Miyakogusa Predicted Gene

Lj1g3v4528350.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4528350.2 Non Chatacterized Hit- tr|D8SDC7|D8SDC7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.09,4e-17,Coa1,Cytochrome oxidase assembly protein
1,CUFF.32558.2
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g35170.2                                                       309   8e-85
Glyma19g35170.1                                                       309   8e-85
Glyma03g32440.1                                                       293   8e-80

>Glyma19g35170.2 
          Length = 194

 Score =  309 bits (792), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 144/179 (80%), Positives = 158/179 (88%)

Query: 1   MLAKRLGSFFKLSPKPQVSSSTRSVDEEKSKYYGRKAVQFLLITTTGGVALSALDDLAIY 60
           MLAKRL SFFKLSPKPQ+S+ST+ VDEE  KYYG+KAV F LIT TGGVALSALDDLAIY
Sbjct: 1   MLAKRLSSFFKLSPKPQISTSTKKVDEETGKYYGKKAVSFFLITITGGVALSALDDLAIY 60

Query: 61  HSCSSKAMEKVSKNQAVIDAIGEPIVKGSWYNASLAVAHKRHSVSCSFPVSGPQGTGLLQ 120
           H CS KAMEKVSKNQA+IDAIGEPIVKG WYNASL+VAHKRHSVSCSFPVSGPQGTG+LQ
Sbjct: 61  HGCSRKAMEKVSKNQALIDAIGEPIVKGPWYNASLSVAHKRHSVSCSFPVSGPQGTGVLQ 120

Query: 121 LKAVRNGDDSWSSYYLARDWDILIMDALLHVPGNEERHRTFRINISDNLPPSPACPECV 179
           LKAVRNGDD+WSS++L RDWDILIMDALLHVPGNEE+H+T RIN++D       C EC 
Sbjct: 121 LKAVRNGDDTWSSFFLPRDWDILIMDALLHVPGNEEKHQTLRINLADKPLSCTTCTECT 179


>Glyma19g35170.1 
          Length = 194

 Score =  309 bits (792), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 144/179 (80%), Positives = 158/179 (88%)

Query: 1   MLAKRLGSFFKLSPKPQVSSSTRSVDEEKSKYYGRKAVQFLLITTTGGVALSALDDLAIY 60
           MLAKRL SFFKLSPKPQ+S+ST+ VDEE  KYYG+KAV F LIT TGGVALSALDDLAIY
Sbjct: 1   MLAKRLSSFFKLSPKPQISTSTKKVDEETGKYYGKKAVSFFLITITGGVALSALDDLAIY 60

Query: 61  HSCSSKAMEKVSKNQAVIDAIGEPIVKGSWYNASLAVAHKRHSVSCSFPVSGPQGTGLLQ 120
           H CS KAMEKVSKNQA+IDAIGEPIVKG WYNASL+VAHKRHSVSCSFPVSGPQGTG+LQ
Sbjct: 61  HGCSRKAMEKVSKNQALIDAIGEPIVKGPWYNASLSVAHKRHSVSCSFPVSGPQGTGVLQ 120

Query: 121 LKAVRNGDDSWSSYYLARDWDILIMDALLHVPGNEERHRTFRINISDNLPPSPACPECV 179
           LKAVRNGDD+WSS++L RDWDILIMDALLHVPGNEE+H+T RIN++D       C EC 
Sbjct: 121 LKAVRNGDDTWSSFFLPRDWDILIMDALLHVPGNEEKHQTLRINLADKPLSCTTCTECT 179


>Glyma03g32440.1 
          Length = 193

 Score =  293 bits (749), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 139/177 (78%), Positives = 155/177 (87%), Gaps = 1/177 (0%)

Query: 1   MLAKRLGSFFKLSPKPQVSSSTRSVDEEKSKYYGRKAVQFLLITTTGGVALSALDDLAIY 60
           MLAKRL SFFKLSPKPQ+S+S + VDEE  KYYGRKAV F+LIT TGGVALSALDDLAIY
Sbjct: 1   MLAKRLSSFFKLSPKPQISTSMKKVDEETGKYYGRKAVSFVLITITGGVALSALDDLAIY 60

Query: 61  HSCSSKAMEKVSKNQAVIDAIGEPIVKGSWYNASLAVAHKRHSVSCSFPVSGPQGTGLLQ 120
           H CSSKAMEKVSKNQA+ID+IGEPIVKG WYNASLAVAH+R SVSCSFPVSGPQG G+LQ
Sbjct: 61  HGCSSKAMEKVSKNQAIIDSIGEPIVKGPWYNASLAVAHERRSVSCSFPVSGPQGNGVLQ 120

Query: 121 LKAVRNGDDSWSSYYLARDWDILIMDALLHVPGNEERHRTFRINISDNLPPSPACPE 177
           LKAVRNGDD+WSS++L RDWDILIMDALLH+P N E+HRT RIN++D      AC +
Sbjct: 121 LKAVRNGDDTWSSFFLPRDWDILIMDALLHIPEN-EKHRTLRINLADKPLSCTACTD 176