Miyakogusa Predicted Gene

Lj1g3v4450290.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450290.2 tr|B9GS80|B9GS80_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_816116 PE=4
SV=1,65.15,6e-18,Interferon-induced guanylate-binding protein 1
(GBP1), C-terminal domain,Guanylate-binding protein, ,CUFF.32397.2
         (234 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03660.1                                                       382   e-106
Glyma02g16130.1                                                       324   5e-89
Glyma13g24260.1                                                        58   7e-09
Glyma07g32290.2                                                        58   1e-08
Glyma07g32290.1                                                        58   1e-08
Glyma13g30780.1                                                        55   5e-08

>Glyma10g03660.1 
          Length = 659

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/241 (77%), Positives = 209/241 (86%), Gaps = 9/241 (3%)

Query: 3   WNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVDEALRRVPNSHG---------DKNID 53
           + RVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMV+EALRRVPN+ G              
Sbjct: 229 YGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRRVPNTDGLYQFFQLCMKFTFS 288

Query: 54  MVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRP 113
            VNQIRDSLA+MGDNSTAFSLPQPH+QRTKLCDM+D ELD  YVK+R++LKELVAS+I P
Sbjct: 289 TVNQIRDSLAVMGDNSTAFSLPQPHIQRTKLCDMEDVELDQLYVKRREQLKELVASIITP 348

Query: 114 KIVQGKSLNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSERMATVDL 173
           KIVQGK+LNGKEFVSFLEQILEALNKGEIPSTGSLVE+FNKNILE+CLKLYSE+MA + L
Sbjct: 349 KIVQGKTLNGKEFVSFLEQILEALNKGEIPSTGSLVEVFNKNILEKCLKLYSEKMAKLVL 408

Query: 174 PLSEESLQESHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNALFQNEYKSSK 233
           PL EESLQ +HDRSR E  ++FDQQHFGRHHAKKS MQL+EEI +VYKN + QNEY+SS+
Sbjct: 409 PLPEESLQGAHDRSRDEVTKVFDQQHFGRHHAKKSFMQLDEEIQQVYKNVVLQNEYQSSR 468

Query: 234 L 234
           L
Sbjct: 469 L 469


>Glyma02g16130.1 
          Length = 709

 Score =  324 bits (830), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 161/220 (73%), Positives = 184/220 (83%), Gaps = 13/220 (5%)

Query: 28  QGKSVQEMVDEALRRVPNSHG-------------DKNIDMVNQIRDSLAIMGDNSTAFSL 74
           +GKSVQEMV+EALR VPN+ G                   VNQIRDSLAIMGDNSTAFSL
Sbjct: 300 EGKSVQEMVNEALRHVPNTDGLYYFFQLCIKFTFSTAWFSVNQIRDSLAIMGDNSTAFSL 359

Query: 75  PQPHLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKSLNGKEFVSFLEQIL 134
           PQPH+QRTKLCDMKD ELD  YVK+R++LK+LVAS+I PKIVQGK+LNGKEFVSFLEQIL
Sbjct: 360 PQPHIQRTKLCDMKDVELDQLYVKRREQLKKLVASIITPKIVQGKTLNGKEFVSFLEQIL 419

Query: 135 EALNKGEIPSTGSLVEIFNKNILERCLKLYSERMATVDLPLSEESLQESHDRSRGEAMEM 194
           EALNKGEIPSTGSLVE+FNKNILE+CLKLYSE+MA + LPL E+SLQ +HDRSR E  ++
Sbjct: 420 EALNKGEIPSTGSLVEVFNKNILEKCLKLYSEKMAKLVLPLPEKSLQGAHDRSRDEVTKV 479

Query: 195 FDQQHFGRHHAKKSIMQLEEEINKVYKNALFQNEYKSSKL 234
           FDQQHFGRHHAKKS MQL+EEI +VYKN + QNEY+SS+L
Sbjct: 480 FDQQHFGRHHAKKSFMQLDEEIQQVYKNVVLQNEYQSSRL 519


>Glyma13g24260.1 
          Length = 1060

 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)

Query: 13  FEPAKLLWLIQRDFL-------QGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSLAIM 65
           F P   +WL+ RDF        +  + ++ ++ ALR V  S   K+I   N+IRDS+  +
Sbjct: 205 FSPI-FVWLL-RDFYLDLTEDNRKITPRDYLEIALRPVQGSG--KDIKAKNEIRDSIRAL 260

Query: 66  GDNSTAFSLPQP-----HLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKS 120
             +   F+L +P      LQR     M   +L   + +  D L + V    RPK V    
Sbjct: 261 FPDRECFTLVRPLNNENDLQRLDQISM--DKLRTGFREGLDSLTKFVFERTRPKQVGATM 318

Query: 121 LNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSE-RMATVD--LPLSE 177
           + G   V   E  L+ALN+G +P+  S  +   +    R     ++  M++ D   P  E
Sbjct: 319 MTGPVLVGITESYLKALNEGAVPTISSSWQSVEEAECHRAYDSATDVYMSSFDRSTPPEE 378

Query: 178 ESLQESHDRSRGEAMEMFDQQHFGRHHAKKS 208
            +L+E+H++++ ++M  F+    G   A+K+
Sbjct: 379 VALREAHEQAKQKSMAAFNAIAIGVGSARKT 409


>Glyma07g32290.2 
          Length = 1034

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%)

Query: 13  FEPAKLLWLIQRDFL-------QGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSLAIM 65
           F P   +WL+ RDF        +  + ++ ++ ALR V  S   K+I   N+IRDS+  +
Sbjct: 205 FSPI-FVWLL-RDFYLDLTEDNRKITPRDYLEIALRPVQGS--GKDIKAKNEIRDSIRAL 260

Query: 66  GDNSTAFSLPQP-----HLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKS 120
             +   F+L +P      LQR     M   +L   + +  D L + V    RPK V    
Sbjct: 261 FPDRECFTLVRPLNNENDLQRLDQISM--DKLRTGFREGLDALTKFVFERTRPKQVGATM 318

Query: 121 LNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSE-RMATVDL--PLSE 177
           + G   V   E  L+ALN+G +P+  S  +   +    R     ++  M++ D   P  E
Sbjct: 319 MTGPVLVGITESYLKALNEGAVPTISSSWQSVEEAECHRAYDSATDVYMSSFDRSSPPEE 378

Query: 178 ESLQESHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNAL 224
            +L+E+H++++ ++M  F+    G   A+K+   L   + K +K A 
Sbjct: 379 VALREAHEQAKQKSMAAFNAIAIGVGSARKTYEAL---LLKFFKKAF 422


>Glyma07g32290.1 
          Length = 1060

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%)

Query: 13  FEPAKLLWLIQRDFL-------QGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSLAIM 65
           F P   +WL+ RDF        +  + ++ ++ ALR V  S   K+I   N+IRDS+  +
Sbjct: 205 FSPI-FVWLL-RDFYLDLTEDNRKITPRDYLEIALRPVQGS--GKDIKAKNEIRDSIRAL 260

Query: 66  GDNSTAFSLPQP-----HLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKS 120
             +   F+L +P      LQR     M   +L   + +  D L + V    RPK V    
Sbjct: 261 FPDRECFTLVRPLNNENDLQRLDQISM--DKLRTGFREGLDALTKFVFERTRPKQVGATM 318

Query: 121 LNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSE-RMATVDL--PLSE 177
           + G   V   E  L+ALN+G +P+  S  +   +    R     ++  M++ D   P  E
Sbjct: 319 MTGPVLVGITESYLKALNEGAVPTISSSWQSVEEAECHRAYDSATDVYMSSFDRSSPPEE 378

Query: 178 ESLQESHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNAL 224
            +L+E+H++++ ++M  F+    G   A+K+   L   + K +K A 
Sbjct: 379 VALREAHEQAKQKSMAAFNAIAIGVGSARKTYEAL---LLKFFKKAF 422


>Glyma13g30780.1 
          Length = 1012

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)

Query: 13  FEPAKLLWLIQRDFL-------QGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSLAIM 65
           F P   +WL+ RDF        +  + ++ ++ ALR  P     K+I   N+IRDS+  +
Sbjct: 150 FSPI-FVWLL-RDFYLDLVEDNRKITPRDYLEIALR--PFQGSGKDITAKNEIRDSIRAL 205

Query: 66  GDNSTAFSLPQP-----HLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKS 120
             +   F+L +P      LQR     ++  +L P +    D L + V    RPK V    
Sbjct: 206 FPDRECFTLVRPLNDENDLQRLDQISLE--KLRPEFRSSLDTLTKFVFERARPKQVGATM 263

Query: 121 LNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSER----MATVDL--P 174
           + G   +   E  L+ALN G +P+  S  +   +     C K Y       M++ D   P
Sbjct: 264 MTGPVLIGITESYLDALNHGAVPTISSSWQSVEEA---ECRKAYDSAAEIYMSSFDCTKP 320

Query: 175 LSEESLQESHDRSRGEAMEMFDQQHFG 201
             E +L+E+H+++   +M  F     G
Sbjct: 321 PEEAALREAHEKAVRISMAAFTASAVG 347