Miyakogusa Predicted Gene
- Lj1g3v4579230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4579230.1 Non Chatacterized Hit- tr|Q6XD29|Q6XD29_GOSBA
Putative uncharacterized protein (Fragment)
OS=Gossypi,79.17,0.00000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PLAC8,Uncharacterised protein family Cys-rich;
seg,,CUFF.32730.1
(234 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g36330.1 376 e-104
Glyma03g33620.1 372 e-103
Glyma03g33620.3 221 3e-58
Glyma03g33620.2 95 8e-20
Glyma01g44060.1 69 5e-12
Glyma11g01530.1 69 5e-12
Glyma06g47570.1 50 2e-06
Glyma04g14010.1 50 2e-06
>Glyma19g36330.1
Length = 228
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/235 (80%), Positives = 199/235 (84%), Gaps = 8/235 (3%)
Query: 1 MADNNKQSDNNHDEASPLLXXXXXXXXPKAPPVPQSPQD-FLLGWTADGHPVPHGSVVGQ 59
MADN + NH+EASPLL PK+ P FLLGWTADG P+ HGSVVGQ
Sbjct: 1 MADNKQP---NHEEASPLLHQSQ----PKSEPPTPPETPEFLLGWTADGLPLGHGSVVGQ 53
Query: 60 PMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTFVNHCLP 119
PM R+PWNSSICACLGQ D FCSSDLEVCLLGSVAPCVLYGSNVERL S PGTF NHCLP
Sbjct: 54 PMGRAPWNSSICACLGQTDHFCSSDLEVCLLGSVAPCVLYGSNVERLESAPGTFANHCLP 113
Query: 120 YSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQRE 179
YSG+Y+IGNSCFGWNCLAP FSYPSRTA+RRRFNLEGSCEALNRSCGCCGS +EDE QRE
Sbjct: 114 YSGMYIIGNSCFGWNCLAPWFSYPSRTAIRRRFNLEGSCEALNRSCGCCGSILEDEVQRE 173
Query: 180 QCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQAMGRAA 234
QCES CDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQ MGR A
Sbjct: 174 QCESTCDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQTMGREA 228
>Glyma03g33620.1
Length = 230
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/241 (78%), Positives = 200/241 (82%), Gaps = 18/241 (7%)
Query: 1 MADNNKQSDNNHDEASPLLXXXXXXXXPKAPPVPQSPQD-------FLLGWTADGHPVPH 53
MADN + N++EASPLL + P P+S FLLGWTADG P+ H
Sbjct: 1 MADNEQP---NNEEASPLLH--------QPHPQPKSEPPTPPETPEFLLGWTADGLPLAH 49
Query: 54 GSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTF 113
SVVGQPM R+PWNSSICACLGQND FCSSDLEVCLLGSVAPCVLYGSNVERLGS GTF
Sbjct: 50 ASVVGQPMGRAPWNSSICACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNVERLGSARGTF 109
Query: 114 VNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFME 173
NHCLPYSG+Y+IGNSCFGWNCLAP FSYPSRTA+RRRFNLEGSCEALNRSCGCCGS +E
Sbjct: 110 ANHCLPYSGMYIIGNSCFGWNCLAPWFSYPSRTAIRRRFNLEGSCEALNRSCGCCGSILE 169
Query: 174 DEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQAMGRA 233
DE QRE CESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQ MGR
Sbjct: 170 DEVQREHCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQTMGRE 229
Query: 234 A 234
A
Sbjct: 230 A 230
>Glyma03g33620.3
Length = 161
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/162 (71%), Positives = 126/162 (77%), Gaps = 18/162 (11%)
Query: 1 MADNNKQSDNNHDEASPLLXXXXXXXXPKAPPVPQSPQD-------FLLGWTADGHPVPH 53
MADN + N++EASPLL + P P+S FLLGWTADG P+ H
Sbjct: 1 MADNEQP---NNEEASPLLH--------QPHPQPKSEPPTPPETPEFLLGWTADGLPLAH 49
Query: 54 GSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTF 113
SVVGQPM R+PWNSSICACLGQND FCSSDLEVCLLGSVAPCVLYGSNVERLGS GTF
Sbjct: 50 ASVVGQPMGRAPWNSSICACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNVERLGSARGTF 109
Query: 114 VNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLE 155
NHCLPYSG+Y+IGNSCFGWNCLAP FSYPSRTA+RRRFNLE
Sbjct: 110 ANHCLPYSGMYIIGNSCFGWNCLAPWFSYPSRTAIRRRFNLE 151
>Glyma03g33620.2
Length = 119
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 63/96 (65%), Gaps = 18/96 (18%)
Query: 1 MADNNKQSDNNHDEASPLLXXXXXXXXPKAPPVPQSPQD-------FLLGWTADGHPVPH 53
MADN + N++EASPLL + P P+S FLLGWTADG P+ H
Sbjct: 1 MADNEQP---NNEEASPLLH--------QPHPQPKSEPPTPPETPEFLLGWTADGLPLAH 49
Query: 54 GSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCL 89
SVVGQPM R+PWNSSICACLGQND FCSSDLEV L
Sbjct: 50 ASVVGQPMGRAPWNSSICACLGQNDHFCSSDLEVFL 85
>Glyma01g44060.1
Length = 185
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 45/186 (24%)
Query: 55 SVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTFV 114
S G ++ W+S ICAC D++ C +G + PC L+G N E LGS GTF+
Sbjct: 29 STNGSNQMQAQWSSGICAC--------CDDMQSCCIGCLCPCFLFGKNAEFLGS--GTFL 78
Query: 115 NHCLPYSGLY-VIGNSC------FGWN---CLAPLFSYPSRTALRRRFNLEGSCEALNRS 164
C+ + L+ V+ +C W CL ++ R ALR ++NL
Sbjct: 79 GSCVTHFILWSVVNTACCLLTDGLFWGLPGCLVSCYACGYRKALRSKYNLP------EAP 132
Query: 165 CGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIP 224
CG D TH CH CA+CQE RE+R R + V+
Sbjct: 133 CG-------------------DFVTHFCCHPCAICQEYREIRERSGDCEATDLKLAVVAA 173
Query: 225 PGEQAM 230
P Q M
Sbjct: 174 PPIQTM 179
>Glyma11g01530.1
Length = 188
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 85/213 (39%), Gaps = 50/213 (23%)
Query: 30 APP--VPQSPQDFLLGWTADGHPVPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEV 87
PP +P P D D + S G ++ W+S ICAC D++
Sbjct: 8 VPPAYIPLGPSD---SEAVDVSLLQRSSTNGSNQMQAQWSSGICAC--------CDDMQS 56
Query: 88 CLLGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLYVIGNSC-------FGWN---CLA 137
C +G + PC L+G N + LGS GTF+ C+ + L+ + N+ W CL
Sbjct: 57 CCIGCLCPCFLFGKNADFLGS--GTFLGSCVTHFILWSVVNTACCLLTDGLFWGLPGCLV 114
Query: 138 PLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCA 197
++ R ALR ++NL CG D TH CH CA
Sbjct: 115 SCYACGYRKALRSKYNLP------EAPCG-------------------DFVTHFCCHPCA 149
Query: 198 LCQEGRELRRRLPHPGFNAQPVLVMIPPGEQAM 230
+CQE RE+R R + V+ P Q M
Sbjct: 150 ICQEYREIRERSGDCEATDLKLAVVTAPPIQTM 182
>Glyma06g47570.1
Length = 239
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 48 GHPVPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERL- 106
G P+P P + PW + I C G D E CL G PCVL+G NVE L
Sbjct: 45 GQPLPESYT---PPADEPWMTGIFGCTG--------DRENCLTGLFCPCVLFGRNVETLH 93
Query: 107 GSTPGTFVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSC----EALN 162
TP T C ++V G + + TA+ F G+ E L
Sbjct: 94 EETPWTGPCVC---HAIFVEGG-----------IALATATAIFNGFIDPGTSFLIFEGLF 139
Query: 163 RSCGCCGSFMEDEAQREQCE-----SACD-LATHVFCHVCALCQEGRELRRRLPHPGFNA 216
+ CG + Q Q + S CD H H CALCQE RE++ RL F +
Sbjct: 140 FTWWMCGIYTGQVRQNLQKKYHLQNSPCDPCCVHCCMHWCALCQEHREMKGRLSDSIF-S 198
Query: 217 QPVLVMIPPGEQ 228
+ +V PP ++
Sbjct: 199 ETTIVNAPPVQE 210
>Glyma04g14010.1
Length = 239
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 76/204 (37%), Gaps = 61/204 (29%)
Query: 48 GHPVPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERL- 106
G P+P P + PW + I C + D E CL G PCVL+G NVE L
Sbjct: 45 GQPLPESYT---PPADEPWMTGIFGC--------TEDRENCLTGLFCPCVLFGRNVETLH 93
Query: 107 GSTPGT----------------------FVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPS 144
TP T F +P + + F W + +++
Sbjct: 94 EETPWTGPCICHAIFVEGGIALATATAIFNGFIVPGTSFLIFEGLFFTW-WMCGIYTGQV 152
Query: 145 RTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRE 204
R L+++++LE S C+ C H H CALCQE RE
Sbjct: 153 RQNLQKKYHLENS----------------------PCDPCC---VHCCMHWCALCQEHRE 187
Query: 205 LRRRLPHPGFNAQPVLVMIPPGEQ 228
++ RL F + +V PP ++
Sbjct: 188 MKGRLSD-SFFPETTIVNAPPIQE 210