Miyakogusa Predicted Gene

Lj1g3v4516120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4516120.1 CUFF.32575.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g35110.1                                                       280   3e-76
Glyma13g18830.1                                                       280   3e-76
Glyma10g04560.1                                                       280   3e-76
Glyma03g32380.1                                                       280   3e-76
Glyma20g21430.1                                                       134   2e-32
Glyma05g00310.1                                                       117   3e-27
Glyma10g27010.1                                                        78   3e-15
Glyma17g08750.1                                                        55   2e-08

>Glyma19g35110.1 
          Length = 140

 Score =  280 bits (716), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/140 (99%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140


>Glyma13g18830.1 
          Length = 140

 Score =  280 bits (716), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/140 (99%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140


>Glyma10g04560.1 
          Length = 140

 Score =  280 bits (716), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/140 (99%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140


>Glyma03g32380.1 
          Length = 140

 Score =  280 bits (716), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/140 (99%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140


>Glyma20g21430.1 
          Length = 85

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 67/71 (94%)

Query: 29 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPW 88
           DNTGAKNLYIISVKGIKGRLNRLP ACVGD+VMATVKKGKP+LRKKVLPAVIVRQR PW
Sbjct: 14 CDNTGAKNLYIISVKGIKGRLNRLPYACVGDLVMATVKKGKPNLRKKVLPAVIVRQRNPW 73

Query: 89 RRKDGVFMYFE 99
          RRKDG +MYFE
Sbjct: 74 RRKDGAYMYFE 84


>Glyma05g00310.1 
          Length = 78

 Score =  117 bits (294), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 62/79 (78%), Gaps = 1/79 (1%)

Query: 62  MATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPI 121
           MATVKKGKPDLRK VLP VIV Q +PW RKDGV   F     V VNPKGEMKGS ITGPI
Sbjct: 1   MATVKKGKPDLRK-VLPVVIVLQHRPWHRKDGVLHAFRRLCWVTVNPKGEMKGSTITGPI 59

Query: 122 GKECADLWPRIASAANAIV 140
           GKECA+LWPRIA  ANAIV
Sbjct: 60  GKECANLWPRIARVANAIV 78


>Glyma10g27010.1 
          Length = 135

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 33/98 (33%)

Query: 1  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
          MSKRG GGSAGNKFRMSLGLPVAA +NCADNT                            
Sbjct: 1  MSKRGSGGSAGNKFRMSLGLPVAAVLNCADNT---------------------------- 32

Query: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYF 98
                +G    RKKVLPAV+VRQRKP      + + F
Sbjct: 33 -----YRGSLIFRKKVLPAVVVRQRKPCESLQFILLVF 65


>Glyma17g08750.1 
          Length = 35

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 29/44 (65%), Gaps = 10/44 (22%)

Query: 60  MVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAG 103
           M M TVKKGKPDLRK          RKPW  KDGV+MYFEDN G
Sbjct: 1   MFMDTVKKGKPDLRK----------RKPWHPKDGVYMYFEDNVG 34