Miyakogusa Predicted Gene
- Lj1g3v4433190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4433190.1 Non Chatacterized Hit- tr|I1N9H7|I1N9H7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18667
PE,82.23,0,GTP1OBG,GTP binding domain; GTP-BINDING
PROTEIN-RELATED,NULL; MMR_HSR1,GTP binding domain; no
descri,CUFF.32351.1
(374 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g33870.1 617 e-177
Glyma19g33870.2 590 e-169
Glyma03g31040.1 424 e-119
Glyma19g31920.1 108 7e-24
Glyma03g29110.1 106 4e-23
Glyma20g17960.1 82 8e-16
Glyma10g24060.1 80 4e-15
Glyma13g35400.1 76 5e-14
Glyma12g35150.2 76 7e-14
Glyma12g35150.1 70 5e-12
Glyma12g31550.1 58 1e-08
>Glyma19g33870.1
Length = 366
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/377 (83%), Positives = 341/377 (90%), Gaps = 16/377 (4%)
Query: 3 MSVQLSSSSGLWVPNSP----HRVPSRGKPGSPSALAATPPTLSSQPPTIQIVGLRGPSW 58
MSVQLSS LWVPNSP H VP+RG+ + LSSQ PTIQI+G+ GPSW
Sbjct: 1 MSVQLSS---LWVPNSPPIPQHFVPNRGR--------FSASALSSQSPTIQIIGVGGPSW 49
Query: 59 SENGIANPNSNT-FDGCEGENNLWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLR 117
ENG NPN+N FDGC+GE++ WSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQL+
Sbjct: 50 RENGYGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLK 109
Query: 118 LMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNAWAEYFTRNGTKV 177
LMDVVIEVRDGRIPMST+HPQMDLWLGNRKRILVLNREDMIST DRNAWA+YFTRNGTKV
Sbjct: 110 LMDVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWADYFTRNGTKV 169
Query: 178 VFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLK 237
VFSNGQLGMGTMKLGRLAKELAA+VNVKRR+KGLLPRAVRAGIVGYPNVGKSSLINRLLK
Sbjct: 170 VFSNGQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 229
Query: 238 RRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAICDDIGERSYDV 297
RRMCPAAPRPGVTRELRW+RFGKDLELLDSPGILPMRISDQS+AIKLAICDDIGERSYDV
Sbjct: 230 RRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDV 289
Query: 298 TDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEKLALQLFNGDVHQASFRVLS 357
DVAA+LVQML+KLP VG DAL KRYKI+VD + G+ F+EKLA+++FNGDVHQA+FRVL+
Sbjct: 290 ADVAAILVQMLSKLPTVGRDALCKRYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLA 349
Query: 358 DFRKGKFGWTALERPPR 374
DFRKGKFGWTALERPP+
Sbjct: 350 DFRKGKFGWTALERPPK 366
>Glyma19g33870.2
Length = 358
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 301/364 (82%), Positives = 328/364 (90%), Gaps = 16/364 (4%)
Query: 3 MSVQLSSSSGLWVPNSP----HRVPSRGKPGSPSALAATPPTLSSQPPTIQIVGLRGPSW 58
MSVQLSS LWVPNSP H VP+RG+ + LSSQ PTIQI+G+ GPSW
Sbjct: 1 MSVQLSS---LWVPNSPPIPQHFVPNRGR--------FSASALSSQSPTIQIIGVGGPSW 49
Query: 59 SENGIANPNSNT-FDGCEGENNLWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLR 117
ENG NPN+N FDGC+GE++ WSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQL+
Sbjct: 50 RENGYGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLK 109
Query: 118 LMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNAWAEYFTRNGTKV 177
LMDVVIEVRDGRIPMST+HPQMDLWLGNRKRILVLNREDMIST DRNAWA+YFTRNGTKV
Sbjct: 110 LMDVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWADYFTRNGTKV 169
Query: 178 VFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLK 237
VFSNGQLGMGTMKLGRLAKELAA+VNVKRR+KGLLPRAVRAGIVGYPNVGKSSLINRLLK
Sbjct: 170 VFSNGQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 229
Query: 238 RRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAICDDIGERSYDV 297
RRMCPAAPRPGVTRELRW+RFGKDLELLDSPGILPMRISDQS+AIKLAICDDIGERSYDV
Sbjct: 230 RRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDV 289
Query: 298 TDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEKLALQLFNGDVHQASFRVLS 357
DVAA+LVQML+KLP VG DAL KRYKI+VD + G+ F+EKLA+++FNGDVHQA+FRVL+
Sbjct: 290 ADVAAILVQMLSKLPTVGRDALCKRYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLA 349
Query: 358 DFRK 361
DFRK
Sbjct: 350 DFRK 353
>Glyma03g31040.1
Length = 303
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/326 (69%), Positives = 258/326 (79%), Gaps = 24/326 (7%)
Query: 50 IVGLRGPSWSENGIANPNSNT-FDGCEGENNLWSELDTDLYHWTKALRPVQWFPGHIAKA 108
I+G+ GPSW +NG N NSN FDGC+G+++LWSELDTDLYHWTKALRPVQ +
Sbjct: 1 IIGVGGPSWRDNGYGNSNSNNLFDGCQGQSDLWSELDTDLYHWTKALRPVQ------VRQ 54
Query: 109 EKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNAWAE 168
++ E +D + G +T+ + +KRILVLNREDMIST DRNAWA+
Sbjct: 55 SRKGTEGAAQVDGCCDRGAG-----STNSNVHKSSTGKKRILVLNREDMISTADRNAWAD 109
Query: 169 YFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPNVGK 228
YFTRNGTKVVFSNGQLGMGTMKLGRLAKELAA+VNV+RR KGLLPRAV+AGIVGYPNVGK
Sbjct: 110 YFTRNGTKVVFSNGQLGMGTMKLGRLAKELAADVNVRRRTKGLLPRAVQAGIVGYPNVGK 169
Query: 229 SSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAICD 288
SSL+NRLLKRRMCPAAPRPGVTRELRW+RFGKDLELLDSPGILPMRI+DQS+AIKLAICD
Sbjct: 170 SSLVNRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRINDQSAAIKLAICD 229
Query: 289 DIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEKLALQLFNGDV 348
DIGERSYDV DVAA+LVQMLTKLP +G DAL KRYKI VD Q G+T +
Sbjct: 230 DIGERSYDVADVAAILVQMLTKLPTIGKDALCKRYKIGVDCQDGRT----------GRTI 279
Query: 349 HQASFRVLSDFRKGKFGWTALERPPR 374
H+ + + +FRKGKFGWTALERPPR
Sbjct: 280 HREACSL--NFRKGKFGWTALERPPR 303
>Glyma19g31920.1
Length = 377
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 98 VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
+ WFPGH+A A + ++ +L+L D+VIEVRD RIP S+ + + L ++R++ LN++D+
Sbjct: 26 ITWFPGHMAAATRAIRHRLKLADLVIEVRDARIPFSSANADLQPHLSAKRRVVALNKKDL 85
Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
+ + W YF V N M ++ K+L V K + +
Sbjct: 86 ANPNIMHKWTHYFESCNQNCVAINAH-SMSSV------KKLLEVVEFKLKEVICREPTLL 138
Query: 218 AGIVGYPNVGKSSLINRL---------LKRRMCPAA--PRPGVTRELRWIRFGK--DLEL 264
+VG PNVGKS+LIN + ++ +M AA P PGVT+++ + + +
Sbjct: 139 VMVVGVPNVGKSALINSIHQIAKSRFPVQEKMKRAAVGPLPGVTQDIAGFKIAHKPSIYV 198
Query: 265 LDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQML 308
LD+PG+L ISD + +KLA+ + + + +A L+ +L
Sbjct: 199 LDTPGVLVPSISDIETGLKLALAESVKDSVVGEERIAQYLLAVL 242
>Glyma03g29110.1
Length = 377
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 20/208 (9%)
Query: 98 VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
+ WFPGH+A A + ++ +L+L D+VIEVRD RIP+S+ + + L ++R++ LN++D+
Sbjct: 26 ITWFPGHMAAATRAIRHRLKLADLVIEVRDARIPLSSANADLQPHLSAKRRVVALNKKDL 85
Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
+ + W YF V N KL + + V K ++
Sbjct: 86 ANPNIMHKWTHYFETCNQNCVAINAHSKSSVKKLLEVVEFKLKEVICKEPTLLVM----- 140
Query: 218 AGIVGYPNVGKSSLINRL---------LKRRMCPAA--PRPGVTRELRWIRFGK--DLEL 264
+VG PNVGKS+LIN + ++ +M AA P PGVT+++ + + +
Sbjct: 141 --VVGVPNVGKSALINSIHQIAKSRFPVQEKMKRAAVGPLPGVTQDIAGFKIAHKPSIYV 198
Query: 265 LDSPGILPMRISDQSSAIKLAICDDIGE 292
LD+PG+L ISD + +KLA+ + +
Sbjct: 199 LDTPGVLVPSISDIETGLKLALAGSVKD 226
>Glyma20g17960.1
Length = 574
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 20/190 (10%)
Query: 110 KELKEQLRLMDVVIEVRDGRIPMST---THPQMDLWLGNRKR-ILVLNREDMISTEDRNA 165
K+L + + DV++EV D R P+ T +M + G KR +L+LN+ D++ E
Sbjct: 133 KDLVKVIEASDVLLEVLDARDPLGTRCVDIEKMVMKSGPDKRLVLLLNKIDLVPKEALEK 192
Query: 166 WAEYFTRNGTKVVF--------SNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
W +Y V F SN +G L +L K + + +K+ ++
Sbjct: 193 WLKYLREELPTVAFKCSTQQQRSNLSDCLGADTLLKLLKNYSRSHEIKK--------SIT 244
Query: 218 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISD 277
G++G PNVGKSSLIN L + + PG+TR ++ ++ K+++LLD PG++ ++ +
Sbjct: 245 VGLIGLPNVGKSSLINSLKRSHVVNVGSTPGLTRSMQEVQLDKNVKLLDCPGVVMLKSQE 304
Query: 278 QSSAIKLAIC 287
+++ L C
Sbjct: 305 YDASVALKNC 314
>Glyma10g24060.1
Length = 572
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 110 KELKEQLRLMDVVIEVRDGRIPMST---THPQMDLWLGNRKR-ILVLNREDMISTEDRNA 165
K+L + + DV++EV D R P+ T +M + G KR +L+LN+ D++ E
Sbjct: 129 KDLVKVIEASDVLLEVLDARDPLGTRCVDIEKMVMKSGPDKRLVLLLNKIDLVPKEALEK 188
Query: 166 WAEYFTRNGTKVVF--------SNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
W +Y V F SN +G L +L K + + +K+ ++
Sbjct: 189 WLKYLREELPTVAFKCSTQQQRSNLSDCLGADTLIKLLKNYSRSHEIKK--------SIT 240
Query: 218 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISD 277
G++G PNVGKSSLIN L + + PG+TR ++ + K+++LLD PG++ + +
Sbjct: 241 VGLIGLPNVGKSSLINSLKRSHVVNVGSTPGLTRSMQEVHLDKNVKLLDCPGVVMPKSQE 300
Query: 278 QSSAIKLAICDDIGERSYDVTDVAAVL 304
+++ L C I + + V +L
Sbjct: 301 NDASVVLKNCKRIEKLDNPINPVKEIL 327
>Glyma13g35400.1
Length = 549
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 111 ELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNAW 166
EL + + DVV++V D R P T ++ L ++ +L+LN+ D++ W
Sbjct: 206 ELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGW 265
Query: 167 AEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLPRAVRA 218
++ + F N G G++ + RL ++ +A+
Sbjct: 266 LRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRD---------------KQAISV 310
Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
G VGYPNVGKSS+IN L + +C AP PG T+ ++I K + L+D PG++ +
Sbjct: 311 GFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDTE 370
Query: 279 SSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVE- 337
+ + + R ++ D A + ++L + V + L + YKI ++
Sbjct: 371 TDVVLKGVV-----RVTNLKDAADHIGEVLKR---VKKEHLERAYKIKEWDDENDFLLQL 422
Query: 338 -KLALQLFNG---DVHQASFRVLSDFRKGKFGWTALERPPR 374
K + +L G D+ A+ +L D+++G+ + PPR
Sbjct: 423 CKSSGKLLKGGEPDLMTAAKMILHDWQRGRIPFFV--SPPR 461
>Glyma12g35150.2
Length = 549
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 111 ELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNAW 166
EL + + DVV++V D R P T ++ L ++ +L+LN+ D++ W
Sbjct: 206 ELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGW 265
Query: 167 AEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLPRAVRA 218
++ + F N G G++ + RL ++ +A+
Sbjct: 266 LRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRD---------------KQAISV 310
Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
G VGYPNVGKSS+IN L + +C AP PG T+ ++I K + L+D PG++ +
Sbjct: 311 GFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSE 370
Query: 279 SSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKI 325
+ + + R ++ D A + ++L + V + L + YKI
Sbjct: 371 TDVVLKGVV-----RVTNLKDAADHIGEVLKR---VKKEHLERAYKI 409
>Glyma12g35150.1
Length = 554
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 40/232 (17%)
Query: 111 ELKEQLRLMDVVIE-----VRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTE 161
EL + + DVV++ V D R P T ++ L ++ +L+LN+ D++
Sbjct: 206 ELYKVIDSSDVVVQAVESMVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAW 265
Query: 162 DRNAWAEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLP 213
W ++ + F N G G++ + RL ++
Sbjct: 266 ATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRD---------------K 310
Query: 214 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPM 273
+A+ G VGYPNVGKSS+IN L + +C AP PG T+ ++I K + L+D PG++
Sbjct: 311 QAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYH 370
Query: 274 RISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKI 325
++ + + R ++ D A + ++L + V + L + YKI
Sbjct: 371 NNDSETDVVLKGVV-----RVTNLKDAADHIGEVLKR---VKKEHLERAYKI 414
>Glyma12g31550.1
Length = 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 52/218 (23%)
Query: 120 DVVIEVRDGRIPMSTTHPQMDLW---LGNRKRILVL-NREDMISTEDRNAWAEYFTRNGT 175
D+++ V D R P+ P ++ + + + KR L+L N+ D++ R W EYF +
Sbjct: 161 DLLVMVVDSRDPLFYRCPDLEAYAREVDDHKRTLLLVNKADLLPASVREKWVEYFCAHNI 220
Query: 176 KVVFSNGQLGMGTMK-----------------------------LGRLAKELAANVNVKR 206
+F + + ++ L R+ E V ++R
Sbjct: 221 LYIFWSAKAASAAVEGKMLRSPLEADDSGKNNNPDTKIYDRDELLARMQSEAEKIVEMRR 280
Query: 207 RAKGLL-PRAVRA----------------GIVGYPNVGKSSLINRLLKRRMCPAAPRPGV 249
+ P +++ G VGYPNVGKSS IN L+ ++ PG
Sbjct: 281 NSSSDTGPSNIQSSGENVGGSSSSNNVIVGFVGYPNVGKSSTINALVGKKRTGVTSTPGK 340
Query: 250 TRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAIC 287
T+ + + L L D PG++ S SS K+ C
Sbjct: 341 TKHFQTLIISDQLTLCDCPGLVFPSFS--SSRYKMIAC 376