Miyakogusa Predicted Gene

Lj1g3v4590970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4590970.1 tr|B9MTD3|B9MTD3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_781096 PE=4 SV=1,36.11,0.021,
,CUFF.32779.1
         (81 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36670.1                                                        90   6e-19

>Glyma19g36670.1 
          Length = 79

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 4/72 (5%)

Query: 1  MKITAIFLAILVLSSSLGESRALGLGGIYGQEQRNR--RGKVIESIESENMN-PNNPQGS 57
          MK+ A F+A++V++S  GESRA G+GGIYGQ+QRNR  RGKVI+SIE E  N  NNP+GS
Sbjct: 1  MKLLAFFIALIVVTSLFGESRASGIGGIYGQQQRNRDGRGKVIQSIEKEKTNIINNPKGS 60

Query: 58 AESAN-HHVKPK 68
           ESAN HH KPK
Sbjct: 61 VESANHHHAKPK 72