Miyakogusa Predicted Gene

Lj1g3v4680330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4680330.1 tr|A9RAU8|A9RAU8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_63656
,33.81,8e-17,Tudor/PWWP/MBT,NULL; PWWP,PWWP; no description,NULL;
seg,NULL,CUFF.33000.1
         (321 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37070.4                                                       364   e-101
Glyma03g34390.1                                                       355   4e-98
Glyma19g37070.1                                                       271   6e-73
Glyma19g37070.3                                                       223   2e-58
Glyma19g37070.2                                                       220   1e-57
Glyma04g09700.1                                                        64   3e-10
Glyma06g09800.1                                                        58   1e-08
Glyma19g42260.1                                                        55   2e-07
Glyma20g37950.1                                                        54   3e-07
Glyma10g29330.1                                                        53   5e-07

>Glyma19g37070.4 
          Length = 329

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/262 (68%), Positives = 210/262 (80%), Gaps = 1/262 (0%)

Query: 61  VTASSLQERTSTGNLFSDDTLVRCSNYQHGKPVCSSESSDVPAVEVDSVVKDEGLDHSVN 120
           V +SSLQ R      FS+D +V+CS YQ G+PVCSSES D P VEVDS V+DE L+   +
Sbjct: 68  VASSSLQGRKMVMKQFSEDIMVQCSIYQEGRPVCSSESFDTPVVEVDSAVQDEILNLGGH 127

Query: 121 RDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTPGSVVWARTAGEIWWPAEIMEERPALSD 180
           R +C+EKIDI K  EST           LA TPG+VVWART G++WWPAEI+EE  ALS+
Sbjct: 128 RAACNEKIDISKMSESTRLESYVCDSSSLAATPGNVVWARTDGQVWWPAEILEETSALSN 187

Query: 181 PVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSFEERSNNPSKDFQEALKQALQRKAQLSS 240
           P S GHVLVQFYGN PSAW+DP+TDISTFEDSFE++SNNPS+DFQ+ALK+ALQRKAQLSS
Sbjct: 188 PGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDKSNNPSEDFQQALKKALQRKAQLSS 247

Query: 241 CRKLSPDRSAHSDQQERSSGKCTSASSSRTVDD-QERRRGQRKRKPKVHFDEATCSMKPE 299
           C+KL+ DRSAHSD QERSS KCTS S+S+T+DD QE+RRG+R+RKPKVHFDE T  MK E
Sbjct: 248 CQKLTLDRSAHSDMQERSSDKCTSTSTSKTIDDVQEKRRGKRERKPKVHFDEVTYPMKSE 307

Query: 300 KSARRLKIMRYLGLAPPVGSPF 321
           +  RRLKIMRYLGLAPPVGSPF
Sbjct: 308 RKVRRLKIMRYLGLAPPVGSPF 329


>Glyma03g34390.1 
          Length = 328

 Score =  355 bits (911), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 185/262 (70%), Positives = 210/262 (80%), Gaps = 1/262 (0%)

Query: 61  VTASSLQERTSTGNLFSDDTLVRCSNYQHGKPVCSSESSDVPAVEVDSVVKDEGLDHSVN 120
           V +S LQ R      FS+D LVRCS YQ G+PVCSSES D P VEVDS V+DE L+   +
Sbjct: 67  VASSCLQGRRMAMKQFSEDMLVRCSFYQEGRPVCSSESFDTPVVEVDSAVQDESLNLGGH 126

Query: 121 RDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTPGSVVWARTAGEIWWPAEIMEERPALSD 180
           RD+C+EKI+I K  ESTP          LAVTPGSVVWART  ++WWPAEIMEE   LS+
Sbjct: 127 RDACNEKINISKMSESTPLESSVSDSSSLAVTPGSVVWARTDSQVWWPAEIMEETSVLSN 186

Query: 181 PVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSFEERSNNPSKDFQEALKQALQRKAQLSS 240
           P +DGHVLVQFYGN PSAW+DP+TDISTFEDSFE+RSNNPS+DFQ+ALKQALQRKAQLSS
Sbjct: 187 PGNDGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDRSNNPSEDFQKALKQALQRKAQLSS 246

Query: 241 CRKLSPDRSAHSDQQERSSGKCTSASSSRTVDD-QERRRGQRKRKPKVHFDEATCSMKPE 299
           C+KL+PDRSAH D QERSS KCTS S+S+T+DD QERRRG+R+RKPKVHFDE T  MK E
Sbjct: 247 CQKLTPDRSAHYDLQERSSDKCTSTSTSKTIDDVQERRRGKRERKPKVHFDEVTYPMKSE 306

Query: 300 KSARRLKIMRYLGLAPPVGSPF 321
              RRLKIMRYLGLAPPVGSPF
Sbjct: 307 TKVRRLKIMRYLGLAPPVGSPF 328


>Glyma19g37070.1 
          Length = 331

 Score =  271 bits (693), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 157/200 (78%)

Query: 61  VTASSLQERTSTGNLFSDDTLVRCSNYQHGKPVCSSESSDVPAVEVDSVVKDEGLDHSVN 120
           V +SSLQ R      FS+D +V+CS YQ G+PVCSSES D P VEVDS V+DE L+   +
Sbjct: 68  VASSSLQGRKMVMKQFSEDIMVQCSIYQEGRPVCSSESFDTPVVEVDSAVQDEILNLGGH 127

Query: 121 RDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTPGSVVWARTAGEIWWPAEIMEERPALSD 180
           R +C+EKIDI K  EST           LA TPG+VVWART G++WWPAEI+EE  ALS+
Sbjct: 128 RAACNEKIDISKMSESTRLESYVCDSSSLAATPGNVVWARTDGQVWWPAEILEETSALSN 187

Query: 181 PVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSFEERSNNPSKDFQEALKQALQRKAQLSS 240
           P S GHVLVQFYGN PSAW+DP+TDISTFEDSFE++SNNPS+DFQ+ALK+ALQRKAQLSS
Sbjct: 188 PGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDKSNNPSEDFQQALKKALQRKAQLSS 247

Query: 241 CRKLSPDRSAHSDQQERSSG 260
           C+KL+ DRSAHSD QERSSG
Sbjct: 248 CQKLTLDRSAHSDMQERSSG 267


>Glyma19g37070.3 
          Length = 270

 Score =  223 bits (568), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/184 (59%), Positives = 135/184 (73%), Gaps = 2/184 (1%)

Query: 61  VTASSLQERTSTGNLFSDDTLVRCSNYQHGKPVCSSESSDVPAVEVDSVVKDEGLDHSVN 120
           V +SSLQ R      FS+D +V+CS YQ G+PVCSSES D P VEVDS V+DE L+   +
Sbjct: 68  VASSSLQGRKMVMKQFSEDIMVQCSIYQEGRPVCSSESFDTPVVEVDSAVQDEILNLGGH 127

Query: 121 RDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTPGSVVWARTAGEIWWPAEIMEERPALSD 180
           R +C+EKIDI K  EST           LA TPG+VVWART G++WWPAEI+EE  ALS+
Sbjct: 128 RAACNEKIDISKMSESTRLESYVCDSSSLAATPGNVVWARTDGQVWWPAEILEETSALSN 187

Query: 181 PVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSFEERSNNPSKDFQEALKQALQRKAQLSS 240
           P S GHVLVQFYGN PSAW+DP+TDISTFEDSFE++SNNPS+DFQ+ALK+      QL+ 
Sbjct: 188 PGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDKSNNPSEDFQQALKKI--NALQLAQ 245

Query: 241 CRKL 244
            ++L
Sbjct: 246 AKQL 249


>Glyma19g37070.2 
          Length = 241

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 129/171 (75%)

Query: 61  VTASSLQERTSTGNLFSDDTLVRCSNYQHGKPVCSSESSDVPAVEVDSVVKDEGLDHSVN 120
           V +SSLQ R      FS+D +V+CS YQ G+PVCSSES D P VEVDS V+DE L+   +
Sbjct: 68  VASSSLQGRKMVMKQFSEDIMVQCSIYQEGRPVCSSESFDTPVVEVDSAVQDEILNLGGH 127

Query: 121 RDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTPGSVVWARTAGEIWWPAEIMEERPALSD 180
           R +C+EKIDI K  EST           LA TPG+VVWART G++WWPAEI+EE  ALS+
Sbjct: 128 RAACNEKIDISKMSESTRLESYVCDSSSLAATPGNVVWARTDGQVWWPAEILEETSALSN 187

Query: 181 PVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSFEERSNNPSKDFQEALKQA 231
           P S GHVLVQFYGN PSAW+DP+TDISTFEDSFE++SNNPS+DFQ+ALK+ 
Sbjct: 188 PGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDKSNNPSEDFQQALKKV 238


>Glyma04g09700.1 
          Length = 208

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 31/190 (16%)

Query: 150 AVTPGSVVWARTAGEIWWPAEIMEE-------RPALSDPVSDGHVLVQFYGNNPSAWVDP 202
           +V  G V++ +  G  WWP ++++E       +P+       G +LV+ YG+   ++ DP
Sbjct: 20  SVAVGDVIFVKLRGSSWWPVQVVDENSVNKSVKPSKRTKRLPGDILVRHYGSYTYSYADP 79

Query: 203 VTDISTFEDSFEERSNNPSKDFQEALKQALQRKAQLSSCRKLSPDRSAHSDQQERSSGKC 262
           +     F+   E    +  K   + L+Q L             P   +   +   S  K 
Sbjct: 80  IKCRDEFKRILERNDGSLKKVLLQTLEQDL-------------PSTKSRRSKGSSSKPKG 126

Query: 263 TS---ASSSRTVDDQERRRGQRKRKPKVHFDEATC--------SMKPEKSARRLKIMRYL 311
           TS   A+  R  + +++ + + K+K  ++ D+  C           PE S+RR+++M  L
Sbjct: 127 TSSKDAAGKRKSNWEDKEQNKNKQKETLNVDDPACQSWETSSLGKSPELSSRRIRVMENL 186

Query: 312 GLAPPVGSPF 321
           GL  P GSPF
Sbjct: 187 GLVAPAGSPF 196


>Glyma06g09800.1 
          Length = 206

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 24/184 (13%)

Query: 154 GSVVWARTAGEIWWPAEIMEE-------RPALSDPVSDGHVLVQFYGNNPSAWVDPVTDI 206
           G V++ +  G  WWPA++++E       +P+       G +LV+ YG+   ++ DP+   
Sbjct: 25  GDVIFVKLRGSSWWPAQVVDENSVNKSVKPSKRTKRLPGDILVRHYGSYTYSYADPIKCR 84

Query: 207 STFEDSFEERSNNPSKDFQEALKQALQRKAQLSSCRKLSPDRSAHSDQQERSSGKCTSAS 266
             F+   +    +  K   + L+Q L       S    S  +   S   + ++GK  S  
Sbjct: 85  DEFKTILDRNDGSLRKVLLQTLEQDLPSTKSRRSKGSSSKPKGTSS---KNAAGKRKSNG 141

Query: 267 SSRTVDDQERRRGQRKRKPKVHFDE---------ATCSMKPEKSARRLKIMRYLGLAPPV 317
                +D+E+ + + +++ +   D+         ++    PE S+RR+++M  LGL  P 
Sbjct: 142 -----EDKEQNKNKHEKQKETSNDDDLSSQSRETSSLGKSPELSSRRVRVMENLGLIAPA 196

Query: 318 GSPF 321
           GSPF
Sbjct: 197 GSPF 200


>Glyma19g42260.1 
          Length = 967

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 9/108 (8%)

Query: 154 GSVVWARTAGEIWWPAEIMEE---RPALSDPVSDGHVLVQFYGNNPSAWVDPVTDISTFE 210
           G +VW +     WWP  +  E    P++     +GHVLV F+G++   W +P  ++  F+
Sbjct: 79  GDMVWGKVKSHPWWPGHLYNEAFASPSVRRSKHEGHVLVAFFGDSSYGWFEP-EELIPFD 137

Query: 211 DSFEERSNNP-SKDF----QEALKQALQRKAQLSSCRKLSPDRSAHSD 253
            +F E+S    S+ F    +EA+ +A +R+    +CR  +P+  + +D
Sbjct: 138 ANFAEKSQQTNSRTFLRAVEEAVDEACRRRWLGLACRCRNPENFSATD 185


>Glyma20g37950.1 
          Length = 947

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 154 GSVVWARTAGEIWWPAEIMEE---RPALSDPVSDGHVLVQFYGNNPSAWVDPVTDISTFE 210
           G +VW +     WWP  I  E     A+     +GHVLV F+G++   W +P +++  F+
Sbjct: 107 GDMVWGKVKSHPWWPGHIYNEAFASSAVRRTKREGHVLVAFFGDSSYGWFEP-SELIPFD 165

Query: 211 DSFEERSNN-PSKDFQEALKQAL 232
            +F E+S    S++F +A+++A+
Sbjct: 166 ANFAEKSRQISSRNFLKAVEEAV 188


>Glyma10g29330.1 
          Length = 981

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 154 GSVVWARTAGEIWWPAEIMEE---RPALSDPVSDGHVLVQFYGNNPSAWVDPVTDISTFE 210
           G +VW +     WWP  I  E     A+     +GHVLV F+G++   W +P +++  F+
Sbjct: 88  GDMVWGKVKSHPWWPGHIYNEAFASSAVRRTKREGHVLVAFFGDSSYGWFEP-SELIPFD 146

Query: 211 DSFEERSNN-PSKDFQEALKQAL 232
            +F E+S    S++F +A+++A+
Sbjct: 147 ANFAEKSRQISSRNFLKAVEEAV 169