Miyakogusa Predicted Gene

Lj1g3v4579180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579180.1 Non Chatacterized Hit- tr|B6T001|B6T001_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,29.8,0.000003,seg,NULL,CUFF.32721.1
         (312 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36320.1                                                       196   3e-50
Glyma03g33610.1                                                       185   6e-47
Glyma10g05770.1                                                       179   2e-45
Glyma13g20130.1                                                       129   4e-30
Glyma18g44660.1                                                       126   3e-29
Glyma15g36860.1                                                        92   5e-19
Glyma09g17030.1                                                        68   2e-11
Glyma15g13050.1                                                        52   6e-07

>Glyma19g36320.1 
          Length = 248

 Score =  196 bits (497), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/196 (59%), Positives = 135/196 (68%), Gaps = 14/196 (7%)

Query: 3   KLSARAISSSPARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTTVETQE 62
           KLSA+ ISS P RTDKFPPPLM RFLR+NAG            PMF+RKKNTT    TQE
Sbjct: 2   KLSAKPISS-PGRTDKFPPPLM-RFLRSNAGSRSRRSRSS---PMFVRKKNTTFETHTQE 56

Query: 63  PSSPKVTCMGQVRAKRSSK--STPPKRE--TRASSATPCRCWWIRKPNNPCRCRPVWPKW 118
           PSSPKVTCMGQVR KR+SK  +T P             C C+WIR+PNNPCRC P+WP W
Sbjct: 57  PSSPKVTCMGQVRVKRASKQPTTQPDLAPTRCRRRRRRCCCFWIRRPNNPCRCNPLWPNW 116

Query: 119 AFFRRKSTKLKEENSAKSESNFQGRSFEE---ESRMSTCDNVPFASISSTPPRNALLLTR 175
            FFRRK TKLK++  ++SE NF      E   + R++   +  FAS SSTPPRNALLLTR
Sbjct: 117 PFFRRKPTKLKQD--SQSEPNFYAHEESELPFQERVNVDKDSDFASNSSTPPRNALLLTR 174

Query: 176 CRSAPFRSSSLASKFW 191
           CRSAP+RSSSLAS+FW
Sbjct: 175 CRSAPYRSSSLASRFW 190


>Glyma03g33610.1 
          Length = 259

 Score =  185 bits (469), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 157/280 (56%), Gaps = 29/280 (10%)

Query: 3   KLSARAISSSPARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTT-VETQ 61
           KLSA+ ISS P RTDKFPPPLM RFLR+NA             PMF+RKKNTT    +TQ
Sbjct: 2   KLSAKPISS-PGRTDKFPPPLM-RFLRSNAASRSTRRSKSS--PMFVRKKNTTAIETQTQ 57

Query: 62  EPSSPKVTCMGQVRAKRSSKST----PPKRETRASSATPCRCWWIRKPNN-PCRCRPVWP 116
           EPSSPKVTCMGQVR K+++ ++    PP+   R          WIR PNN PCRC+P+WP
Sbjct: 58  EPSSPKVTCMGQVRVKQAATTSRDLAPPRCRCRCYCC------WIRSPNNHPCRCKPLWP 111

Query: 117 KW-AFFRRKSTKLKEENSAKSESNFQGRSFEEESRMSTCDNVPFASISSTPPRNALLLTR 175
            W +FFRRK T LK  +  +   + Q        R++   +  FAS SSTPPRNALLLTR
Sbjct: 112 NWPSFFRRKPTTLKHHSEPERNFHDQESELPFHERVNVDKDSDFASNSSTPPRNALLLTR 171

Query: 176 CRSAPFRSSSLASKFWXXXXXXXXXXXXXXXXXXKPVSVRHSVSESEAKRVSESETKMEF 235
           CRSAP+RSSSLAS+FW                      + ++  +       ++E ++ F
Sbjct: 172 CRSAPYRSSSLASRFWSSPVKDQETE----------FPIPNTTEQQHTSEEPQTEPELGF 221

Query: 236 FKELEDSLLRQGITASITNNSEGNSASRSPVVLTRCKSEP 275
            +E   SL            +E  SAS  P VLTRCKSEP
Sbjct: 222 LREKIASL--TEPEKVEEVETETESASSRPTVLTRCKSEP 259


>Glyma10g05770.1 
          Length = 298

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/310 (43%), Positives = 164/310 (52%), Gaps = 50/310 (16%)

Query: 11  SSPARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTTVETQEPSSPKVTC 70
           SSP RT+KFPPPLM RFLR NA              MFLRKKNT   +ETQEPSSPKVTC
Sbjct: 9   SSPGRTEKFPPPLM-RFLRNNASSRSRGRSRTTTA-MFLRKKNTNN-IETQEPSSPKVTC 65

Query: 71  MGQVRAKRSSKSTPPKRETRASSATPCR---CWWI---------RKPNN--PCRCRPVWP 116
           MGQVR KRS+     KR   A + TP +   C W+          KP    P +C+ VWP
Sbjct: 66  MGQVRVKRSAS----KRVPSAGAGTPTKFRCCSWVPHALFFHRLIKPEVCFPFQCKQVWP 121

Query: 117 KWAFFRRK--STKLKEENSAKSESNFQGR------SFEEESRMSTCDNVPFASISSTPPR 168
            W F +RK   +K+ E +S K+E NF+GR        E + R+        ++ SSTPPR
Sbjct: 122 NWRFLQRKKRDSKVTETSSPKTELNFRGRFNPNYDDSEHKDRVIVNPPAFVSNTSSTPPR 181

Query: 169 NALLLTRCRSAPFRSSSLASKFWXXXXXXXXXXXXXXXXXXKPVSVRHSVSESEAKRVSE 228
           NALLLTRCRSAP R      +F                        R +   SE  R  +
Sbjct: 182 NALLLTRCRSAPGR------RFLNEETEVVEKN-------------RVNREHSENNRDRK 222

Query: 229 SETKMEFFKELEDSLLRQGITASITNNSEGNSASRSPVVLTRCKSEPANRGLRIDPEVNN 288
            E K+ FFKELE+SL  + I  S     E +S    P+VLTRCKSEPA    ++DPE+N 
Sbjct: 223 LEAKLRFFKELEESLRERIIMESEKAREESDSV--HPLVLTRCKSEPARTAQKLDPEMNG 280

Query: 289 LWKKRRLGFA 298
           L KK  LGFA
Sbjct: 281 LSKKTTLGFA 290


>Glyma13g20130.1 
          Length = 231

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/289 (39%), Positives = 134/289 (46%), Gaps = 67/289 (23%)

Query: 11  SSPARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTTVETQEPSSPKVTC 70
           SSP RT+KFPPPLM RFLR NA              MFLRKKNT   +ETQEPSSPKVTC
Sbjct: 5   SSPGRTEKFPPPLM-RFLRNNAASRSRGRSRTTTT-MFLRKKNTN--IETQEPSSPKVTC 60

Query: 71  MGQVRAKRSSK---STPPKRETRASSATPCRCWWIRKPNNPCRCRPVWPKWAFFRRKSTK 127
           MGQVR KRS+     +  KR   A +  P +          CRC    P   FF R    
Sbjct: 61  MGQVRVKRSATKRVDSDAKRVPSAGAGAPTK----------CRCCSWVPHALFFHR---- 106

Query: 128 LKEENSAKSESNFQGRSFEEESRMSTCDNVPFASISSTPP-RNALLLTRCRSAPFRSSSL 186
                       F+   F          + PF      P   NALLLTRCRSAP R    
Sbjct: 107 ------------FRKPGF----------SFPFQCKQVRPNWGNALLLTRCRSAPGR---- 140

Query: 187 ASKFWXXXXXXXXXXXXXXXXXXKPVSVRHSVSESEAKRVSESETKMEFFKELEDSLLRQ 246
             +F                     V  R +   SE  R  + E K+ FFKELE+S LR+
Sbjct: 141 --RFLNKETEV--------------VENRVNREHSENNRDPKLEAKLRFFKELEES-LRE 183

Query: 247 GITASITNNSEGNSASRSPVVLTRCKSEPANRGLRIDPEVNNLWKKRRL 295
            I  S     E +S    P+VLTRCKSEPA    ++DPE+N L +K  L
Sbjct: 184 RIMESEKQREESDSV--HPLVLTRCKSEPARTAQKLDPELNVLSEKTTL 230


>Glyma18g44660.1 
          Length = 237

 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/152 (56%), Positives = 101/152 (66%), Gaps = 9/152 (5%)

Query: 46  PMFLRKKNTTTTVETQE-PSSPKVTCMGQVRAKRSSKSTPPKRETRASSATPCRCW--WI 102
           PMF+RKKNTTT     + PSS KVTCMGQVR KR SK     +   A +   CRC   WI
Sbjct: 42  PMFIRKKNTTTIETQTQEPSSSKVTCMGQVRVKRPSKQGATTKRDLAPTRCRCRCNCCWI 101

Query: 103 RKPNN-PCRCRPVWPKW-AFFRRKSTKLKEENSAKSESNFQGRSFEE--ESRMSTCDNVP 158
           R PNN PCRC+P+WP W + FRRK TKLK  + ++ E NF     E     R++   +  
Sbjct: 102 RSPNNHPCRCKPLWPNWPSLFRRKPTKLK--HPSEPERNFHDEESELPFHERVNVDKDSD 159

Query: 159 FASISSTPPRNALLLTRCRSAPFRSSSLASKF 190
           FAS SSTPPRNALLLTRCRSAP+RSSSLAS+F
Sbjct: 160 FASNSSTPPRNALLLTRCRSAPYRSSSLASRF 191


>Glyma15g36860.1 
          Length = 167

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 82/168 (48%), Gaps = 26/168 (15%)

Query: 14  ARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTT-VETQEPSSPKVTCMG 72
            RT+KFPPPLM RFLR+N              PMF RKKN+TT   +TQEPSSPKV CMG
Sbjct: 12  GRTEKFPPPLM-RFLRSNVASRSSRRYKSS--PMFRRKKNSTTIETQTQEPSSPKVMCMG 68

Query: 73  QVRAKRSSKSTPPKRETRASSATPCRCWWIRKPNN-PCRCRPVWPKWAFFRRKSTKLKEE 131
           QVR K  SK     +   A +   C C WI+ PNN PCR +P+ P        S      
Sbjct: 69  QVRVKCPSKQGTTTKRDLAPTCCRCYCCWIQSPNNHPCRYKPLCPP------SSNITPSP 122

Query: 132 NSAKSESNFQGRSFEEESRMSTCDNVPFASISSTPPRNALLLTRCRSA 179
           ++     N   RS  + S +                RN LLLT CRSA
Sbjct: 123 STIFMTKNQNYRSMRDSSMLL---------------RNTLLLTHCRSA 155


>Glyma09g17030.1 
          Length = 84

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 4/72 (5%)

Query: 11 SSPARTDKFPPPLMMRFLRTNAGXXXXXXXXXXXXPMFLRKKNTTTTVETQE-PSSPKVT 69
          SSP RTDKFPPPLM RFL++N              PMF+RKKNTTT     + PSSPKVT
Sbjct: 9  SSPGRTDKFPPPLM-RFLKSNDASRSNRKSKSS--PMFVRKKNTTTIETQTQEPSSPKVT 65

Query: 70 CMGQVRAKRSSK 81
          C+GQVR KR SK
Sbjct: 66 CIGQVRGKRPSK 77


>Glyma15g13050.1 
          Length = 235

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 149 SRMSTCDNVPFASISSTPPRNALLLTRCRSAPFRSSSLASKFW 191
           S + T  N  + S+  TPPRN LLLT  RSAP+RSSSLAS+FW
Sbjct: 110 STIFTTKNQNYRSMRDTPPRNTLLLTSYRSAPYRSSSLASRFW 152