Miyakogusa Predicted Gene
- Lj1g3v4432100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4432100.1 tr|Q2LMD6|Q2LMD6_MALDO MYBR5 OS=Malus domestica
PE=2 SV=1,70.13,3e-19,SWI/SNF COMPLEX-RELATED,NULL,CUFF.32339.1
(68 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g29740.1 116 6e-27
Glyma20g30250.1 102 1e-22
Glyma10g37520.1 100 5e-22
Glyma09g24400.1 99 1e-21
Glyma16g03640.1 90 6e-19
Glyma07g07200.1 88 2e-18
Glyma18g47230.1 70 5e-13
Glyma13g19910.3 65 1e-11
Glyma13g19910.1 65 1e-11
Glyma13g19910.2 65 1e-11
Glyma19g36170.1 64 4e-11
Glyma10g05560.1 64 5e-11
Glyma10g05560.3 64 5e-11
Glyma10g05560.2 63 6e-11
Glyma03g33440.1 59 1e-09
Glyma09g29800.2 59 2e-09
Glyma09g29800.1 59 2e-09
Glyma11g33180.1 57 5e-09
Glyma18g05050.1 57 5e-09
Glyma02g40800.1 57 6e-09
Glyma16g34340.1 56 7e-09
Glyma14g39130.1 56 7e-09
Glyma16g01980.4 56 7e-09
Glyma16g01980.3 56 7e-09
Glyma16g01980.2 56 7e-09
Glyma16g01980.1 56 7e-09
Glyma07g05410.3 56 8e-09
Glyma07g05410.1 56 8e-09
Glyma03g42260.4 56 1e-08
Glyma03g42260.3 56 1e-08
Glyma03g42260.2 56 1e-08
Glyma03g42260.1 56 1e-08
Glyma19g45030.1 55 1e-08
Glyma20g08230.1 52 2e-07
>Glyma16g29740.1
Length = 301
Score = 116 bits (290), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 63/74 (85%), Gaps = 6/74 (8%)
Query: 1 MVSKNPNPPEGFCLDPST-MALPGLSPFASVSSAA-----EDAAKKIRKPYTITKSRENW 54
MVSKNPNPPEGF LDPS M LPG+ PFASVS+A EDAAKKIRKPYTITKSRENW
Sbjct: 1 MVSKNPNPPEGFYLDPSGGMPLPGMPPFASVSAATAANSPEDAAKKIRKPYTITKSRENW 60
Query: 55 TEPEHDKFLEALQL 68
TEPEHDKFLEA+QL
Sbjct: 61 TEPEHDKFLEAIQL 74
>Glyma20g30250.1
Length = 306
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 4/72 (5%)
Query: 1 MVSKNPNPPEGFCLDPSTMALPGLSPFASVSSAA----EDAAKKIRKPYTITKSRENWTE 56
MVSKNPNP E F LDPS M+LPG+ PFA+ ++A ED AKK RKPYTITKSRE+WTE
Sbjct: 1 MVSKNPNPSEAFYLDPSGMSLPGILPFAAAATATADSFEDPAKKTRKPYTITKSRESWTE 60
Query: 57 PEHDKFLEALQL 68
PEHDKFLEALQL
Sbjct: 61 PEHDKFLEALQL 72
>Glyma10g37520.1
Length = 354
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 3/71 (4%)
Query: 1 MVSKNPNPPEGFCLDPSTMALPGLSPFASVSS---AAEDAAKKIRKPYTITKSRENWTEP 57
MVSKNPNP E LDPS M+LPG+ PFA+ ++ + ED AKK RKPYTITKSRE+WTEP
Sbjct: 1 MVSKNPNPSEALNLDPSGMSLPGILPFAAAAAAAVSFEDPAKKTRKPYTITKSRESWTEP 60
Query: 58 EHDKFLEALQL 68
EHDKFLEALQL
Sbjct: 61 EHDKFLEALQL 71
>Glyma09g24400.1
Length = 302
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 61/75 (81%), Gaps = 7/75 (9%)
Query: 1 MVSKNPNPPEGFCLDPST-MALPGLSPFASVSSAAEDAA------KKIRKPYTITKSREN 53
MVSKNPNPPEGF LDPS MALPG PFASVS+AA A KKIRKPYTITKSREN
Sbjct: 1 MVSKNPNPPEGFYLDPSGGMALPGKPPFASVSAAAAAANSSEDAAKKIRKPYTITKSREN 60
Query: 54 WTEPEHDKFLEALQL 68
WTEPEHDKFLEA+QL
Sbjct: 61 WTEPEHDKFLEAIQL 75
>Glyma16g03640.1
Length = 332
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 52/76 (68%), Gaps = 8/76 (10%)
Query: 1 MVSKNPNPPEGFCL-DPSTMALPGLSPFASVS-------SAAEDAAKKIRKPYTITKSRE 52
MVS NPNP +GF DPS M LPG++ SA ED KKIRKPYTITKSRE
Sbjct: 1 MVSVNPNPAQGFYFFDPSNMTLPGVNNLPPPPPPAPAAPSAVEDPNKKIRKPYTITKSRE 60
Query: 53 NWTEPEHDKFLEALQL 68
+WTE EHDKFLEALQL
Sbjct: 61 SWTEQEHDKFLEALQL 76
>Glyma07g07200.1
Length = 331
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 8/76 (10%)
Query: 1 MVSKNPNPPEGFCL-DPSTMALPGLSPFASVS-------SAAEDAAKKIRKPYTITKSRE 52
MVS NP+P +GF DPS MALPG++ +A ED +KKIRKPYTITKSRE
Sbjct: 1 MVSVNPSPAQGFYFFDPSNMALPGVNNLPPPPLPAPPSHAAVEDPSKKIRKPYTITKSRE 60
Query: 53 NWTEPEHDKFLEALQL 68
+WTE EHDKFLEALQL
Sbjct: 61 SWTEQEHDKFLEALQL 76
>Glyma18g47230.1
Length = 307
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 40/65 (61%), Gaps = 16/65 (24%)
Query: 5 NPNPPEGF-CLDPSTMALPGLSPFASVSSAAEDAAKKIRKPYTITKSRENWTEPEHDKFL 63
NPNPP+ F DP M ED KK+RKPYTITKSRENWT+ EHDKFL
Sbjct: 7 NPNPPQTFHFFDPFNM---------------EDQNKKVRKPYTITKSRENWTDQEHDKFL 51
Query: 64 EALQL 68
EAL L
Sbjct: 52 EALHL 56
>Glyma13g19910.3
Length = 294
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 31 SSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++A++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 15 AAASDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 52
>Glyma13g19910.1
Length = 295
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 31 SSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++A++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 15 AAASDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 52
>Glyma13g19910.2
Length = 265
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 31 SSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++A++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 15 AAASDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 52
>Glyma19g36170.1
Length = 277
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 31 SSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S++ + KKIRKPYTITKSRE+W+E EHDKFLEALQL
Sbjct: 6 STSTSGSGKKIRKPYTITKSRESWSEEEHDKFLEALQL 43
>Glyma10g05560.1
Length = 294
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 34 AEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 19 SDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 53
>Glyma10g05560.3
Length = 293
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 34 AEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 19 SDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 53
>Glyma10g05560.2
Length = 266
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 34 AEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
++ + KK+RKPYTITKSRE+WTE EHDKFLEALQL
Sbjct: 19 SDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL 53
>Glyma03g33440.1
Length = 244
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 40 KIRKPYTITKSRENWTEPEHDKFLEALQL 68
K+RKPYTITKSRE+W+E EHDKFLEALQL
Sbjct: 1 KVRKPYTITKSRESWSEEEHDKFLEALQL 29
>Glyma09g29800.2
Length = 466
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 34 AEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
AE+ A K+RKPYTITK RE WTE EH KFLEAL+L
Sbjct: 29 AENVAPKVRKPYTITKQREKWTEEEHQKFLEALKL 63
>Glyma09g29800.1
Length = 466
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 34 AEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
AE+ A K+RKPYTITK RE WTE EH KFLEAL+L
Sbjct: 29 AENVAPKVRKPYTITKQREKWTEEEHQKFLEALKL 63
>Glyma11g33180.1
Length = 287
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 35/61 (57%)
Query: 8 PPEGFCLDPSTMALPGLSPFASVSSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQ 67
PPEG + S+ S D A K+RKPYTITK RE WT+ EH KFLEAL+
Sbjct: 16 PPEGGGVSLSSGHSVTHIQLNDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALK 75
Query: 68 L 68
L
Sbjct: 76 L 76
>Glyma18g05050.1
Length = 361
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 28/37 (75%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S D A K+RKPYTITK RE WT+ EH KFLEAL+L
Sbjct: 41 SCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKL 77
>Glyma02g40800.1
Length = 436
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 23 GLSPFASVS-----SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
G+ P A + S D A K+RKPYTITK RE WT+ EH KFLEAL+L
Sbjct: 27 GVHPVADIPLHDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKL 77
>Glyma16g34340.1
Length = 477
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 27 FASVSSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
A + S + K+RKPYTITK RE WTE EH KFLEAL+L
Sbjct: 32 VAHIPSVGNNQTPKVRKPYTITKQREKWTEEEHQKFLEALKL 73
>Glyma14g39130.1
Length = 436
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 29/43 (67%)
Query: 26 PFASVSSAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
P S D A K+RKPYTITK RE WT+ EH KFLEAL+L
Sbjct: 35 PLHDQLSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKL 77
>Glyma16g01980.4
Length = 750
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma16g01980.3
Length = 750
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma16g01980.2
Length = 750
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma16g01980.1
Length = 750
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma07g05410.3
Length = 770
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma07g05410.1
Length = 770
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma03g42260.4
Length = 748
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma03g42260.3
Length = 748
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma03g42260.2
Length = 748
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma03g42260.1
Length = 748
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma19g45030.1
Length = 749
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 32 SAAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQL 68
S+ E+ K RKPYTITK RE WTE EH++FLEAL+L
Sbjct: 5 SSGEEVLIKTRKPYTITKQRERWTEEEHNRFLEALKL 41
>Glyma20g08230.1
Length = 258
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 41 IRKPYTITKSRENWTEPEHDKFLEALQL 68
+RKPYTITK RE WT EH KFLEAL+L
Sbjct: 201 VRKPYTITKQRERWTNEEHKKFLEALKL 228