Miyakogusa Predicted Gene

Lj1g3v4552380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4552380.1 tr|B9HBE4|B9HBE4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_560728 PE=4
SV=1,43.75,5e-18,seg,NULL,CUFF.32639.1
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g32970.1                                                       216   2e-56
Glyma19g35680.1                                                       200   1e-51
Glyma10g05100.1                                                       178   5e-45
Glyma13g19460.1                                                       105   4e-23

>Glyma03g32970.1 
          Length = 257

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/255 (50%), Positives = 153/255 (60%), Gaps = 6/255 (2%)

Query: 1   MDMCSRVPDVHN-NLLSNLESTSHESLHVDDALKSELATEGNGVCDVGEENLSGGVKQQE 59
           MD CS    VH+ N +SNL  T  ESLH+ DA KS LA+EG+ + +V EE +   +K Q 
Sbjct: 4   MDTCSNTNVVHDDNFISNLGRTFSESLHIQDAQKSLLASEGSDIYNVNEEKICKAMKDQA 63

Query: 60  TKLNMICLTKSATFPIPH-MMXXXXXXXXXXXXVAKSNSEQSASQTYSRSVSLPAP-ELI 117
           TK+NM CL KSATFPIP+ M+            V +   E SA QTYSRSVSLPAP +LI
Sbjct: 64  TKVNMACLKKSATFPIPNTMLPSSSSDKEADTSVTEPLYEHSAHQTYSRSVSLPAPLKLI 123

Query: 118 PALKGSREKYRGSPMKLTVKWAPDVYDPVPTLMSHTVXXXXXXXXXXXXXXXXXXXXXXX 177
           PA+KGSREK+ GS +KL VKWA DVYDPVPTL+SHTV                       
Sbjct: 124 PAIKGSREKHGGSQVKLNVKWAADVYDPVPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQ 183

Query: 178 XXXXXXXXXXXXXXXXARKQGGHSDLSFESLDSHDNVTGT-SELDALDVRSHDSFCGTSF 236
                            RK GG S L ++S+DS D V G  +ELDALDVRS DS+CGTSF
Sbjct: 184 KGNSSRGGSSKDKQF--RKLGGTSGLCYKSMDSCDKVLGVATELDALDVRSQDSYCGTSF 241

Query: 237 LKNSVTKVHSLVAEA 251
           LK SVT++H  VAEA
Sbjct: 242 LKKSVTELHYSVAEA 256


>Glyma19g35680.1 
          Length = 254

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/255 (48%), Positives = 148/255 (58%), Gaps = 6/255 (2%)

Query: 1   MDMCSRVPDV-HNNLLSNLESTSHESLHVDDALKSELATEGNGVCDVGEENLSGGVKQQE 59
           MD CS    V  +N +SNL  T +ESL + DA KS LA+E N + +V EE L   +K QE
Sbjct: 1   MDTCSNTNVVLDDNFISNLGRTFNESLQIQDAHKSVLASEENDIYNVNEEKLCEAMKDQE 60

Query: 60  TKLNMICLTKSATFPIPH-MMXXXXXXXXXXXXVAKSNSEQSASQTYSRSVSLPAP-ELI 117
           T +NM CL KSATFPIP+ M+            V    +E SA QTYS SVS PAP +LI
Sbjct: 61  TNINMTCLKKSATFPIPNTMLPSSPSDKEADTSVTGPLNEHSAHQTYSLSVSPPAPLKLI 120

Query: 118 PALKGSREKYRGSPMKLTVKWAPDVYDPVPTLMSHTVXXXXXXXXXXXXXXXXXXXXXXX 177
            A+KGSREK+ GS +KL VKWA DVYDP+PTL+SHTV                       
Sbjct: 121 SAMKGSREKHGGSQVKLNVKWASDVYDPIPTLLSHTV--RSNKKQQKSRKKKPEKKNGKK 178

Query: 178 XXXXXXXXXXXXXXXXARKQGGHSDLSFESLDSHDNVTGTS-ELDALDVRSHDSFCGTSF 236
                            RK GG S L ++S+DS D V G S ELDAL+VRS DS+CGTSF
Sbjct: 179 GQKGNSSRGGSNKDKQVRKLGGTSGLCYKSMDSCDKVLGASTELDALEVRSQDSYCGTSF 238

Query: 237 LKNSVTKVHSLVAEA 251
           LK SVT+VH  VAEA
Sbjct: 239 LKKSVTEVHYSVAEA 253


>Glyma10g05100.1 
          Length = 239

 Score =  178 bits (452), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/257 (45%), Positives = 141/257 (54%), Gaps = 25/257 (9%)

Query: 1   MDMCSRVPDVHNNLLSNLESTSHESLHVDDALKSELATEGN--GVCDVGEENLSGGVKQQ 58
           MD  S V  VH+N++S LE T  ESLH+ DA  SE A+EG+  G CDVGE NL  G + Q
Sbjct: 1   MDTRSPVNAVHDNIISKLEVTFSESLHIHDAQNSEHASEGDHIGNCDVGERNLREGFELQ 60

Query: 59  ETKLNMICLTKSATFPIPHMMXXXXXXXXXXXXVAKSNSEQSASQTYSRSVSLPAP-ELI 117
           ETKL + CL + +TFP P MM             A S S+QS  Q YS SVSLPAP +L+
Sbjct: 61  ETKLEIKCLKECSTFPYPDMMLPSSSSDEEAD--ASSPSKQSPRQNYSCSVSLPAPRKLV 118

Query: 118 PALKGSREKYRGSPMKLTVKWAPDVYDPVPTLMSHTVXXXXXXXXXXXXXXXXXXXXXXX 177
            A+KGSREK RGS MKLTVKWAPDVYDPVPTL+SHTV                       
Sbjct: 119 SAMKGSREKERGSQMKLTVKWAPDVYDPVPTLLSHTVKNKKQQKPRIKKSEKKNGKKGQK 178

Query: 178 XXXXXXXXXXXXXXXXARKQGGHSDLSFES--LDSHDNVTGTSELDALDVRSHDSFCGTS 235
                             K+G   D  + +    SHD V   S  +A +   HDS+CGTS
Sbjct: 179 VSYS--------------KRGSSKDKQYRNRWFYSHDEVFEASSDNAAN---HDSYCGTS 221

Query: 236 -FLKNSVTKVHSLVAEA 251
            +L+ S+TKVH  + EA
Sbjct: 222 YYLETSLTKVHWSIGEA 238


>Glyma13g19460.1 
          Length = 235

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 116/258 (44%), Gaps = 39/258 (15%)

Query: 1   MDMCSRVPDVHNNLLSNLESTSHESLHVDDALKSELATEGN--GVCDVGEENLSGGVKQQ 58
           MD  S V  V++N++  LE T  ESLH++DA KSE A+EG+  G C VGE NL G    +
Sbjct: 2   MDTRSPVNAVYDNIIGKLEGTFSESLHINDAQKSEHASEGDHIGNCAVGEVNLRGARLMR 61

Query: 59  ETKLNMICLTKSATFPIPHMMXXXXXXXXXXXXVAKSNSEQSASQTYSRSVSLPAPELIP 118
                           + H +              KS   ++ S  Y  +     P+ + 
Sbjct: 62  RL--------------MHHPLSSLHAKTTRAQYFTKSVHHRALSTCYQNA----PPKHVY 103

Query: 119 ALKGSREKYRGSPMKLTVKWAPDVYDPVPTLMSHTVXXXXXXXXXXXXXXXXXXXXXXXX 178
           A+KG REK  GS MKLTV WAPDV DPVPTL+SHTV                        
Sbjct: 104 AMKGGREKEGGSQMKLTVTWAPDVSDPVPTLLSHTVKNKKQQKPRIKKSQKKNGKGQKVS 163

Query: 179 XXXXXXXXXXXXXXXARKQGGHSDLSFES--LDSHDNV-TGTSELDALDVRSHDSFCGTS 235
                            K+G      + +  L SHD V   +SELD L+  +HDS+ GTS
Sbjct: 164 YS---------------KRGSSKGKLYRNRWLHSHDEVFEASSELDDLNAVNHDSYYGTS 208

Query: 236 -FLKNSVTKVHSLVAEAQ 252
            +LK S T+  + + E +
Sbjct: 209 YYLKTSFTQRFTGLLETR 226