Miyakogusa Predicted Gene

Lj1g3v4715160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4715160.1 Non Chatacterized Hit- tr|B9SRV7|B9SRV7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,70.67,2e-18,coiled-coil,NULL; seg,NULL,CUFF.32984.1
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g35210.1                                                        72   2e-13
Glyma19g37870.1                                                        72   3e-13
Glyma13g22000.1                                                        61   5e-10
Glyma10g08310.1                                                        60   1e-09

>Glyma03g35210.1 
          Length = 66

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG----NNAPNTTLD 145
           MERLNSELYYQNCH++KENERLRKK               K+K+S G    N APNT LD
Sbjct: 1   MERLNSELYYQNCHMIKENERLRKKAQLLNQENQQLLSELKKKLSKGNAKTNAAPNTILD 60

Query: 146 LNLG 149
           LNLG
Sbjct: 61  LNLG 64


>Glyma19g37870.1 
          Length = 66

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG----NNAPNTTLD 145
           MERLNSELYYQNCHIMKENERLRKK               K+K+S G    N APNT  D
Sbjct: 1   MERLNSELYYQNCHIMKENERLRKKAQLLNQENQQLLSELKKKLSKGNAKTNAAPNTIHD 60

Query: 146 LNLG 149
           LNLG
Sbjct: 61  LNLG 64


>Glyma13g22000.1 
          Length = 77

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 5/65 (7%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNGN---NAPNTT--L 144
           MERLNS+LY QNC+IMKENERLRKK               KQK+S GN   NA NT   L
Sbjct: 1   MERLNSKLYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSRGNQKANASNTNAIL 60

Query: 145 DLNLG 149
           DL+L 
Sbjct: 61  DLSLS 65


>Glyma10g08310.1 
          Length = 78

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 6/63 (9%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG----NNA--PNTT 143
           MERLNS+LY QNC+IMKENERLRKK               KQK+S G    NNA  PNT 
Sbjct: 1   MERLNSKLYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNQKANNASNPNTF 60

Query: 144 LDL 146
           LDL
Sbjct: 61  LDL 63