Miyakogusa Predicted Gene

Lj1g3v4469100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4469100.1 Non Chatacterized Hit- tr|I1N9N5|I1N9N5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82,2e-17,UNCHARACTERIZED,NULL,CUFF.32438.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31650.1                                                        94   4e-20
Glyma19g34460.1                                                        94   5e-20
Glyma10g03860.1                                                        88   2e-18
Glyma02g15880.1                                                        87   5e-18
Glyma20g34750.2                                                        83   5e-17
Glyma20g34750.1                                                        83   5e-17
Glyma10g32900.2                                                        77   5e-15
Glyma20g34760.1                                                        76   7e-15
Glyma18g14060.1                                                        53   6e-08

>Glyma03g31650.1 
          Length = 435

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/50 (82%), Positives = 46/50 (92%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VR+K+QLKSH+RFA+AFMTYC LVDNARLY TNALEGPAK+
Sbjct: 319 RRAIMCRRAVRIKSQLKSHRRFAEAFMTYCQLVDNARLYFTNALEGPAKL 368


>Glyma19g34460.1 
          Length = 435

 Score = 93.6 bits (231), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/50 (82%), Positives = 46/50 (92%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VR+K+QLKSH+RFA+AFMTYC LVDNARLY TNALEGPAK+
Sbjct: 319 RRAIMCRRAVRIKSQLKSHRRFAEAFMTYCQLVDNARLYFTNALEGPAKL 368


>Glyma10g03860.1 
          Length = 489

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/50 (78%), Positives = 44/50 (88%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRVK+QL SHKRFA+AF+TYC LVDNARLY TN+LEGP K+
Sbjct: 368 RRAIMCRRAVRVKSQLTSHKRFAEAFLTYCQLVDNARLYNTNSLEGPPKL 417


>Glyma02g15880.1 
          Length = 508

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 43/50 (86%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRVK+QL SHKRFA AF+TYC LVDNARLY TN+LEGP K+
Sbjct: 387 RRAIMCRRAVRVKSQLTSHKRFADAFLTYCQLVDNARLYSTNSLEGPPKL 436


>Glyma20g34750.2 
          Length = 523

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 41/50 (82%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM+ R VRV +QLKSHKRFA AF  YC LVDNARLYCTNA+ GP K+
Sbjct: 394 RRAIMTGRAVRVNSQLKSHKRFANAFPRYCKLVDNARLYCTNAVGGPPKL 443


>Glyma20g34750.1 
          Length = 528

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 41/50 (82%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM+ R VRV +QLKSHKRFA AF  YC LVDNARLYCTNA+ GP K+
Sbjct: 399 RRAIMTGRAVRVNSQLKSHKRFANAFPRYCKLVDNARLYCTNAVGGPPKL 448


>Glyma10g32900.2 
          Length = 337

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/51 (64%), Positives = 41/51 (80%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKVQ 69
           RRAIM+ R VRV +QLKSHKRFA AF  +C LVD+ARLYCTN + GP +++
Sbjct: 206 RRAIMTGRAVRVNSQLKSHKRFANAFPRFCKLVDDARLYCTNDVGGPPQLK 256


>Glyma20g34760.1 
          Length = 452

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/51 (64%), Positives = 41/51 (80%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKVQ 69
           RRAIM+ R VRV +QLKSHKRFA AF  +C LVD+ARLYCTN + GP +++
Sbjct: 324 RRAIMTGRAVRVNSQLKSHKRFANAFPRFCKLVDDARLYCTNDVGGPPQLK 374


>Glyma18g14060.1 
          Length = 29

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 25/29 (86%)

Query: 39 RFAQAFMTYCNLVDNARLYCTNALEGPAK 67
          RFA AF+TYC LVDNARLY TN+LEGP K
Sbjct: 1  RFADAFLTYCQLVDNARLYSTNSLEGPPK 29