Miyakogusa Predicted Gene
- Lj1g3v4554430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4554430.1 tr|I1LYU9|I1LYU9_SOYBN Arginine biosynthesis
bifunctional protein ArgJ, chloroplastic OS=Glycine
max,88.44,0,ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ,Arginine
biosynthesis protein ArgJ;
Q9ZUR7_ARATH_Q9Z,NODE_49882_length_1691_cov_21.382023.path1.1
(460 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g19450.1 747 0.0
Glyma10g05090.1 721 0.0
Glyma13g19450.2 517 e-146
Glyma0091s00210.1 99 1e-20
Glyma18g17440.1 87 4e-17
Glyma09g16520.1 58 3e-08
Glyma20g05100.1 57 6e-08
>Glyma13g19450.1
Length = 464
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/467 (80%), Positives = 399/467 (85%), Gaps = 10/467 (2%)
Query: 1 MYSCVVVPHPIFLH---KTSLNPKIFTS----MRIRAMSNQPSTYIPAAPIFLPEGPWNQ 53
MYSC+ P +FLH +S NPK F S +RIRA+S + +IPAAPIFLPEGPWNQ
Sbjct: 1 MYSCI--PQHLFLHLHLASSPNPKAFNSPLRNLRIRAVSTK-ENHIPAAPIFLPEGPWNQ 57
Query: 54 IPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKKT 113
IPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCK+T
Sbjct: 58 IPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKRT 117
Query: 114 LDISNTARAVLTNAGQANAATGEAGYQDVIECVDSLAKLLKMKPEEVLVESTGVIGQRIK 173
LDISNTARAVLTNAGQANAATG+ GYQD+IECV+SLAKLLK+KPEEVL+ESTGVIGQRIK
Sbjct: 118 LDISNTARAVLTNAGQANAATGKEGYQDMIECVESLAKLLKVKPEEVLIESTGVIGQRIK 177
Query: 174 KGALLNSLPMLVNSLSSSVEGADSAAVAITTTDLVSKSVAIESLVGGTKVRVGGMAKGSG 233
KGALLNSLP LVNSLSSSVEGADSAAVAITTTDLVSKSVAIESL+GGTKVRVGGMAKGSG
Sbjct: 178 KGALLNSLPTLVNSLSSSVEGADSAAVAITTTDLVSKSVAIESLIGGTKVRVGGMAKGSG 237
Query: 234 MIHPNMATMLGVITTDARVTSDVWRKMVKIAVNRSFNQITVDGDTSTNDTVXXXXXXXXX 293
MIHPNMATMLGVITTDAR+TSDVWRKMV++AVNRSFNQITVDGDTSTNDTV
Sbjct: 238 MIHPNMATMLGVITTDARLTSDVWRKMVQVAVNRSFNQITVDGDTSTNDTVIALASGLSG 297
Query: 294 XXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVTGANXXXXXXXXXXX 353
EAIQLQACLDAVMQGLAKSIAWDGEGATCL+EV VTGAN
Sbjct: 298 LGCISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLVEVCVTGANSEAEAAKVARS 357
Query: 354 XXXXXXXXXXXYGRDPNWGRIAAAAGYSGVSFNQNLLRVELGDILLMDGGEPQSFDRDAA 413
YGRDPNWGRIAAAAGYSGVSF+Q+LLRVELGDILLMDGGEPQ FDR AA
Sbjct: 358 VASSSLVKAAIYGRDPNWGRIAAAAGYSGVSFHQDLLRVELGDILLMDGGEPQLFDRHAA 417
Query: 414 SSYLKRAGESHGTVRIQISVGNGPGSGQAWGCDLSYDYVKINAEYTS 460
SSYL++AGE+H TV+IQISVGNGPG GQAWGCDLSYDYVKINAEYT+
Sbjct: 418 SSYLRKAGETHDTVKIQISVGNGPGRGQAWGCDLSYDYVKINAEYTT 464
>Glyma10g05090.1
Length = 430
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/433 (83%), Positives = 379/433 (87%), Gaps = 3/433 (0%)
Query: 28 IRAMSNQPSTYIPAAPIFLPEGPWNQIPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTC 87
IRA+S +IPAAP+FLPEGPWNQIPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTC
Sbjct: 1 IRAVSTT-HNHIPAAPVFLPEGPWNQIPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTC 59
Query: 88 DVDAVSAGSFTTNVVAAAPVLYCKKTLDISNTARAVLTNAGQANAATGEAGYQDVIECVD 147
DVDAVSAGSFTTNVVAAAPVLYCK+TLDISNTARAVLTNAGQANAATG+ GYQDV+ECV+
Sbjct: 60 DVDAVSAGSFTTNVVAAAPVLYCKRTLDISNTARAVLTNAGQANAATGKEGYQDVVECVE 119
Query: 148 SLAKLLKMKPEEVLVESTGVIGQRIKKGALLNSLPMLVNSLSSSVEGADSAAVAITTTDL 207
SLAKLLK+KPEEVL+ESTGVIGQRIKKGALLNSLP LVNSLSSSVEGADSAAVAITTTDL
Sbjct: 120 SLAKLLKVKPEEVLIESTGVIGQRIKKGALLNSLPTLVNSLSSSVEGADSAAVAITTTDL 179
Query: 208 VSKSVAIESLVGGTKVRVGGMAKGSGMIHPNMATMLGVITTDARVTSDVWRKMVKIAVNR 267
VSKSVAIESLVGGT+VRVGGMAKGSGMIHPNMATMLGVITTDA VTSDVWRKMV++AVNR
Sbjct: 180 VSKSVAIESLVGGTRVRVGGMAKGSGMIHPNMATMLGVITTDAWVTSDVWRKMVQVAVNR 239
Query: 268 SFNQITVDGDTSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDG 327
SFNQITVDGDTSTNDTV EAIQLQACLDAVMQGLAKSIAWDG
Sbjct: 240 SFNQITVDGDTSTNDTVIALASGLSGLGCISSLDSDEAIQLQACLDAVMQGLAKSIAWDG 299
Query: 328 EGATCLIEVTVTGANXXXXXXXXXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYSGVSFNQ 387
EGATCL+EV+VTGAN YGRDPNWGRIAAAAGYSGVSF+Q
Sbjct: 300 EGATCLVEVSVTGAN--SEAEAAKVARSVASSSLAAVYGRDPNWGRIAAAAGYSGVSFHQ 357
Query: 388 NLLRVELGDILLMDGGEPQSFDRDAASSYLKRAGESHGTVRIQISVGNGPGSGQAWGCDL 447
+LLRVELGDILLMDGGEPQ FDRD ASSYL+RAGE+H TVRIQISVGNGPG GQAWGCDL
Sbjct: 358 DLLRVELGDILLMDGGEPQLFDRDVASSYLRRAGETHDTVRIQISVGNGPGCGQAWGCDL 417
Query: 448 SYDYVKINAEYTS 460
SYDYVKINAEYT+
Sbjct: 418 SYDYVKINAEYTT 430
>Glyma13g19450.2
Length = 371
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/322 (81%), Positives = 282/322 (87%), Gaps = 10/322 (3%)
Query: 1 MYSCVVVPHPIFLH---KTSLNPKIFTS----MRIRAMSNQPSTYIPAAPIFLPEGPWNQ 53
MYSC+ P +FLH +S NPK F S +RIRA+S + + +IPAAPIFLPEGPWNQ
Sbjct: 1 MYSCI--PQHLFLHLHLASSPNPKAFNSPLRNLRIRAVSTKEN-HIPAAPIFLPEGPWNQ 57
Query: 54 IPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKKT 113
IPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCK+T
Sbjct: 58 IPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKRT 117
Query: 114 LDISNTARAVLTNAGQANAATGEAGYQDVIECVDSLAKLLKMKPEEVLVESTGVIGQRIK 173
LDISNTARAVLTNAGQANAATG+ GYQD+IECV+SLAKLLK+KPEEVL+ESTGVIGQRIK
Sbjct: 118 LDISNTARAVLTNAGQANAATGKEGYQDMIECVESLAKLLKVKPEEVLIESTGVIGQRIK 177
Query: 174 KGALLNSLPMLVNSLSSSVEGADSAAVAITTTDLVSKSVAIESLVGGTKVRVGGMAKGSG 233
KGALLNSLP LVNSLSSSVEGADSAAVAITTTDLVSKSVAIESL+GGTKVRVGGMAKGSG
Sbjct: 178 KGALLNSLPTLVNSLSSSVEGADSAAVAITTTDLVSKSVAIESLIGGTKVRVGGMAKGSG 237
Query: 234 MIHPNMATMLGVITTDARVTSDVWRKMVKIAVNRSFNQITVDGDTSTNDTVXXXXXXXXX 293
MIHPNMATMLGVITTDAR+TSDVWRKMV++AVNRSFNQITVDGDTSTNDTV
Sbjct: 238 MIHPNMATMLGVITTDARLTSDVWRKMVQVAVNRSFNQITVDGDTSTNDTVIALASGLSG 297
Query: 294 XXXXXXXXXXEAIQLQACLDAV 315
EAIQLQACLDAV
Sbjct: 298 LGCISSLDSDEAIQLQACLDAV 319
>Glyma0091s00210.1
Length = 149
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/68 (80%), Positives = 58/68 (85%), Gaps = 2/68 (2%)
Query: 197 SAAVAITTTDLVSKSVAIESLVGGTKVRVGGMAKGSGMIHPNMATMLGVITTDARVTSDV 256
SAAVAITTTDLVSKSVAIESLVGGTK++VGGMAKGSGMIHPNMATMLGV T RV+
Sbjct: 25 SAAVAITTTDLVSKSVAIESLVGGTKLKVGGMAKGSGMIHPNMATMLGVCLT-LRVSHTK 83
Query: 257 WRKM-VKI 263
KM VKI
Sbjct: 84 GTKMKVKI 91
>Glyma18g17440.1
Length = 123
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
Query: 366 GRDPNWGRIAAAAGYSGVSFNQNLLRVELGDILLMDGGEPQSFDRDAASSYLKRAGESHG 425
G +PNWGRIAAAA YSGVSF+Q+LLRVELGDILLM GGEPQ FD RAG H
Sbjct: 37 GNNPNWGRIAAAACYSGVSFHQDLLRVELGDILLMYGGEPQLFD---------RAGLHHT 87
Query: 426 TVRIQISVGNGPG 438
T R + PG
Sbjct: 88 TCRNRSRARCSPG 100
>Glyma09g16520.1
Length = 190
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 218 VGGTKVRVGGMAKGSGMIHPNMATMLGV--ITTDARVTSDVWRKMV 261
VGGTK++VGGMAKGSGMIHPNMATMLG+ I +V W K +
Sbjct: 106 VGGTKLKVGGMAKGSGMIHPNMATMLGMDHICLILKVRVLHWLKKI 151
>Glyma20g05100.1
Length = 27
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 218 VGGTKVRVGGMAKGSGMIHPNMATMLG 244
VGGTKVRVGGMAKGSGMIHPNMATMLG
Sbjct: 1 VGGTKVRVGGMAKGSGMIHPNMATMLG 27