Miyakogusa Predicted Gene

Lj1g3v4616540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4616540.1 Non Chatacterized Hit- tr|K3XN47|K3XN47_SETIT
Uncharacterized protein OS=Setaria italica GN=Si002987,52.17,5e-18,
,CUFF.32805.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36960.2                                                       207   3e-54
Glyma03g34250.1                                                       203   4e-53
Glyma19g36960.1                                                       174   2e-44

>Glyma19g36960.2 
          Length = 124

 Score =  207 bits (526), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 99/119 (83%), Positives = 106/119 (89%)

Query: 12  SLQNDVPWRALSSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPIGGGFGEGAIVEA 71
           SLQ DVPWRA SSS KP+PKIH SP+LR+SQ P SDY ISVMRHPDPIGGG G  AIVE 
Sbjct: 6   SLQKDVPWRASSSSAKPIPKIHHSPLLRVSQTPVSDYGISVMRHPDPIGGGLGHEAIVEP 65

Query: 72  AGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELKQLGKFMDDAVELMNKSFIER 130
           AGPDC+VPGQ MPI+LLGL+VWPI+VDLKFLEPVGRELK LGKFMDDAVELMNKSFIER
Sbjct: 66  AGPDCLVPGQKMPIQLLGLQVWPIHVDLKFLEPVGRELKMLGKFMDDAVELMNKSFIER 124


>Glyma03g34250.1 
          Length = 124

 Score =  203 bits (516), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 106/119 (89%)

Query: 12  SLQNDVPWRALSSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPIGGGFGEGAIVEA 71
           SLQ DVPWRA SSS KP+P+IH SP+LR+S+ P SDY ISVMRHPDPIGGG G+ A VE 
Sbjct: 6   SLQKDVPWRASSSSAKPIPRIHHSPLLRVSRTPVSDYGISVMRHPDPIGGGLGDEATVEP 65

Query: 72  AGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELKQLGKFMDDAVELMNKSFIER 130
           AGPDC+VPGQ MPI+LLGL+VWPI+VDLKFLEPVGRELK LGKFMDDAVELMNKSFIER
Sbjct: 66  AGPDCLVPGQKMPIQLLGLQVWPIHVDLKFLEPVGRELKMLGKFMDDAVELMNKSFIER 124


>Glyma19g36960.1 
          Length = 130

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 90/103 (87%)

Query: 12  SLQNDVPWRALSSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPIGGGFGEGAIVEA 71
           SLQ DVPWRA SSS KP+PKIH SP+LR+SQ P SDY ISVMRHPDPIGGG G  AIVE 
Sbjct: 6   SLQKDVPWRASSSSAKPIPKIHHSPLLRVSQTPVSDYGISVMRHPDPIGGGLGHEAIVEP 65

Query: 72  AGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELKQLGK 114
           AGPDC+VPGQ MPI+LLGL+VWPI+VDLKFLEPVGRELK LGK
Sbjct: 66  AGPDCLVPGQKMPIQLLGLQVWPIHVDLKFLEPVGRELKMLGK 108