Miyakogusa Predicted Gene

Lj1g3v4695470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4695470.1 Non Chatacterized Hit- tr|I1HFP0|I1HFP0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.52,1e-18,ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; no description,Zinc
fing,CUFF.32946.1
         (315 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37540.1                                                       302   3e-82
Glyma03g34850.2                                                       211   9e-55
Glyma03g34850.1                                                       211   9e-55
Glyma12g30600.1                                                       122   5e-28
Glyma12g09000.1                                                       110   2e-24
Glyma11g19480.1                                                       108   7e-24
Glyma17g05340.1                                                       101   9e-22
Glyma11g19480.2                                                        73   4e-13

>Glyma19g37540.1 
          Length = 293

 Score =  302 bits (774), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 174/314 (55%), Positives = 199/314 (63%), Gaps = 23/314 (7%)

Query: 1   MEFWGVEVKSGESLKVDPEDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTLS 60
           MEFWGVEVK+GESLKVDP DDKI+HLS AC+GDV+KD G   V++YVKFG+QK  LGTLS
Sbjct: 1   MEFWGVEVKNGESLKVDPGDDKIIHLSNACMGDVTKDIGGGPVALYVKFGNQKFVLGTLS 60

Query: 61  ADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFKAESQAVXXXXXXXXXXXXXXXIPISV 120
           +DK+PQISYDL+FEKEFELSHNWK+GSVFFTGFKA+ Q+                 P+S 
Sbjct: 61  SDKFPQISYDLVFEKEFELSHNWKYGSVFFTGFKAQPQSESDDDEDSDDIDEDI--PVSA 118

Query: 121 SNGKPEIEVKNSAKPNANEAKQKEKITDLKKNENNKGKAAIAXXXXXXXXXXXXXXXXXX 180
            NGKPE+ V    KP+ANEAKQK KI D +K + N                         
Sbjct: 119 VNGKPEVGV----KPDANEAKQK-KIADPRKRDAN------GEDDDSSESDSDDDSSEDK 167

Query: 181 PMPNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPKKAEGSKKRVLDSPKNTPVPVK 240
           P  NG                               T KK E S KR ++S K TPVPVK
Sbjct: 168 PTANG-----DIESSEGDDDSDDDEEEEGDDESDEETAKKIEASNKRGIESSKKTPVPVK 222

Query: 241 KAKFVTPQKTDSKNVAHVATPYP-KQAGKASASTKQPAKPQTPKSGGEYSCKPCNRSFKT 299
           K KFVTPQKTDSKNV H ATP+P KQAGKA+A+ K     Q+PKSGG+YSCKPCNR FKT
Sbjct: 223 KTKFVTPQKTDSKNVVHAATPHPSKQAGKATANNKL----QSPKSGGDYSCKPCNRLFKT 278

Query: 300 EDALGSHNKAKHSA 313
           EDAL SHNKAKHSA
Sbjct: 279 EDALSSHNKAKHSA 292


>Glyma03g34850.2 
          Length = 247

 Score =  211 bits (537), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 102/143 (71%), Positives = 116/143 (81%), Gaps = 2/143 (1%)

Query: 1   MEFWGVEVKSGESLKVDPEDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTLS 60
           MEFWGVEVKSGESLKVDP DDKI+HLS ACLGDV+KDK    V++YVKFG+QKL LGTLS
Sbjct: 35  MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 94

Query: 61  ADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFKAESQAVXXXXXXXXXXXXXXXIPISV 120
           ++ +PQISYDL+FEKEFELSHNWKHGSVFFTGFKA+SQ+                IP+S 
Sbjct: 95  SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQS--ESDNDEDSDDFDEDIPVSA 152

Query: 121 SNGKPEIEVKNSAKPNANEAKQK 143
           +NGKPEIEVKN  KP+ANEAKQK
Sbjct: 153 ANGKPEIEVKNGIKPDANEAKQK 175


>Glyma03g34850.1 
          Length = 322

 Score =  211 bits (537), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 117/144 (81%), Gaps = 2/144 (1%)

Query: 1   MEFWGVEVKSGESLKVDPEDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTLS 60
           MEFWGVEVKSGESLKVDP DDKI+HLS ACLGDV+KDK    V++YVKFG+QKL LGTLS
Sbjct: 35  MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 94

Query: 61  ADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFKAESQAVXXXXXXXXXXXXXXXIPISV 120
           ++ +PQISYDL+FEKEFELSHNWKHGSVFFTGFKA+SQ+                IP+S 
Sbjct: 95  SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQS--ESDNDEDSDDFDEDIPVSA 152

Query: 121 SNGKPEIEVKNSAKPNANEAKQKE 144
           +NGKPEIEVKN  KP+ANEAKQK+
Sbjct: 153 ANGKPEIEVKNGIKPDANEAKQKK 176



 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 81/98 (82%), Gaps = 5/98 (5%)

Query: 217 TPKKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYP-KQAGKASASTKQ 275
           TPKK E S KR +DS K TPVPVKK KFVTPQKTDSKNV HVATP+P KQ GKA+A+ KQ
Sbjct: 228 TPKKIEASNKRGIDSSKKTPVPVKKTKFVTPQKTDSKNVVHVATPHPSKQTGKATANNKQ 287

Query: 276 PAKPQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKHSA 313
               QTPKSGG+YSCKPCNRSFKTEDAL SHNKAKHS 
Sbjct: 288 ----QTPKSGGDYSCKPCNRSFKTEDALSSHNKAKHST 321


>Glyma12g30600.1 
          Length = 307

 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 77/128 (60%), Gaps = 1/128 (0%)

Query: 1   MEFWGVEVKSGESLKVDP-EDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTL 59
           MEFWG EVK GES+KVDP E +  +HLS A LG+  KDK +E V +Y+K G QK  LGTL
Sbjct: 1   MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKSNEPVVLYLKVGQQKFVLGTL 60

Query: 60  SADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFKAESQAVXXXXXXXXXXXXXXXIPIS 119
           S +K PQI  +L+ EKEFELSHN K+ SV F G+KA   A                  + 
Sbjct: 61  SREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDAGDDSEEDEFTDSEEDVPLLK 120

Query: 120 VSNGKPEI 127
             NGKPE 
Sbjct: 121 AENGKPET 128



 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 6/98 (6%)

Query: 219 KKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYPKQAGKASASTKQPAK 278
           KKA+  KKR  +S   TPV  KKAK  TP+KTD K   H ATP+P + G  + S++  AK
Sbjct: 208 KKADLGKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPSSEAKAK 267

Query: 279 -----PQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKH 311
                 +TP SGG  SCK C++SF +E  L  HNKAKH
Sbjct: 268 TPNNEAKTPMSGG-LSCKSCSKSFNSESGLQQHNKAKH 304


>Glyma12g09000.1 
          Length = 299

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 2/96 (2%)

Query: 1   MEFWGVEVKSGESLKVDPED--DKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGT 58
           MEFWGVEVK G+++ VDP D  D  +H+S   LG+  KDK +E V +Y+K G+QK+ LGT
Sbjct: 5   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 64

Query: 59  LSADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFK 94
           LS D  P +S DL+ + + ELSH  K  SVFF G+K
Sbjct: 65  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYK 100



 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 55/94 (58%), Gaps = 5/94 (5%)

Query: 219 KKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYP-KQAGKASASTKQPA 277
           KK +  KKR  +S   TP+  KKAK  TP+KTD K   HVATP+P K+ GK   STK   
Sbjct: 207 KKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNSTKG-- 264

Query: 278 KPQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKH 311
             QTP S G+ SC  C +SF  E  L  H KAKH
Sbjct: 265 --QTPNSAGQLSCASCKKSFTNEAGLQQHKKAKH 296


>Glyma11g19480.1 
          Length = 289

 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 1   MEFWGVEVKSGESLKVDPED--DKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGT 58
           MEFWGVEVK G+++ VDP D  D  +H+S   LG+  K+K +E+V +Y+K G+QK+ LGT
Sbjct: 5   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKEKPNESVVLYLKVGEQKIVLGT 64

Query: 59  LSADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFK 94
           LS D  P +S DL+ + + ELSH  K  SVFF G++
Sbjct: 65  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYR 100



 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 5/94 (5%)

Query: 219 KKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYP-KQAGKASASTKQPA 277
           KK +  KKR  +S   TPV  KKAK  TP+KT+ K   HVATP+P K+ GK   STK   
Sbjct: 197 KKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNVHVATPHPSKKGGKTPNSTKG-- 254

Query: 278 KPQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKH 311
             Q+P S G+ SC  C +SF  E  L  H KAKH
Sbjct: 255 --QSPSSAGQLSCASCKKSFTNEVGLQQHKKAKH 286


>Glyma17g05340.1 
          Length = 159

 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 2/85 (2%)

Query: 1  MEFWGVEVKSGESLKVDP-EDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTL 59
          MEFWG EVK GES+KVDP E +  +HLS A LG+  KDK  E V +Y+K G+QK  LGTL
Sbjct: 1  MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDK-PEPVVLYMKVGEQKFVLGTL 59

Query: 60 SADKYPQISYDLIFEKEFELSHNWK 84
          S +K PQIS +L+ EKEFELSH+ K
Sbjct: 60 SREKIPQISLELVLEKEFELSHSSK 84


>Glyma11g19480.2 
          Length = 193

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 5/94 (5%)

Query: 219 KKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYP-KQAGKASASTKQPA 277
           KK +  KKR  +S   TPV  KKAK  TP+KT+ K   HVATP+P K+ GK   STK   
Sbjct: 101 KKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNVHVATPHPSKKGGKTPNSTKG-- 158

Query: 278 KPQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKH 311
             Q+P S G+ SC  C +SF  E  L  H KAKH
Sbjct: 159 --QSPSSAGQLSCASCKKSFTNEVGLQQHKKAKH 190