Miyakogusa Predicted Gene

Lj1g3v4551280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4551280.1 CUFF.32641.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g32930.1                                                       134   2e-32
Glyma19g35640.1                                                       119   7e-28
Glyma10g05040.1                                                        90   5e-19
Glyma13g19400.1                                                        69   9e-13
Glyma13g40910.1                                                        58   3e-09

>Glyma03g32930.1 
          Length = 123

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 2/119 (1%)

Query: 4   WLSELFHWRLTTPWPILAYAATWMTLLTVTVAVASISPQVAFVTGVSPSSSFSQKCRADG 63
           W S +   R+   WP+L YAATW+TLL + VA AS+SPQVAFV+ ++PSS FSQKC + G
Sbjct: 5   WFSNMV--RMHLSWPVLTYAATWITLLMLMVAAASMSPQVAFVSAITPSSKFSQKCSSGG 62

Query: 64  SIRIPLDLPGEILCFPASMFMKSKIDLILPPXXXXXXXXXXXXXXXXXGLREHDQTHPD 122
           SIR+PLD+PG+ILCFPA MF++SK+DLI+PP                 GL EHDQT  D
Sbjct: 63  SIRMPLDVPGDILCFPAHMFVRSKVDLIVPPVFAAVIVAASACVVRAVGLWEHDQTPSD 121


>Glyma19g35640.1 
          Length = 123

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 2/121 (1%)

Query: 4   WLSELFHWRLTTPWPILAYAATWMTLLTVTVAVASISPQVAFVTGVSPSSSFSQKCRADG 63
           W S L   R+   WP+L YAATW+ LLT+TVAVAS+SPQVAFV+ ++PSSSFSQKC + G
Sbjct: 5   WFSNLV--RMHLSWPVLTYAATWIILLTLTVAVASMSPQVAFVSAITPSSSFSQKCSSGG 62

Query: 64  SIRIPLDLPGEILCFPASMFMKSKIDLILPPXXXXXXXXXXXXXXXXXGLREHDQTHPDD 123
           SIR+PLD+PG+ILCFPA +F++SK+DLI+PP                 GL EHDQT  + 
Sbjct: 63  SIRMPLDVPGDILCFPAHIFVRSKVDLIVPPVFAAVIVAASACVVRAVGLWEHDQTSSNA 122

Query: 124 Q 124
            
Sbjct: 123 N 123


>Glyma10g05040.1 
          Length = 108

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 15/120 (12%)

Query: 1   MSHWLSELFHWRLTTPWPILAYAATWMTLLTVTVAVASISPQVAFVTGVSPSSSFSQKCR 60
           M  WLS          WP+L YAATW+T++T TVAVAS+S +VAFV+ +S     S+KC+
Sbjct: 1   MFLWLSNFIR-----SWPLLIYAATWVTVMTFTVAVASLSTEVAFVSAISS----SEKCK 51

Query: 61  ADGS---IRIPLDLPGEILCFPASMFMKSKIDLILPPXXXXXXXXXXXXXXXXXGLREHD 117
           +DGS   +R+P++   E  CFPA +F KS ID+I+PP                 GL EHD
Sbjct: 52  SDGSLVRVRVPVE---ETPCFPAHLFTKSHIDVIVPPIFAALVVAASACVVKVVGLWEHD 108


>Glyma13g19400.1 
          Length = 86

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 10/92 (10%)

Query: 29  LLTVTVAVASISPQVAFVTGVSPSSSFSQKCRADGS---IRIPLDLPGEILCFPASMFMK 85
           ++T TVAVAS+S +VAFV+ +S S    +KC++DGS   +R+PL+   E  CFPA +F K
Sbjct: 2   VMTFTVAVASLSTEVAFVSAISSS----EKCKSDGSLVRVRVPLE---ETPCFPAHLFTK 54

Query: 86  SKIDLILPPXXXXXXXXXXXXXXXXXGLREHD 117
           S ID+I+PP                 GL EHD
Sbjct: 55  SHIDVIVPPIFAALIVVASACVVTVVGLWEHD 86


>Glyma13g40910.1 
          Length = 104

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 5/81 (6%)

Query: 14 TTPWPILAYAATWMTLLTVTVAVASISPQVAFVTGVSPSSSFSQKCRADGSIRIPLDLPG 73
          T P P+L  A TW  LL VTV + S++  VAFV  +SPSSSFS+ C     +RIPLD P 
Sbjct: 11 TVPSPLL-NAVTWTLLLIVTVVLVSLATGVAFVLAISPSSSFSKPC---NGVRIPLDFPR 66

Query: 74 EILCFPASMFM-KSKIDLILP 93
          E++C P    M  S++D  LP
Sbjct: 67 EMVCLPEHAVMSSSRLDFFLP 87