Miyakogusa Predicted Gene

Lj1g3v4433150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4433150.1 Non Chatacterized Hit- tr|B9S429|B9S429_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.55,1e-16,coiled-coil,NULL; seg,NULL,CUFF.32344.1
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33840.1                                                        96   5e-20

>Glyma19g33840.1 
          Length = 260

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 117/269 (43%), Gaps = 31/269 (11%)

Query: 1   MGRKPGSSKNNSDKTTMDKVEDQSIYGKVKSPRASEVENLKARCAPLKILNQSANGVEAP 60
           MGRK  S  ++  +     VE Q   G ++ PRA E +           L     G+ +P
Sbjct: 1   MGRKRASKNSDRVQALPTVVEPQPSNGNIQLPRALESQ-----------LEIPLPGLTSP 49

Query: 61  PVKNSASG-VEAHPAKISPQEQVNRADEGQKKSAKKSKT-----SGVSVRRSERIKSTVG 114
              N   G  E   AK   QEQVN+ D G +K             G SVRRSERIKS+V 
Sbjct: 50  KHPNLLVGRAEMRHAKSPAQEQVNQ-DHGHQKKPPTPAKKKIKFCGASVRRSERIKSSVV 108

Query: 115 PSPASSRAPEYIEDLTASESENDEQDHQXXXXXXXXXXXXXX-----------XXXXNMS 163
             P ++   E +EDLT S+ E DE D Q                             N+ 
Sbjct: 109 NHPNTNCYIEVVEDLTVSDGEKDEADTQLEQVLLAEPEMEFELPLEHEHESEPELADNLG 168

Query: 164 EK-NLNEKVDHTLQXXXXXXXXXXXXXXXXXGPSTLSETPSKA-INFRDLYISSQKQLEA 221
           EK +  EKVD  LQ                       E PS A I+++ +YI SQK++EA
Sbjct: 169 EKKSWKEKVDCALQRIEALDKTVELLKSKVDENIAFCEAPSMASISYKSMYIDSQKKIEA 228

Query: 222 LAEENRLLTGKLENALGKLEVYEKDIRVP 250
           L  EN+ L GKLENALGK+E    +I +P
Sbjct: 229 LTVENQRLNGKLENALGKIEAVCFNINIP 257