Miyakogusa Predicted Gene
- Lj1g3v4578900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4578900.1 tr|A9U207|A9U207_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_154541,33.15,2e-18,Thioredoxin-like,Thioredoxin-like
fold; no description,Thioredoxin-like fold;
AhpC-TSA_2,NULL,CUFF.32695.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g36130.1 455 e-128
Glyma03g33400.1 223 1e-58
Glyma17g17040.1 101 7e-22
Glyma17g17050.1 94 1e-19
Glyma17g17050.3 77 2e-14
Glyma17g17050.4 66 3e-11
Glyma02g13800.1 63 3e-10
Glyma09g24710.1 50 2e-06
>Glyma19g36130.1
Length = 256
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/258 (87%), Positives = 239/258 (92%), Gaps = 4/258 (1%)
Query: 1 MACSPSTTLFLSNSPLHLNKNTNQFPLQAFPTLSLNQNLQLYSKNLLNLSTNRHHATTLP 60
MACSPSTTL +SNS L LNK T+Q L PTLSLNQNL +YS NLL LST ++HATT P
Sbjct: 1 MACSPSTTL-VSNS-LLLNKTTSQCRLHVHPTLSLNQNLPIYSNNLLKLSTIQYHATTTP 58
Query: 61 --SASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRK 118
+ASAGVESPVL EDTT SLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRK
Sbjct: 59 FVAASAGVESPVLGEDTTSSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRK 118
Query: 119 RADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHSSYEALNFVSG 178
RADYL++KKD+MDASGVALVLIGPGS+DQAK+FAE++KF GEIYADPTHSSYEALNFVSG
Sbjct: 119 RADYLSSKKDIMDASGVALVLIGPGSIDQAKSFAEKSKFEGEIYADPTHSSYEALNFVSG 178
Query: 179 VLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKD 238
VLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLH+D
Sbjct: 179 VLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHRD 238
Query: 239 KEAGDDPEIEDILKACCS 256
KEAGDDPEIEDILKACCS
Sbjct: 239 KEAGDDPEIEDILKACCS 256
>Glyma03g33400.1
Length = 158
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
Query: 128 DLMDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHSSYEALNFVSGVLTTFTPNA 187
D+MDASGVALVLIGPGS+DQAK+F+E++KF GEIYADPTH SYEALNFVSGVLTTFTPNA
Sbjct: 33 DIMDASGVALVLIGPGSIDQAKSFSEKSKFEGEIYADPTHLSYEALNFVSGVLTTFTPNA 92
Query: 188 GLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDDPEI 247
GLKIIQLY+EGYRQ WKLSFEKDTVSRGGWKQGG IVAGP IS L DKEAGDDPEI
Sbjct: 93 GLKIIQLYLEGYRQHWKLSFEKDTVSRGGWKQGGTIVAGPAA--ISQL-VDKEAGDDPEI 149
Query: 248 EDILKACCS 256
EDI KACCS
Sbjct: 150 EDIFKACCS 158
>Glyma17g17040.1
Length = 251
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 28 QAFPTLSLNQNLQLYSKNLLNLSTNRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDL 87
+FP N + +L + ++++ + S S SP ++E+ L V +F
Sbjct: 21 HSFPATPFNYSPKLIASKGVSVTLRNSITSPRVSVSNSEYSPQIAEN----LGDVTIFTA 76
Query: 88 NGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSV 145
G + SDLW + AVVA RHFGC+ C + A L K D++G+ L+ +G G+
Sbjct: 77 AGEPVRFSDLWDQNQGVAVVAMLRHFGCICCWEFASALKESKARFDSAGIKLIAVGVGTP 136
Query: 146 DQAKAFAEQTKFGGE-IYADPTHSSYEALNFVSGVLTTFTPNAGLKIIQLY--MEGYRQD 202
++A+ AE+ F + +YADP +Y LN G+ TF A K+ + ++ ++
Sbjct: 137 NKARILAERLPFPMDCLYADPDRKAYNVLNLYFGLGRTFLNPASAKVFSRWDALQKAAKN 196
Query: 203 WKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDDPEIEDILKACC 255
+ + D +S G +QGG+ V GK + Y KD+ GD ++D+ CC
Sbjct: 197 YTIGATPDDIS-GVLQQGGMFVFR-GK-QLLYARKDEGTGDHAPLDDVFDVCC 246
>Glyma17g17050.1
Length = 251
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 50 STNRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRK--AVVAF 107
S H+ P S V + S +L V +F G + SDLW + AVVA
Sbjct: 41 SVTVRHSIVSPRVS--VSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVAL 98
Query: 108 ARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE-IYADPT 166
RHFGC C + A L K D++GV L+ +G G+ ++A+ AE+ F + +YADP
Sbjct: 99 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADPD 158
Query: 167 HSSYEALNFVSGVLTTFTPNAGLKIIQLY--MEGYRQDWKLSFEKDTVSRGGWKQGGIIV 224
+Y LN G TF + +K+ + ++ +++ + D S G +QGG+ V
Sbjct: 159 RKAYHVLNLYYGFGRTFFNPSSIKVFSRFDALQKAVKNYTIEATPDDRS-GVLQQGGMFV 217
Query: 225 AGPGKNNISYLHKDKEAGDDPEIEDILKACC 255
GK + Y KD+ GD ++D+ CC
Sbjct: 218 FR-GK-QLLYARKDEGTGDHAPLDDVFDVCC 246
>Glyma17g17050.3
Length = 224
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 50 STNRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRK--AVVAF 107
S H+ P S V + S +L V +F G + SDLW + AVVA
Sbjct: 41 SVTVRHSIVSPRVS--VSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVAL 98
Query: 108 ARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE-IYADPT 166
RHFGC C + A L K D++GV L+ +G G+ ++A+ AE+ F + +YADP
Sbjct: 99 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADPD 158
Query: 167 HSSYEALNFVSGVLTTFTPNAGLKIIQLY 195
+Y LN G TF + +K+ +
Sbjct: 159 RKAYHVLNLYYGFGRTFFNPSSIKVFSRF 187
>Glyma17g17050.4
Length = 189
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 50 STNRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRK--AVVAF 107
S H+ P S V + S +L V +F G + SDLW + AVVA
Sbjct: 41 SVTVRHSIVSPRVS--VSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVAL 98
Query: 108 ARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE-IYADP 165
RHFGC C + A L K D++GV L+ +G G+ ++A+ AE+ F + +YADP
Sbjct: 99 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADP 157
>Glyma02g13800.1
Length = 410
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 92 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVD-QAKA 150
+ +S+LW+D+ AV R GC++CR A L ++K + DA GV L + +D + K
Sbjct: 235 LKVSELWRDKPAVFLCLRRPGCIMCRAEAHQLYSRKAIFDALGVQLFAVLHEQIDSEVKD 294
Query: 151 FAEQTKFGGEIYADPTHSSYEAL--------NFVSGVLTTFTPNAGLKIIQLYMEGYRQD 202
F + +GG + D ++AL F+SG L P + + Y++
Sbjct: 295 FWPRY-WGGVVLLDRGRDFFKALGGGKLLKEKFLSGFL--LNPRS--------LSNYKRA 343
Query: 203 WKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDDPEIEDILKAC 254
+ + + G K GG+ + G GK+ I+Y ++ GD I ++++ C
Sbjct: 344 KAMHIDYNFKGEGEIK-GGLFIIGMGKSGIAYQFIERNFGDWAPIAEVIEIC 394
>Glyma09g24710.1
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 183 FTPNAGLK--IIQLYMEGYRQDWKLSFEKDTVSRGGW 217
F P ++ +++L +GYRQ WKLSFEKD +SRGGW
Sbjct: 245 FLPMLSIRKIVLELRQKGYRQHWKLSFEKDIISRGGW 281