Miyakogusa Predicted Gene
- Lj1g3v4483360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4483360.1 Non Chatacterized Hit- tr|B9S4W1|B9S4W1_RICCO
Nucleic acid binding protein, putative OS=Ricinus comm,41.94,2e-19,no
description,Zinc finger C2H2-type/integrase DNA-binding domain;
seg,NULL; ZINC_FINGER_C2H2_2,Zinc,CUFF.32451.1
(149 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g34540.1 133 6e-32
Glyma03g31780.1 132 2e-31
Glyma13g18160.1 97 7e-21
Glyma20g34840.1 92 3e-19
Glyma10g32810.1 89 2e-18
Glyma10g04010.1 70 1e-12
Glyma12g06340.1 69 2e-12
Glyma18g40360.1 66 2e-11
Glyma09g13810.1 62 3e-10
Glyma11g14400.1 61 5e-10
Glyma07g16290.1 60 8e-10
Glyma03g11960.1 56 1e-08
Glyma07g16300.1 56 1e-08
Glyma05g23620.1 56 2e-08
Glyma01g24820.1 55 3e-08
Glyma18g40370.1 55 3e-08
Glyma11g04640.1 55 3e-08
Glyma10g03990.1 55 4e-08
Glyma14g07220.1 54 7e-08
Glyma13g18150.1 54 8e-08
Glyma18g04030.1 53 9e-08
Glyma04g13050.1 53 1e-07
Glyma12g35930.1 53 1e-07
Glyma03g31760.1 52 2e-07
Glyma13g34450.1 51 4e-07
Glyma02g41740.1 51 5e-07
Glyma17g16690.1 50 8e-07
Glyma19g33260.1 47 6e-06
>Glyma19g34540.1
Length = 174
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 97/159 (61%), Gaps = 34/159 (21%)
Query: 22 DDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKP------SFPNKVDD-SNY 74
+D G GRSYECIFCKRGFTTAQALGGHMNIHRK++ NK+K S N VD +NY
Sbjct: 19 NDDMGIGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKASFSSHPSSSNNVDGINNY 78
Query: 75 AELGFYSEVSNHPQGGNNYYANNYHQVYFPATRASNI----------ENQ-------QDW 117
A+LGFYS++ P AN+Y +V+FP S I ENQ QDW
Sbjct: 79 ADLGFYSQI---PSLSTAPDANSYREVFFPTAAPSVIRPSSHEVLCVENQRGHHVFEQDW 135
Query: 118 RQRNLSLYGNPF---SVRDNAED----GLDLELRLGRHP 149
R+RNLSLY NP ++D E+ GLDLELRLG HP
Sbjct: 136 RKRNLSLYTNPLGFHEIKDKFEESEDNGLDLELRLGHHP 174
>Glyma03g31780.1
Length = 178
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 100/161 (62%), Gaps = 34/161 (21%)
Query: 22 DDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSK------PSFPNKVDD-SNY 74
+D G GRSYECI+CKRGFTTAQALGGHMNIHRK++ NK+K S N VDD +NY
Sbjct: 19 NDDMGIGRSYECIYCKRGFTTAQALGGHMNIHRKERANKTKPSFQPPSSSSNNVDDINNY 78
Query: 75 AELGFYSEVSNHPQGGNNYYANNYHQVYFPATRASN-----------IENQ-------QD 116
A+LGFYS++S+ AN+Y +V+FP T AS+ +ENQ QD
Sbjct: 79 ADLGFYSQISSLSSTA-PIDANSYREVFFPTTTASSVRPSSHGEVLCVENQRGHHVFEQD 137
Query: 117 WRQRNLSLYG-NPFS-------VRDNAEDGLDLELRLGRHP 149
WR+RNLSLY NP ++ E+GLDLELRLG P
Sbjct: 138 WRKRNLSLYSTNPLCFHEIKDKFEESEENGLDLELRLGYLP 178
>Glyma13g18160.1
Length = 123
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 73/134 (54%), Gaps = 42/134 (31%)
Query: 23 DTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV-NKSKPSFP----NKVDDSNYAEL 77
D G GRSYEC+FCKRGFTTAQALGGHMNIHRKD+ NK+KP+FP +KV D NY+
Sbjct: 25 DETGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNKAKPNFPPSSSSKV-DVNYS-- 81
Query: 78 GFYSEVSNHPQGGNNYYANNYHQVYFP--ATRASNIENQQDWRQRNLSLYGNPFSVRDNA 135
YHQ+YFP A A + + Q +S
Sbjct: 82 -------------------YYHQLYFPSHACGAKSPSHVQ-------------YSSEVFE 109
Query: 136 EDGLDLELRLGRHP 149
ED LDLELRLG HP
Sbjct: 110 EDDLDLELRLGHHP 123
>Glyma20g34840.1
Length = 174
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 27/154 (17%)
Query: 21 NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSK------PSFPNKVDDSNY 74
+DDT G RSYEC FCKRGFT AQALGGHMNIHRKD+ + PS NK ++ +
Sbjct: 22 DDDTGGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQFTIDASPSV-NKFNNDDS 80
Query: 75 AELGFYSEVSNHPQGGNNYYANNYHQVYFPA----------TRASNIENQQDWRQRNLSL 124
L F SE+ N P NYY+ Q+ F +R+ + Q NLSL
Sbjct: 81 TALPFVSEIMNQPTKP-NYYSLLESQMNFQPPHAFYYEFCNSRSQPLSLNQGLHGANLSL 139
Query: 125 YGNPFSVRDNAE---------DGLDLELRLGRHP 149
P V DN +DLELRLG P
Sbjct: 140 QIGPSHVDDNIHQFRRGNQKTSEVDLELRLGHDP 173
>Glyma10g32810.1
Length = 160
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 77/154 (50%), Gaps = 27/154 (17%)
Query: 22 DDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSK------PSFPNKVDDSN-- 73
DDT G RSYEC FCKRGFT AQALGGHMNIHR+D+ + PS NK + +N
Sbjct: 7 DDTGGTKRSYECTFCKRGFTNAQALGGHMNIHRRDRAKAKQFTLDASPSV-NKFNSNNND 65
Query: 74 YAELGFYSEVSNHPQGGN--------NYYANNYHQVYFPATRASNIE-NQQDWRQRNLSL 124
L F SE+ N P N N++ + F +R+ + N Q+ R NLSL
Sbjct: 66 SMALPFVSEIMNQPTRPNYSPLESQMNFHPPHAFYYEFCNSRSQPLSLNNQELRDANLSL 125
Query: 125 YGNPFSVRDNA---------EDGLDLELRLGRHP 149
V DN E +DLELRLG P
Sbjct: 126 QIGSSHVDDNIHQVRRGNQKESEVDLELRLGHDP 159
>Glyma10g04010.1
Length = 145
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 72/146 (49%), Gaps = 47/146 (32%)
Query: 50 MNIHRKDKVN--KSKPSFP----NKVD---DSNYAELGFY-------SEVSNHPQGGNNY 93
MNIHRK + N K+KP+FP +KVD +NYA + S + +H + +
Sbjct: 1 MNIHRKARANNSKAKPNFPPSSSSKVDHHESNNYANPSYLTRGNHYSSTLPDHREVDDVN 60
Query: 94 YANNYHQVYFPA--------------TRASNIENQ--------QDWRQRNLSLYGNPFSV 131
Y N YHQ+YFP+ + +ENQ QDWRQR LSLY NP V
Sbjct: 61 Y-NYYHQLYFPSPACGAKSPSHVQYSSEVLCVENQRDPHLLFGQDWRQRGLSLYTNPLCV 119
Query: 132 RDNA--------EDGLDLELRLGRHP 149
+N ED LDLELRLG HP
Sbjct: 120 HENKDKIENNSEEDDLDLELRLGYHP 145
>Glyma12g06340.1
Length = 164
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 27 AGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGFYSEVSNH 86
RSYEC FC+RGF+ AQALGGHMNIHRKDK K K + + A+ G E SN
Sbjct: 27 TSRSYECNFCRRGFSNAQALGGHMNIHRKDKA-KLKQQQSSNQIQQDPAKSG--GEESNK 83
Query: 87 PQGGNN-----YYANNYHQVYFPATRASNIENQQDWRQRNLSLYGNPFSVRDNAEDGLDL 141
P N + + HQ+ A ++ E Q+ Q + S ++ LDL
Sbjct: 84 PNWNWNVSPQEHVIHKRHQLPLFAETPTSSETQKPQGQTQTTTEQTLLSTHQDSSSELDL 143
Query: 142 ELRLGRHP 149
ELRLG P
Sbjct: 144 ELRLGPEP 151
>Glyma18g40360.1
Length = 180
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 66/152 (43%), Gaps = 38/152 (25%)
Query: 21 NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGF- 79
N G G+SY C FCKRGF+ AQALGGHMNIHRKD+ K K S + N L
Sbjct: 32 NQGGPGQGKSYSCYFCKRGFSNAQALGGHMNIHRKDRAAKLKQS-----SEENLLSLDIS 86
Query: 80 YSEVSNHPQGGNNYYANNYHQVYFPATRASNIENQQDWRQRNLSLYGNPFSVRDNAED-- 137
S+HP +++ ++ F + ++ RN N F +D+ D
Sbjct: 87 IKATSDHPNDPSDFEE----KILF------RLGAGEEKHPRNHKYPFNFFPRKDDHHDHA 136
Query: 138 --------------------GLDLELRLGRHP 149
LDLELRLG HP
Sbjct: 137 PQIPHLPSFVLGQMVEEKKAELDLELRLGLHP 168
>Glyma09g13810.1
Length = 81
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 22 DDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDK 57
DDT+G RS EC FCKRG T AQA GGHMNIHR D+
Sbjct: 4 DDTSGTKRSQECTFCKRGLTNAQASGGHMNIHRNDR 39
>Glyma11g14400.1
Length = 168
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGFYSEVSNHPQ 88
RS+EC FC+RGF+ AQALGGHMNIHRKDK K K + + A+ Y E SN Q
Sbjct: 32 RSFECNFCRRGFSNAQALGGHMNIHRKDKA-KLKQQQSSNQIQQDQAK--SYGEDSN-KQ 87
Query: 89 GGNNYYANNYHQVY-------FPATRASNIENQQDWRQRNLSLYGNPFSVRDNAEDGLDL 141
N + H ++ F + S+ + Q + S +D++ + LDL
Sbjct: 88 KWNWNVSLQEHAIHKRQQLPLFAESPTSSETQKPQQGQTQTTTEQASLSTQDSSSE-LDL 146
Query: 142 ELRLGRHP 149
ELRLG P
Sbjct: 147 ELRLGPEP 154
>Glyma07g16290.1
Length = 159
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 67/139 (48%), Gaps = 31/139 (22%)
Query: 21 NDDTAGAGR-SYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGF 79
+DD AG G+ Y C FC+RGF+ AQALGGHMNIHR+D+ K K S K+
Sbjct: 30 SDDQAGPGQVKYSCSFCQRGFSNAQALGGHMNIHRRDRA-KLKQSAEEKL---------L 79
Query: 80 YSEVSNHPQGGNNYYANNYHQVYFPATRASNIENQQDWRQRNLSLYGNPFSV-------- 131
++S G N ++ + F R E +Q RN + PFS
Sbjct: 80 SLDISIKTTGDPNDPSDLEEKFLF---RLGAGEEKQ---ARN---HKYPFSFPHKDDHHG 130
Query: 132 -RDNAEDGLDLELRLGRHP 149
AE LDLELRLG HP
Sbjct: 131 HEKTAE--LDLELRLGLHP 147
>Glyma03g11960.1
Length = 308
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVN-KSKPSFPN 67
RSY C FC+R F +AQALGGHMN+HR+D+ K +PS P+
Sbjct: 43 RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPH 82
>Glyma07g16300.1
Length = 305
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFP 66
RSY C FC+R F +AQALGGHMN+HR+D+ +P P
Sbjct: 55 RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPYSP 92
>Glyma05g23620.1
Length = 214
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFP 66
T RSY C FC++ F +AQALGGHMN+HR+D+ + S P
Sbjct: 34 TTWPPRSYSCTFCRKEFRSAQALGGHMNVHRRDRARLHQASVP 76
>Glyma01g24820.1
Length = 313
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVN-KSKPSFPN 67
RSY C FC+R F +AQALGGHMN+HR+D+ K +P+ P+
Sbjct: 52 RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPTSPH 91
>Glyma18g40370.1
Length = 303
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNK 68
RSY C FC++ F +AQALGGHMN+HR+D+ +P P++
Sbjct: 54 RSYSCRFCRKEFRSAQALGGHMNVHRRDRARLKQPYSPDQ 93
>Glyma11g04640.1
Length = 207
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFP 66
T RSY C FC+R F +AQALGGHMN+HR+D+ + P
Sbjct: 36 TTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPVP 78
>Glyma10g03990.1
Length = 206
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
T+ R+Y C FCKR F +AQALGGHMN+HR+D+
Sbjct: 29 TSWPARNYACSFCKREFRSAQALGGHMNVHRRDRA 63
>Glyma14g07220.1
Length = 259
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
RSY C FC R F +AQALGGHMNIHR+D+
Sbjct: 61 RSYSCTFCTRDFKSAQALGGHMNIHRRDRA 90
>Glyma13g18150.1
Length = 198
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
T R+Y C FCKR F +AQALGGHMN+HR+D+
Sbjct: 28 TPWPARNYACSFCKREFRSAQALGGHMNVHRRDRA 62
>Glyma18g04030.1
Length = 235
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKD--KVNKSKPSFPNKVDDSNYAELGFYSEVSNH 86
RSY C FCKR F +AQALGGHMN+HR+D ++ +S + S+ A E+ +H
Sbjct: 46 RSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLSTVATSKVSSSRASTISTQEICSH 105
>Glyma04g13050.1
Length = 95
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKD--KVNKSKPSF 65
RSY C FC++ F +AQALGGHMN+HR+D ++ +S PS
Sbjct: 31 RSYTCSFCRKEFKSAQALGGHMNVHRRDRPRLRQSSPSI 69
>Glyma12g35930.1
Length = 214
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPN 67
RSY C FC++ F +AQALGGHMN+HR+D+ + S P
Sbjct: 42 RSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPPT 80
>Glyma03g31760.1
Length = 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDK 57
R+Y C FCKR F +AQALGGHMN+HR+D+
Sbjct: 7 RNYACSFCKREFKSAQALGGHMNVHRRDR 35
>Glyma13g34450.1
Length = 181
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVN 59
RSY C FC++ F +AQALGGHMN+HR+D+ +
Sbjct: 19 RSYTCSFCRKEFRSAQALGGHMNVHRRDRAS 49
>Glyma02g41740.1
Length = 218
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDK 57
RSY C FC R F +AQALGGHMNIH++D+
Sbjct: 38 RSYSCTFCTRDFKSAQALGGHMNIHQRDR 66
>Glyma17g16690.1
Length = 231
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
T R Y C FC+R F +AQALGGHMN+HR+D+
Sbjct: 29 TTWPPRFYYCSFCRREFRSAQALGGHMNVHRRDRA 63
>Glyma19g33260.1
Length = 235
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 AGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGFYSEVS 84
A + R +EC +C R F T+QALGGH N H++++ + + + D+N YS S
Sbjct: 80 AESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLQSTLISDANAYSFMNYSSNS 139
Query: 85 NHPQGGNNYYANNY-HQVYFP 104
+ G +Y N+Y HQ P
Sbjct: 140 SSAMIG-RFYGNSYSHQQLQP 159