Miyakogusa Predicted Gene

Lj1g3v4435530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4435530.1 Non Chatacterized Hit- tr|I1N9I8|I1N9I8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.9,0.00000000005,seg,NULL,
NODE_41709_length_822_cov_38.257908.path2.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31150.1                                                       152   7e-38
Glyma19g34000.1                                                        54   3e-08

>Glyma03g31150.1 
          Length = 166

 Score =  152 bits (385), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 75/96 (78%)

Query: 1   MEGYLNQLSLEYDSVWDTKPSWCQPWXXXXXXXXXXXXSWLVLQSVIVTSFISLLIGAWW 60
           MEGYLN LSLEYDSVWDTKPSWCQPW            SWL+L SVI+TS IS LI AWW
Sbjct: 71  MEGYLNHLSLEYDSVWDTKPSWCQPWTIALTGVSIIAISWLILHSVIITSLISSLICAWW 130

Query: 61  YIFLYSYPKGYSEMIAERRKRVTNGFEDTFGQSKQQ 96
           YIFLYSYPK YS+MIAERR+RVTNG EDTFGQ K Q
Sbjct: 131 YIFLYSYPKAYSDMIAERRERVTNGVEDTFGQKKNQ 166


>Glyma19g34000.1 
          Length = 81

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 19/73 (26%)

Query: 1  MEGYLNQLSLEYDSVWDTKPSW--------------CQPWXXXXXXXXXXXXSWLVLQSV 46
          MEGYL     +YDSVWDTKPS               CQPW            SWL L SV
Sbjct: 13 MEGYL-----DYDSVWDTKPSCKLAWLFILSRILFMCQPWTIALTGVSIIAISWLFLHSV 67

Query: 47 IVTSFISLLIGAW 59
          I+TS IS LI AW
Sbjct: 68 IITSLISSLICAW 80