Miyakogusa Predicted Gene

Lj1g3v4483920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483920.1 Non Chatacterized Hit- tr|B9SWI6|B9SWI6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,39.52,4e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.32493.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32820.1                                                       107   7e-24
Glyma03g29920.1                                                        82   4e-16
Glyma14g05540.1                                                        56   2e-08

>Glyma19g32820.1 
          Length = 510

 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 82/127 (64%), Gaps = 6/127 (4%)

Query: 8   KLKAYEELGVAASTLVDAVAASPSLLVGDVDLDFVKVVEKLKEHFVAKGGGWVEEHFLD- 66
           KL+ YE+LGVA  TL   VA+SP +LVG VD+ FVKVVEKLK   V K   W+ E+ LD 
Sbjct: 128 KLRDYEKLGVARRTLACVVASSPCILVGGVDVGFVKVVEKLK-GVVGKDVDWIGENLLDM 186

Query: 67  --GGVYCNWGMVLRLLCLLSEVGFREGHIDDELIRDRPCVVFHESGGRALSLIAFLSKFG 124
                 C+W +VL +LCLL  V + E  + D  IR  P VVF +SGG  LSLI FL KFG
Sbjct: 187 LSDQGCCDWRIVLHVLCLLDRV-YSEEQLGDFFIR-HPSVVFEDSGGSVLSLINFLFKFG 244

Query: 125 LSVDRIG 131
           LS+D++ 
Sbjct: 245 LSLDQVS 251


>Glyma03g29920.1 
          Length = 334

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 63/116 (54%), Gaps = 24/116 (20%)

Query: 16  GVAASTLVDAVAASPSLLVGDVDLDFVKVVEKLKEHFVAKGGGWVEEHFLDGGVYCNWGM 75
           GVA   L   +A+SP +LVG VDLDFV+VVEKLK   V K G  +     D G  CNW +
Sbjct: 111 GVAPRMLTCVIASSPCILVGGVDLDFVRVVEKLK-GVVGKDGENLLNVLDDQGC-CNWRI 168

Query: 76  VLRLLCLLSEVGFREGHIDDELIRDRPCVVFHESGGRALSLIAFLSKFGLSVDRIG 131
           VL +LCLL+                       ESGG  LSLI FL KFGLSVDR+ 
Sbjct: 169 VLHVLCLLA----------------------RESGGSVLSLINFLFKFGLSVDRVA 202


>Glyma14g05540.1 
          Length = 512

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 8   KLKAYEELGVAASTLVDAVAASPSLLVGDVDLDFVKVVEKLKEHFVAKGGGWVEEHFLDG 67
           KL+AYE LG+  ST+V  V   P LLVGDV+ +FV V++ LK   +     W+  +    
Sbjct: 147 KLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKR--IGIESDWMVNYLSCS 204

Query: 68  GVYCNWGMVLRLLCLLSEVGFREGHIDDELIRDRPCVVFHESGGRALSLIAFLSKFGLSV 127
             Y +W  +L  +  L +VG+ E  + + L R+ P ++    G +   +   L K G+ +
Sbjct: 205 RTY-SWKRMLDAMLFLHKVGYSEEQMHN-LFRENPKLLLEGFGRKVYLVFGRLLKVGVEM 262

Query: 128 D 128
           +
Sbjct: 263 N 263