFY 118

Query: 119 NPDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSIIRXXXX----XXXXXXX 174
           N  ECEEV NLF+RI++ Y K PP + + S+ SEFEELE V  +                
Sbjct: 119 NARECEEVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVIDGPLEPSSSTTSN 178

Query: 175 XXNTPEDYVFINSLNASKVTGNYASSVESFGRPYH--SATVTSTVPNGLFTPA-PSVQIP 231
             + P+D  F+N  +A+   GN  S+    G+P    +   +S+VP    TP  P++QIP
Sbjct: 179 VADVPDDPSFVNFFSAAMAIGN-TSNAPINGQPCQSSATISSSSVPTNAATPTVPTLQIP 237

Query: 232 XXXXXX----XXXXXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHP 287
                          E I+  N+  KLV PS F+                  P+A   HP
Sbjct: 238 TLSASTPLIPQLDAAELISSSNRTAKLVKPSFFVPPPSSAMMIPPVSSST--PSAPPLHP 295

Query: 288 LI-LPNQYGTPVFQHFXXXXXXXXXXXXXXXXXX-RPVISRDKVRDALLSLVQDDQFIDM 345
            + +   YG P+ Q F                    PVISR+KVRDALL LVQD+QFIDM
Sbjct: 296 AVNVQRPYGAPLLQPFPPPNPPPSLAPAPSPSPSYGPVISREKVRDALLVLVQDNQFIDM 355

Query: 346 VFQKLLKVNLS 356
           V++ LL  + S
Sbjct: 356 VYRALLNAHQS 366


>Glyma13g39120.1 
          Length = 368

 Score =  273 bits (698), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 176/373 (47%), Positives = 222/373 (59%), Gaps = 22/373 (5%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ  KL PNLD+ STK+LNLTVL+R+DPF++EIL TAAHV+ Y+FNI+ +QWSRK+VEG
Sbjct: 1   MSQNGKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLL-DFEYELKKPYLLYRNAKQEVNGIWFY 118
           SLFVV+RN Q  P FQFIVMNRRNT+NL ENLL DFEYE++ PYLLYRNA QEVNGIWFY
Sbjct: 61  SLFVVKRNTQ--PRFQFIVMNRRNTENLVENLLGDFEYEVQIPYLLYRNAAQEVNGIWFY 118

Query: 119 NPDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSIIRXXXX----XXXXXXX 174
           N  ECEEV NLF+RI++ Y K PP + + S+ SEFEELE V  +                
Sbjct: 119 NARECEEVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVMDGPLEPSSSTTSN 178

Query: 175 XXNTPEDYVFINSLNASKVTGNYASSVESFGRPYH--SATVTSTVPNGLFTPA-PSVQIP 231
             + P+D  F+N  +A+   GN  S+    G+PY   +A  +S+VP    TP  P++QIP
Sbjct: 179 VADVPDDPSFVNFFSAAMAIGN-TSNTPITGQPYQSSAAISSSSVPTHTATPTVPTLQIP 237

Query: 232 XXXXXXXXX----XXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHP 287
                          E+I   N+  KLV PS F+                  P A   HP
Sbjct: 238 SLSQSTPLIPPLDAVESICSSNRTAKLVKPSFFVPPPSSAMMIPPVSSST--PTAPPLHP 295

Query: 288 LI-LPNQYGTPVFQHFXXXXXXXXXXXXXXXXXXR---PVISRDKVRDALLSLVQDDQFI 343
            + +   YG P+ Q F                       VISR+KVRDAL+ LVQD+QFI
Sbjct: 296 AVNVHRPYGAPLLQPFPPPNPPLSLAPAASPSSSPNYGSVISREKVRDALMVLVQDNQFI 355

Query: 344 DMVFQKLLKVNLS 356
           DMV++ LL  + S
Sbjct: 356 DMVYRALLNAHQS 368


>Glyma12g31190.1 
          Length = 942

 Score =  236 bits (603), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/385 (43%), Positives = 208/385 (54%), Gaps = 52/385 (13%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQW------- 52
           MSQ  KL PNLD+ STK+LNLTVL+R+DPF++EIL TAAHV+ Y+FNI+ +QW       
Sbjct: 1   MSQNGKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWVRFLSIY 60

Query: 53  -------------------------SRKNVEGSLFVVQRNPQVKPEFQFIVMNRRNTDNL 87
                                    SRK+VEGSLFVV+RN Q  P FQFIVMNRRNT+NL
Sbjct: 61  HFFFIHSISIPYQFSSSLSSAIASQSRKDVEGSLFVVKRNTQ--PRFQFIVMNRRNTENL 118

Query: 88  KENLL-DFEYELKKPYLLYRNAKQEVNGIWFYNPDECEEVGNLFNRIIDEYPKAPPSTIM 146
            ENLL DFEYE++ PYLLYRNA QEVNGIWFYN  ECEEV NLF+RI++ Y K PP + +
Sbjct: 119 VENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECEEVANLFSRILNAYAKVPPKSKV 178

Query: 147 PSSNSEFEELEPVSIIRXXXX----XXXXXXXXXNTPEDYVFINSLNASKVTGNYASSVE 202
            S+ SEFEELE V  +                  + P+D  F+N  +A+   GN  S+  
Sbjct: 179 SSTKSEFEELEAVPTMAVIDGPLEPSSSTTSNVADVPDDPSFVNFFSAAMAIGN-TSNAP 237

Query: 203 SFGRPYH--SATVTSTVPNGLFTPA-PSVQIPXXXXXX----XXXXXETINIGNQVTKLV 255
             G+P    +   +S+VP    TP  P++QIP               E I+  N+  KLV
Sbjct: 238 INGQPCQSSATISSSSVPTNAATPTVPTLQIPTLSASTPLIPQLDAAELISSSNRTAKLV 297

Query: 256 NPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHPLI-LPNQYGTPVFQHFXXXXXXXXXXXX 314
            PS F+                  P+A   HP + +   YG P+ Q F            
Sbjct: 298 KPSFFVPPPSSAMMIPPVSSST--PSAPPLHPAVNVQRPYGAPLLQPFPPPNPPPSLAPA 355

Query: 315 XXXXXX-RPVISRDKVRDALLSLVQ 338
                   PVISR+KVRDALL LVQ
Sbjct: 356 PSPSPSYGPVISREKVRDALLVLVQ 380