Miyakogusa Predicted Gene

Lj1g3v4578910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4578910.1 Non Chatacterized Hit- tr|B8LP65|B8LP65_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,47.37,3e-16,seg,NULL,CUFF.32697.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36160.1                                                       112   8e-26
Glyma03g33430.1                                                       112   1e-25

>Glyma19g36160.1 
          Length = 144

 Score =  112 bits (281), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 3   QMDIHVHLPLPPGFTXXXXXXXXXXXXXXXXXXXXXXXXKFICSKRXXXXXXXXXXXXXX 62
           QMD++ H+ LP   +                        K +CS R              
Sbjct: 2   QMDVYTHISLPSFISHRFSSSRFQCSSLSSYSPF-----KLVCSNRDSKESQRNDDNNNK 56

Query: 63  XXXXXXXXWDKAWKNFKKQGRKTLFSQFSPDKYVSWNPRRTDFPLSEEVDPIKRTERSNL 122
                   WDKAW  FKKQG K  FS+FS DKYVSWNP+R++FPLSEEVDPIKRTERSNL
Sbjct: 57  GDKSSTD-WDKAWSKFKKQGGKKPFSKFS-DKYVSWNPKRSEFPLSEEVDPIKRTERSNL 114

Query: 123 NLWTSPTFTLGGAVI 137
           + W SPTFTLGGA+I
Sbjct: 115 SFWNSPTFTLGGAII 129


>Glyma03g33430.1 
          Length = 142

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 71  WDKAWKNFKKQGRKTLFSQFSPDKYVSWNPRRTDFPLSEEVDPIKRTERSNLNLWTSPTF 130
           WDKAW  FKKQG K  FS+FS DKYVSWNPRR++FPLSEEVDPIKRTERSNL+ W SPTF
Sbjct: 62  WDKAWSKFKKQGGKKPFSKFS-DKYVSWNPRRSEFPLSEEVDPIKRTERSNLSFWNSPTF 120

Query: 131 TLGGAVI 137
           TLGGA+I
Sbjct: 121 TLGGAII 127