Miyakogusa Predicted Gene
- Lj1g3v4450310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4450310.1 tr|I0YVK3|I0YVK3_9CHLO Vacuolar ATP synthase
(Fragment) OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,71.43,4e-19,no
description,NULL; ATP-synt_F,ATPase, V1/A1 complex, subunit F;
SUBFAMILY NOT NAMED,NULL; VACUOLAR,CUFF.32414.1
(77 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g09570.1 148 2e-36
Glyma05g26580.1 148 2e-36
>Glyma08g09570.1
Length = 130
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/77 (93%), Positives = 75/77 (97%)
Query: 1 MANKAQIRTNNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
MAN+ QI TNNSALIAMIADEDTVVGFLLAGVGNVD+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1 MANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFK 60
Query: 61 EFTTREDIAIVLISQYV 77
EFTTRED+AIVLISQYV
Sbjct: 61 EFTTREDVAIVLISQYV 77
>Glyma05g26580.1
Length = 130
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/77 (93%), Positives = 75/77 (97%)
Query: 1 MANKAQIRTNNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
MAN+ QI TNNSALIAMIADEDTVVGFLLAGVGNVD+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1 MANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFK 60
Query: 61 EFTTREDIAIVLISQYV 77
EFTTRED+AIVLISQYV
Sbjct: 61 EFTTREDVAIVLISQYV 77